@COMMENT
LIGANDBOX_ID = D02543-10
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02543
NAME = Amikacin_(USP/INN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.3450
LUMO = -10.6596
mLOGPA = -7.435
mLOGS = 4.854
mLOGD = -4.343
@MOLECULE
D02543-10
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.0836 0.5995 -3.4153 C.3 1 LGD 0.1375
2 C2 -0.4682 2.0162 -3.2513 C.3 1 LGD 0.0967
3 C3 0.3593 2.0784 -1.9459 C.3 1 LGD 0.0699
4 C4 1.4241 0.9568 -1.9229 C.3 1 LGD 0.0945
5 C5 0.7830 -0.4307 -2.1852 C.3 1 LGD 0.3140
6 O1 0.0015 -0.3647 -3.4024 O.3 1 LGD -0.3704
7 O2 -0.0743 -0.7777 -1.0774 O.3 1 LGD -0.4745
8 C6 -0.2845 -2.1950 -0.8641 C.3 1 LGD 0.1491
9 C7 0.4397 -2.6159 0.4440 C.3 1 LGD 0.1027
10 C8 -0.1857 -1.9248 1.6858 C.3 1 LGD -0.1201
11 C9 -1.7123 -2.1745 1.8020 C.3 1 LGD 0.0842
12 C10 -2.4782 -1.8496 0.4833 C.3 1 LGD 0.1061
13 C11 -1.8091 -2.4984 -0.7649 C.3 1 LGD 0.1586
14 O3 -2.5160 -0.4198 0.2851 O.3 1 LGD -0.4130
15 C12 -3.3599 0.3314 1.1806 C.3 1 LGD 0.2846
16 C13 -1.8559 0.4454 -4.7511 C.3 1 LGD 0.1569
17 O4 -2.4057 -0.8648 -4.8757 O.3 1 LGD -0.5936
18 O5 -1.4894 3.0144 -3.2193 O.3 1 LGD -0.6043
19 N1 1.0134 3.3953 -1.8285 N.4 1 LGD -0.8099
20 O6 2.1023 0.9527 -0.6670 O.3 1 LGD -0.6100
21 N2 1.8760 -2.3091 0.3791 N.am 1 LGD -0.6115
22 C14 2.8222 -3.0338 1.0929 C.2 1 LGD 0.6240
23 C15 4.3019 -2.6365 0.9874 C.3 1 LGD 0.0962
24 C16 4.5666 -1.2399 1.6000 C.3 1 LGD -0.1017
25 C17 6.0696 -0.8899 1.5898 C.3 1 LGD 0.1022
26 N3 6.2710 0.4414 2.1922 N.4 1 LGD -0.8204
27 O7 -2.5596 0.8761 2.2550 O.3 1 LGD -0.4679
28 C18 -1.4845 1.7587 1.8508 C.3 1 LGD 0.1256
29 C19 -2.0971 2.9906 1.1386 C.3 1 LGD 0.1299
30 C20 -2.9826 2.5501 -0.0528 C.3 1 LGD 0.0925
31 C21 -4.0239 1.4957 0.3990 C.3 1 LGD 0.0999
32 C22 -0.7111 2.1654 3.1225 C.3 1 LGD 0.1029
33 N4 -0.1755 0.9606 3.7855 N.4 1 LGD -0.8209
34 O8 -1.0598 3.8562 0.6770 O.3 1 LGD -0.6596
35 O9 -3.6508 3.6844 -0.6034 O.3 1 LGD -0.5782
36 O10 -4.7240 0.9793 -0.7339 O.3 1 LGD -0.5447
37 O11 2.4687 -3.9757 1.7818 O.2 1 LGD -0.5380
38 O12 4.7053 -2.6598 -0.3843 O.3 1 LGD -0.5970
39 N5 -1.9343 -3.5883 2.1655 N.4 1 LGD -0.8213
40 O13 -2.4866 -2.1030 -1.9571 O.3 1 LGD -0.5355
41 H1 -1.7728 0.4068 -2.5831 H 1 LGD 0.0827
42 H2 0.2013 2.2050 -4.1008 H 1 LGD 0.0781
43 H3 -0.3118 1.9424 -1.0958 H 1 LGD 0.1187
44 H4 2.1482 1.1477 -2.7257 H 1 LGD 0.1340
45 H5 1.5758 -1.1804 -2.2947 H 1 LGD 0.1196
46 H6 0.1274 -2.7731 -1.7022 H 1 LGD 0.1227
47 H7 0.3154 -3.7013 0.5506 H 1 LGD 0.0886
48 H8 0.3120 -2.2740 2.5996 H 1 LGD 0.0573
49 H9 -0.0011 -0.8463 1.6275 H 1 LGD 0.0573
50 H10 -2.1137 -1.5568 2.6075 H 1 LGD 0.1048
51 H11 -3.5057 -2.2281 0.5607 H 1 LGD 0.0844
52 H12 -1.9074 -3.5862 -0.6594 H 1 LGD 0.0499
53 H13 -4.1422 -0.3173 1.5930 H 1 LGD 0.1236
54 H14 -2.6648 1.1858 -4.7890 H 1 LGD 0.0522
55 H15 -1.1763 0.6473 -5.5887 H 1 LGD 0.0522
56 H16 -2.8660 -0.9124 -5.7320 H 1 LGD 0.4485
57 H17 -1.5413 3.4176 -4.1044 H 1 LGD 0.4645
58 H18 1.5545 3.4260 -0.9758 H 1 LGD 0.4681
59 H19 0.3054 4.1161 -1.8051 H 1 LGD 0.4681
60 H20 1.4813 0.5725 -0.0203 H 1 LGD 0.4072
61 H21 2.1910 -1.5490 -0.2060 H 1 LGD 0.3267
62 H22 4.8782 -3.3806 1.5532 H 1 LGD 0.1138
63 H23 4.0040 -0.4762 1.0478 H 1 LGD 0.0526
64 H24 4.1992 -1.2248 2.6344 H 1 LGD 0.0526
65 H25 6.6277 -1.6354 2.1610 H 1 LGD 0.1421
66 H26 6.4409 -0.8850 0.5623 H 1 LGD 0.1421
67 H27 5.9350 0.4403 3.1453 H 1 LGD 0.4648
68 H28 5.7657 1.1365 1.6607 H 1 LGD 0.4648
69 H29 -0.8027 1.2422 1.1633 H 1 LGD 0.0465
70 H30 -2.7283 3.5270 1.8597 H 1 LGD 0.1037
71 H31 -2.3411 2.0928 -0.8153 H 1 LGD 0.0374
72 H32 -4.7387 1.9854 1.0731 H 1 LGD 0.1412
73 H33 0.1094 2.8363 2.8589 H 1 LGD 0.1418
74 H34 -1.3845 2.6855 3.8073 H 1 LGD 0.1418
75 H35 0.4736 0.4905 3.1715 H 1 LGD 0.4597
76 H36 0.2962 1.2199 4.6412 H 1 LGD 0.4597
77 H37 -1.5060 4.5935 0.2212 H 1 LGD 0.4741
78 H38 -4.3151 3.3460 -1.2308 H 1 LGD 0.4655
79 H39 -4.1182 0.3644 -1.1867 H 1 LGD 0.4225
80 H40 4.6404 -3.5798 -0.6986 H 1 LGD 0.4646
81 H41 -2.9228 -3.7649 2.2811 H 1 LGD 0.4740
82 H42 -1.5683 -4.1961 1.4471 H 1 LGD 0.4740
83 H43 -3.2194 -2.7238 -2.1149 H 1 LGD 0.4494
84 H44 1.6232 3.5502 -2.6186 H 1 LGD 0.4681
85 H45 7.2551 0.6732 2.1892 H 1 LGD 0.4648
86 H46 -0.9417 0.3376 4.0016 H 1 LGD 0.4597
87 H47 -1.4621 -3.7930 3.0355 H 1 LGD 0.4740
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1