@COMMENT
LIGANDBOX_ID = D02506-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02506
NAME = Phenoxymethylpenicillin_benzathine_(JAN)_Penicillin_V_benzathine_tetrahydrate
MOLECULAR_FORMULA = C16H18N2O5S
MOLECULAR_WEIGHT = 350.394
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 95.9400
HOMO = -4.5953
LUMO = 1.9372
mLOGD = 0.296
mLOGS = -2.360
mLOGPA = -5.403
@MOLECULE
D02506-03
41 43 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.0716 0.6621 0.0001 C.3 1 LGD 0.0503
2 C2 0.2720 2.0112 -0.6964 C.2 1 LGD 0.6881
3 N1 -1.0351 2.4526 -0.6228 N.am 1 LGD -0.4391
4 C3 -1.5236 1.2428 0.0578 C.3 1 LGD 0.1499
5 C4 -1.5292 3.7733 -0.1698 C.3 1 LGD -0.0527
6 C5 -2.7145 3.4945 0.8011 C.3 1 LGD 0.0969
7 S1 -2.2375 1.9165 1.6335 S.3 1 LGD -0.3999
8 C6 -4.0254 3.2602 0.0005 C.3 1 LGD -0.0752
9 C7 -2.9511 4.6065 1.8601 C.3 1 LGD -0.0752
10 C8 -0.4022 4.6362 0.4533 C.2 1 LGD 0.9341
11 O1 -0.2304 5.7402 -0.0335 O.co2 1 LGD -0.8041
12 O2 0.2406 4.1695 1.3799 O.co2 1 LGD -0.8041
13 N2 0.0288 -0.4794 -0.9223 N.am 1 LGD -0.5934
14 C9 1.1637 -1.2729 -0.9917 C.2 1 LGD 0.6218
15 O3 1.2326 2.6227 -1.1311 O.2 1 LGD -0.5373
16 O4 2.1052 -1.0427 -0.2507 O.2 1 LGD -0.5545
17 C10 1.1707 -2.4223 -2.0115 C.3 1 LGD 0.0827
18 O5 2.3695 -3.2238 -1.9222 O.3 1 LGD -0.3297
19 C11 2.6512 -4.0799 -0.8725 C.ar 1 LGD 0.1611
20 C12 1.7455 -4.3026 0.1886 C.ar 1 LGD -0.1737
21 C13 2.0841 -5.1864 1.2268 C.ar 1 LGD -0.0982
22 C14 3.3194 -5.8529 1.2119 C.ar 1 LGD -0.1711
23 C15 4.2199 -5.6364 0.1575 C.ar 1 LGD -0.0982
24 C16 3.8852 -4.7526 -0.8812 C.ar 1 LGD -0.1737
25 H1 0.4111 0.4922 0.9684 H 1 LGD 0.1347
26 H2 -2.2986 0.7034 -0.4931 H 1 LGD 0.0668
27 H3 -1.9019 4.3225 -1.0438 H 1 LGD 0.0684
28 H4 -3.8963 2.4944 -0.7743 H 1 LGD 0.0374
29 H5 -4.3487 4.1848 -0.4946 H 1 LGD 0.0374
30 H6 -4.8345 2.9314 0.6649 H 1 LGD 0.0374
31 H7 -3.8462 4.3899 2.4567 H 1 LGD 0.0374
32 H8 -3.0945 5.5815 1.3768 H 1 LGD 0.0374
33 H9 -2.1082 4.6887 2.5571 H 1 LGD 0.0374
34 H10 -0.7433 -0.6781 -1.5416 H 1 LGD 0.3064
35 H11 1.1061 -1.9740 -3.0105 H 1 LGD 0.0680
36 H12 0.2779 -3.0427 -1.8657 H 1 LGD 0.0680
37 H13 0.7839 -3.8014 0.2243 H 1 LGD 0.1382
38 H14 1.3880 -5.3547 2.0436 H 1 LGD 0.1287
39 H15 3.5782 -6.5360 2.0158 H 1 LGD 0.1247
40 H16 5.1758 -6.1523 0.1450 H 1 LGD 0.1287
41 H17 4.5851 -4.5874 -1.6953 H 1 LGD 0.1382
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 1 4 1
5 3 5 1
6 5 6 1
7 6 7 1
8 4 7 1
9 6 8 1
10 6 9 1
11 5 10 1
12 10 11 1
13 10 12 2
14 1 13 1
15 13 14 am
16 2 15 2
17 14 16 2
18 14 17 1
19 17 18 1
20 18 19 1
21 19 20 ar
22 20 21 ar
23 21 22 ar
24 22 23 ar
25 23 24 ar
26 19 24 ar
27 1 25 1
28 4 26 1
29 5 27 1
30 8 28 1
31 8 29 1
32 8 30 1
33 9 31 1
34 9 32 1
35 9 33 1
36 13 34 1
37 17 35 1
38 17 36 1
39 20 37 1
40 21 38 1
41 22 39 1
42 23 40 1
43 24 41 1