@COMMENT
LIGANDBOX_ID = D02543-14
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02543
NAME = Amikacin_(USP/INN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.3450
LUMO = -10.6596
mLOGPA = -7.435
mLOGS = 4.854
mLOGD = -4.343
@MOLECULE
D02543-14
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.9906 0.5514 -3.4601 C.3 1 LGD 0.1277
2 C2 -0.3348 1.9608 -3.4502 C.3 1 LGD 0.1088
3 C3 0.4878 2.1256 -2.1482 C.3 1 LGD 0.0631
4 C4 1.5242 0.9851 -2.0144 C.3 1 LGD 0.0999
5 C5 0.8670 -0.4109 -2.1825 C.3 1 LGD 0.3082
6 O1 0.0772 -0.4256 -3.3942 O.3 1 LGD -0.3858
7 O2 0.0123 -0.6956 -1.0540 O.3 1 LGD -0.4749
8 C6 -0.2755 -2.1012 -0.8697 C.3 1 LGD 0.1172
9 C7 0.3903 -2.5757 0.4501 C.3 1 LGD 0.1081
10 C8 -0.2843 -1.9292 1.6855 C.3 1 LGD -0.1140
11 C9 -1.8083 -2.2023 1.7284 C.3 1 LGD 0.0869
12 C10 -2.5284 -1.7871 0.4060 C.3 1 LGD 0.1377
13 C11 -1.8170 -2.3239 -0.8760 C.3 1 LGD 0.1395
14 O3 -2.5840 -0.3488 0.3230 O.3 1 LGD -0.4106
15 C12 -3.4049 0.3047 1.3194 C.3 1 LGD 0.2971
16 C13 -1.8269 0.2692 -4.7310 C.3 1 LGD 0.1540
17 O4 -2.4268 -1.0237 -4.6534 O.3 1 LGD -0.6135
18 O5 -1.3195 2.9932 -3.5323 O.3 1 LGD -0.6115
19 N1 1.1766 3.4306 -2.1436 N.4 1 LGD -0.8130
20 O6 2.1835 1.0660 -0.7512 O.3 1 LGD -0.6085
21 N2 1.8260 -2.2595 0.4429 N.am 1 LGD -0.6140
22 C14 2.7620 -3.0129 1.1383 C.2 1 LGD 0.6223
23 C15 4.2452 -2.6265 1.0387 C.3 1 LGD 0.0944
24 C16 4.5160 -1.2240 1.6361 C.3 1 LGD -0.1010
25 C17 6.0192 -0.8752 1.6128 C.3 1 LGD 0.1016
26 N3 6.2246 0.4627 2.1990 N.4 1 LGD -0.8206
27 O7 -2.5547 0.8471 2.3549 O.3 1 LGD -0.4759
28 C18 -1.5952 1.8425 1.9210 C.3 1 LGD 0.1342
29 C19 -2.3750 3.0636 1.3575 C.3 1 LGD 0.0954
30 C20 -3.3417 2.6450 0.2152 C.3 1 LGD 0.0846
31 C21 -4.2301 1.4641 0.6911 C.3 1 LGD 0.1464
32 C22 -0.7460 2.2315 3.1498 C.3 1 LGD 0.0997
33 N4 -0.1230 1.0245 3.7274 N.4 1 LGD -0.8198
34 O8 -1.4735 4.0788 0.9072 O.3 1 LGD -0.6423
35 O9 -2.6039 2.2569 -0.9415 O.3 1 LGD -0.6123
36 O10 -5.0484 0.9860 -0.3757 O.3 1 LGD -0.5358
37 O11 2.3982 -3.9683 1.8027 O.2 1 LGD -0.5324
38 O12 4.6548 -2.6669 -0.3310 O.3 1 LGD -0.6002
39 N5 -2.0324 -3.6396 1.9738 N.4 1 LGD -0.8190
40 O13 -2.0741 -3.7255 -0.9956 O.3 1 LGD -0.6327
41 H1 -1.6474 0.4480 -2.5874 H 1 LGD 0.0889
42 H2 0.3446 2.0354 -4.3095 H 1 LGD 0.0789
43 H3 -0.1899 2.0825 -1.2934 H 1 LGD 0.1304
44 H4 2.2658 1.0989 -2.8159 H 1 LGD 0.1306
45 H5 1.6566 -1.1693 -2.2498 H 1 LGD 0.1215
46 H6 0.1517 -2.6825 -1.6983 H 1 LGD 0.1089
47 H7 0.2665 -3.6646 0.5121 H 1 LGD 0.1008
48 H8 0.1812 -2.3033 2.6064 H 1 LGD 0.0539
49 H9 -0.1134 -0.8464 1.6660 H 1 LGD 0.0539
50 H10 -2.2423 -1.6500 2.5637 H 1 LGD 0.1019
51 H11 -3.5553 -2.1757 0.4182 H 1 LGD 0.1001
52 H12 -2.2410 -1.8078 -1.7474 H 1 LGD 0.1241
53 H13 -4.0999 -0.4196 1.7610 H 1 LGD 0.1174
54 H14 -2.6105 1.0313 -4.8269 H 1 LGD 0.0589
55 H15 -1.1817 0.3341 -5.6163 H 1 LGD 0.0589
56 H16 -2.9578 -1.1512 -5.4596 H 1 LGD 0.4551
57 H17 -1.3363 3.3158 -4.4514 H 1 LGD 0.4663
58 H18 1.7176 3.5208 -1.2948 H 1 LGD 0.4680
59 H19 0.4917 4.1722 -2.1897 H 1 LGD 0.4680
60 H20 1.5503 0.7369 -0.0883 H 1 LGD 0.4119
61 H21 2.1517 -1.4819 -0.1122 H 1 LGD 0.3183
62 H22 4.8139 -3.3681 1.6152 H 1 LGD 0.1134
63 H23 3.9518 -0.4648 1.0792 H 1 LGD 0.0516
64 H24 4.1542 -1.1978 2.6722 H 1 LGD 0.0516
65 H25 6.5806 -1.6147 2.1883 H 1 LGD 0.1418
66 H26 6.3840 -0.8814 0.5829 H 1 LGD 0.1418
67 H27 5.8944 0.4722 3.1540 H 1 LGD 0.4642
68 H28 5.7162 1.1519 1.6629 H 1 LGD 0.4642
69 H29 -0.9384 1.4265 1.1459 H 1 LGD 0.0610
70 H30 -2.9854 3.4700 2.1747 H 1 LGD 0.0857
71 H31 -3.9902 3.4951 -0.0324 H 1 LGD 0.1043
72 H32 -4.8863 1.8489 1.4822 H 1 LGD 0.1281
73 H33 0.0283 2.9435 2.8561 H 1 LGD 0.1363
74 H34 -1.3870 2.6986 3.9006 H 1 LGD 0.1363
75 H35 0.4977 0.6016 3.0528 H 1 LGD 0.4599
76 H36 0.3949 1.2680 4.5606 H 1 LGD 0.4599
77 H37 -1.9875 4.8987 0.7951 H 1 LGD 0.4612
78 H38 -2.3322 3.0686 -1.4063 H 1 LGD 0.4301
79 H39 -4.4630 0.8860 -1.1479 H 1 LGD 0.4317
80 H40 4.5787 -3.5886 -0.6379 H 1 LGD 0.4644
81 H41 -3.0160 -3.8133 2.1255 H 1 LGD 0.4775
82 H42 -1.7322 -4.1664 1.1635 H 1 LGD 0.4775
83 H43 -2.0900 -3.9416 -1.9460 H 1 LGD 0.4822
84 H44 1.7942 3.4974 -2.9400 H 1 LGD 0.4680
85 H45 7.2087 0.6942 2.1873 H 1 LGD 0.4642
86 H46 -0.8512 0.3649 3.9665 H 1 LGD 0.4599
87 H47 -1.5095 -3.9383 2.7851 H 1 LGD 0.4775
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1