@COMMENT
LIGANDBOX_ID = D02506-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02506
NAME = Phenoxymethylpenicillin_benzathine_(JAN)_Penicillin_V_benzathine_tetrahydrate
MOLECULAR_FORMULA = C16H18N2O5S
MOLECULAR_WEIGHT = 350.394
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 95.9400
HOMO = -4.5953
LUMO = 1.9372
mLOGD = 0.296
mLOGS = -2.360
mLOGPA = -5.403
@MOLECULE
D02506-04
41 43 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.5776 0.1435 -0.2015 C.3 1 LGD 0.0458
2 C2 1.2952 1.2997 -0.9516 C.2 1 LGD 0.6593
3 N1 1.4932 0.5331 -2.0822 N.am 1 LGD -0.3769
4 C3 1.0305 -0.7048 -1.4326 C.3 1 LGD 0.1549
5 C4 2.7579 0.4853 -2.8376 C.3 1 LGD -0.0612
6 C5 3.2094 -1.0005 -2.9140 C.3 1 LGD 0.1106
7 S1 2.5814 -1.7183 -1.3371 S.3 1 LGD -0.4835
8 C6 2.5623 -1.7784 -4.0945 C.3 1 LGD -0.0698
9 C7 4.7512 -1.1316 -2.9606 C.3 1 LGD -0.0698
10 C8 2.6402 1.1858 -4.2073 C.2 1 LGD 0.9524
11 O1 3.6332 1.7680 -4.6075 O.co2 1 LGD -0.8083
12 O2 1.5676 1.1441 -4.7875 O.co2 1 LGD -0.8083
13 N2 -0.8820 0.3155 -0.1540 N.am 1 LGD -0.5848
14 C9 -1.5174 0.8903 0.9358 C.2 1 LGD 0.6237
15 O3 1.7083 2.4291 -0.7544 O.2 1 LGD -0.5616
16 O4 -0.8498 1.3240 1.8604 O.2 1 LGD -0.5644
17 C10 -3.0528 0.9384 0.9244 C.3 1 LGD 0.0838
18 O5 -3.5906 1.4721 2.1546 O.3 1 LGD -0.3291
19 C11 -3.5590 0.8054 3.3666 C.ar 1 LGD 0.1612
20 C12 -3.0562 -0.5085 3.4973 C.ar 1 LGD -0.1741
21 C13 -3.0511 -1.1366 4.7541 C.ar 1 LGD -0.0985
22 C14 -3.5479 -0.4639 5.8815 C.ar 1 LGD -0.1714
23 C15 -4.0518 0.8398 5.7542 C.ar 1 LGD -0.0985
24 C16 -4.0570 1.4710 4.4998 C.ar 1 LGD -0.1741
25 H1 1.0149 -0.1452 0.7600 H 1 LGD 0.1135
26 H2 0.2600 -1.2473 -1.9870 H 1 LGD 0.0915
27 H3 3.5062 1.0429 -2.2593 H 1 LGD 0.0634
28 H4 1.4722 -1.6531 -4.1078 H 1 LGD 0.0421
29 H5 2.9552 -1.4329 -5.0592 H 1 LGD 0.0421
30 H6 2.7752 -2.8518 -4.0135 H 1 LGD 0.0421
31 H7 5.0533 -2.1865 -2.9446 H 1 LGD 0.0421
32 H8 5.1552 -0.6755 -3.8734 H 1 LGD 0.0421
33 H9 5.2136 -0.6350 -2.0981 H 1 LGD 0.0421
34 H10 -1.4408 -0.0171 -0.9264 H 1 LGD 0.3188
35 H11 -3.3560 1.5766 0.0856 H 1 LGD 0.0721
36 H12 -3.4443 -0.0691 0.7362 H 1 LGD 0.0721
37 H13 -2.6673 -1.0517 2.6423 H 1 LGD 0.1382
38 H14 -2.6616 -2.1458 4.8540 H 1 LGD 0.1287
39 H15 -3.5429 -0.9521 6.8518 H 1 LGD 0.1248
40 H16 -4.4371 1.3606 6.6261 H 1 LGD 0.1287
41 H17 -4.4472 2.4803 4.4056 H 1 LGD 0.1382
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 1 4 1
5 3 5 1
6 5 6 1
7 6 7 1
8 4 7 1
9 6 8 1
10 6 9 1
11 5 10 1
12 10 11 1
13 10 12 2
14 1 13 1
15 13 14 am
16 2 15 2
17 14 16 2
18 14 17 1
19 17 18 1
20 18 19 1
21 19 20 ar
22 20 21 ar
23 21 22 ar
24 22 23 ar
25 23 24 ar
26 19 24 ar
27 1 25 1
28 4 26 1
29 5 27 1
30 8 28 1
31 8 29 1
32 8 30 1
33 9 31 1
34 9 32 1
35 9 33 1
36 13 34 1
37 17 35 1
38 17 36 1
39 20 37 1
40 21 38 1
41 22 39 1
42 23 40 1
43 24 41 1