@COMMENT
LIGANDBOX_ID = D02543-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02543
NAME = Amikacin_(USP/INN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.3450
LUMO = -10.6596
mLOGPA = -7.435
mLOGS = 4.854
mLOGD = -4.343
@MOLECULE
D02543-01
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 18.7120 -17.1250 -0.5730 C.3 1 LGD 0.1554
2 C2 19.2830 -15.6820 -0.5530 C.3 1 LGD 0.0997
3 C3 20.2330 -15.5080 0.6640 C.3 1 LGD 0.0240
4 C4 21.3260 -16.6090 0.6690 C.3 1 LGD 0.1010
5 C5 20.7140 -18.0270 0.5120 C.3 1 LGD 0.3102
6 O1 19.8320 -18.0440 -0.6320 O.3 1 LGD -0.3836
7 O2 19.9620 -18.3650 1.6940 O.3 1 LGD -0.4887
8 C6 19.6630 -19.7740 1.8410 C.3 1 LGD 0.1157
9 C7 20.2970 -20.2680 3.1670 C.3 1 LGD 0.1142
10 C8 19.6120 -19.6180 4.3960 C.3 1 LGD -0.1150
11 C9 18.0770 -19.8420 4.4100 C.3 1 LGD 0.0845
12 C10 17.3930 -19.4290 3.0620 C.3 1 LGD 0.1454
13 C11 18.1230 -19.9880 1.7990 C.3 1 LGD 0.1337
14 O3 17.3630 -17.9860 2.9450 O.3 1 LGD -0.4433
15 C12 16.4760 -17.2880 3.8480 C.3 1 LGD 0.2918
16 C13 17.8020 -17.3970 -1.7960 C.3 1 LGD 0.1522
17 O4 17.2490 -18.7130 -1.7310 O.3 1 LGD -0.6238
18 O5 18.2190 -14.7290 -0.4980 O.3 1 LGD -0.5543
19 N1 20.8620 -14.1760 0.6350 N.4 1 LGD -0.8125
20 O6 22.0970 -16.5490 1.8720 O.3 1 LGD -0.5992
21 N2 21.7320 -19.9460 3.1690 N.am 1 LGD -0.6158
22 C14 22.6830 -20.7280 3.8100 C.2 1 LGD 0.6189
23 C15 24.1580 -20.3090 3.7240 C.3 1 LGD 0.0955
24 C16 24.3830 -18.8880 4.3010 C.3 1 LGD -0.0969
25 C17 25.8800 -18.4980 4.3400 C.3 1 LGD 0.0921
26 N3 26.0430 -17.1720 4.9490 N.4 1 LGD -0.8196
27 O7 17.2400 -16.7450 4.9480 O.3 1 LGD -0.4585
28 C18 18.3070 -15.8340 4.5830 C.3 1 LGD 0.1281
29 C19 17.6700 -14.5990 3.8870 C.3 1 LGD 0.1301
30 C20 16.7930 -15.0290 2.6840 C.3 1 LGD 0.0907
31 C21 15.7790 -16.1250 3.0960 C.3 1 LGD 0.0979
32 C22 19.0700 -15.4370 5.8740 C.3 1 LGD 0.0938
33 N4 19.6950 -16.6080 6.5070 N.4 1 LGD -0.8134
34 O8 18.6880 -13.7020 3.4420 O.3 1 LGD -0.6501
35 O9 16.0970 -13.8940 2.1640 O.3 1 LGD -0.5783
36 O10 15.0990 -16.6310 1.9450 O.3 1 LGD -0.5393
37 O11 22.3410 -21.7290 4.4160 O.2 1 LGD -0.5240
38 O12 24.5820 -20.3700 2.3590 O.3 1 LGD -0.5935
39 N5 17.7880 -21.2540 4.7120 N.4 1 LGD -0.8108
40 O13 17.8510 -21.3860 1.6670 O.3 1 LGD -0.6227
41 H1 18.1270 -17.2920 0.3400 H 1 LGD 0.0658
42 H2 19.8610 -15.5320 -1.4740 H 1 LGD 0.0893
43 H3 19.6470 -15.6040 1.5860 H 1 LGD 0.1178
44 H4 21.9880 -16.4380 -0.1900 H 1 LGD 0.1356
45 H5 21.5250 -18.7510 0.3660 H 1 LGD 0.1287
46 H6 20.1100 -20.3420 1.0140 H 1 LGD 0.1103
47 H7 20.1670 -21.3560 3.2220 H 1 LGD 0.1073
48 H8 20.0530 -20.0110 5.3210 H 1 LGD 0.0547
49 H9 19.8140 -18.5400 4.3910 H 1 LGD 0.0547
50 H10 17.6540 -19.2480 5.2300 H 1 LGD 0.0977
51 H11 16.3610 -19.8040 3.0530 H 1 LGD 0.1006
52 H12 17.7250 -19.4700 0.9180 H 1 LGD 0.1198
53 H13 15.7110 -17.9740 4.2330 H 1 LGD 0.1254
54 H14 16.9910 -16.6570 -1.8180 H 1 LGD 0.0700
55 H15 18.3900 -17.2790 -2.7150 H 1 LGD 0.0700
56 H16 16.7790 -18.8770 -2.5680 H 1 LGD 0.4604
57 H17 18.6050 -13.8500 -0.6660 H 1 LGD 0.4181
58 H18 21.5310 -14.1180 1.3900 H 1 LGD 0.4696
59 H19 20.1410 -13.4690 0.6610 H 1 LGD 0.4696
60 H20 21.5180 -16.8700 2.5870 H 1 LGD 0.4080
61 H21 22.0420 -19.1240 2.6720 H 1 LGD 0.3164
62 H22 24.7340 -21.0260 4.3230 H 1 LGD 0.1140
63 H23 23.8270 -18.1510 3.7060 H 1 LGD 0.0489
64 H24 23.9750 -18.8490 5.3190 H 1 LGD 0.0489
65 H25 26.4400 -19.2380 4.9260 H 1 LGD 0.1430
66 H26 26.2880 -18.4840 3.3210 H 1 LGD 0.1430
67 H27 25.7300 -17.2040 5.9090 H 1 LGD 0.4659
68 H28 25.5810 -16.4810 4.3750 H 1 LGD 0.4659
69 H29 19.0050 -16.3220 3.8900 H 1 LGD 0.0448
70 H30 17.0260 -14.0900 4.6160 H 1 LGD 0.1071
71 H31 17.4470 -15.4480 1.9120 H 1 LGD 0.0290
72 H32 15.0490 -15.6750 3.7810 H 1 LGD 0.1446
73 H33 19.8500 -14.7060 5.6280 H 1 LGD 0.1441
74 H34 18.3740 -14.9690 6.5810 H 1 LGD 0.1441
75 H35 20.3060 -17.0610 5.8440 H 1 LGD 0.4591
76 H36 20.1400 -16.3240 7.3680 H 1 LGD 0.4591
77 H37 18.2480 -13.0480 2.8680 H 1 LGD 0.4667
78 H38 15.4930 -14.2260 1.4750 H 1 LGD 0.4656
79 H39 15.6970 -17.2770 1.5270 H 1 LGD 0.4128
80 H40 24.4060 -21.2720 2.0380 H 1 LGD 0.4624
81 H41 16.7940 -21.3710 4.8450 H 1 LGD 0.4780
82 H42 18.1830 -21.8310 3.9810 H 1 LGD 0.4780
83 H43 17.9510 -21.6160 0.7260 H 1 LGD 0.4810
84 H44 21.4234 -14.0989 -0.1889 H 1 LGD 0.4696
85 H45 27.0185 -16.9831 5.0615 H 1 LGD 0.4659
86 H46 18.9987 -17.3115 6.6493 H 1 LGD 0.4591
87 H47 18.1642 -21.4783 5.6110 H 1 LGD 0.4780
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1