@COMMENT
LIGANDBOX_ID = D02553-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02553
NAME = Rifamide_(USAN)
MOLECULAR_FORMULA = C43H58N2O13
MOLECULAR_WEIGHT = 810.938
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 210.6200
HOMO = -7.8951
LUMO = -0.9724
mLOGD = 2.108
mLOGS = -2.433
mLOGPA = -6.123
@MOLECULE
D02553-01
116 119 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.2930 0.5520 3.1740 C.3 1 LGD 0.1586
2 C2 2.6890 -0.1560 3.3510 C.3 1 LGD -0.0848
3 O1 2.2290 3.4350 2.9050 O.3 1 LGD -0.6152
4 C3 2.1080 2.8350 4.1980 C.3 1 LGD 0.1494
5 C4 0.9950 1.7240 4.1850 C.3 1 LGD -0.0841
6 C5 3.1170 4.9240 5.1700 C.2 1 LGD -0.1622
7 C6 1.9360 3.9670 5.2700 C.3 1 LGD -0.0657
8 C7 7.0040 3.5220 4.0510 C.2 1 LGD 0.6770
9 C8 6.7320 4.9250 4.5330 C.2 1 LGD -0.1699
10 C9 5.5660 5.3630 5.0930 C.2 1 LGD -0.0561
11 C10 4.3930 4.5340 5.3660 C.2 1 LGD -0.1439
12 C11 1.8050 3.4220 6.7160 C.3 1 LGD -0.0829
13 C12 -0.4270 2.3090 3.9490 C.3 1 LGD -0.0852
14 O2 1.1680 1.0320 1.8340 O.3 1 LGD -0.6047
15 C13 7.8670 5.9260 4.3130 C.3 1 LGD -0.0649
16 O3 6.1610 2.6430 4.1240 O.2 1 LGD -0.5969
17 N1 8.2200 3.2180 3.4400 N.am 1 LGD -0.4758
18 C14 2.8790 -1.3090 2.2960 C.3 1 LGD 0.1600
19 O4 1.8420 -2.2910 2.5470 O.3 1 LGD -0.4516
20 C15 4.2710 -2.0420 2.3170 C.3 1 LGD -0.0570
21 C16 8.5840 1.9190 3.0890 C.ar 1 LGD 0.0554
22 C17 8.3420 0.8610 3.9710 C.ar 1 LGD -0.1563
23 C18 9.1520 1.6630 1.8280 C.ar 1 LGD 0.0975
24 C19 9.3920 0.3200 1.4010 C.ar 1 LGD -0.0946
25 C20 9.1360 -0.7490 2.3180 C.ar 1 LGD 0.0728
26 C21 8.6020 -0.4680 3.6020 C.ar 1 LGD 0.1380
27 C22 9.8270 0.0130 0.0660 C.ar 1 LGD 0.1894
28 C23 9.9280 -1.3250 -0.3760 C.ar 1 LGD -0.1948
29 C24 9.6660 -2.3410 0.5440 C.ar 1 LGD 0.1857
30 C25 9.3560 -2.0730 1.8650 C.ar 1 LGD -0.2638
31 O5 9.3850 2.7350 1.0070 O.3 1 LGD -0.5141
32 O6 10.0990 0.9990 -0.8480 O.3 1 LGD -0.5218
33 C26 2.8960 -0.6640 4.8100 C.3 1 LGD -0.0860
34 C27 1.0430 -2.7520 1.5360 C.2 1 LGD 0.6379
35 C28 0.0240 -3.7590 2.0580 C.3 1 LGD -0.1502
36 O7 1.1250 -2.4180 0.3660 O.2 1 LGD -0.5191
37 C29 4.3930 -3.0740 1.1470 C.3 1 LGD 0.2070
38 O8 4.5780 -2.3530 -0.0910 O.3 1 LGD -0.4282
39 C30 5.5320 -4.0680 1.3470 C.2 1 LGD -0.2542
40 C31 5.4580 -1.0350 2.3140 C.3 1 LGD -0.0856
41 C32 4.3270 -3.1140 -1.2870 C.3 1 LGD 0.1239
42 C33 6.8000 -3.8790 0.9690 C.2 1 LGD 0.0436
43 O9 7.7710 -4.8180 1.1970 O.3 1 LGD -0.3449
44 O10 9.6300 -3.6850 0.2400 O.3 1 LGD -0.3227
45 C34 9.1510 -4.4210 1.3940 C.3 1 LGD 0.2578
46 C35 9.2640 -3.4010 2.5360 C.2 1 LGD 0.5562
47 C36 10.0120 -5.6870 1.5860 C.3 1 LGD -0.0638
48 C37 10.2950 -1.6580 -1.8240 C.3 1 LGD -0.0466
49 O11 8.2200 -1.5010 4.4380 O.3 1 LGD -0.3127
50 O12 9.5870 -3.6700 3.6810 O.2 1 LGD -0.4495
51 C38 7.4390 -1.3350 5.6440 C.3 1 LGD 0.0875
52 C39 8.2520 -0.6730 6.7780 C.2 1 LGD 0.6366
53 N2 7.5160 -0.0350 7.7870 N.am 1 LGD -0.5185
54 O13 9.4700 -0.6110 6.7320 O.2 1 LGD -0.5559
55 C40 8.2030 0.8030 8.7970 C.3 1 LGD 0.1072
56 C41 8.3970 2.2560 8.3120 C.3 1 LGD -0.1153
57 C42 6.0730 -0.2840 8.0380 C.3 1 LGD 0.1072
58 C43 5.1630 0.8240 7.4640 C.3 1 LGD -0.1153
59 H1 0.5230 -0.2120 3.3370 H 1 LGD 0.0657
60 H2 3.4580 0.5990 3.1500 H 1 LGD 0.0693
61 H3 2.9380 4.1010 2.9640 H 1 LGD 0.4187
62 H4 3.0540 2.3340 4.4340 H 1 LGD 0.0441
63 H5 0.9630 1.2720 5.1830 H 1 LGD 0.0534
64 H6 2.8880 5.9300 4.8230 H 1 LGD 0.1246
65 H7 1.0230 4.5320 5.0420 H 1 LGD 0.0651
66 H8 5.4490 6.4180 5.3370 H 1 LGD 0.1338
67 H9 4.5840 3.5140 5.6890 H 1 LGD 0.1488
68 H10 2.6270 2.7370 6.9580 H 1 LGD 0.0375
69 H11 1.8240 4.2460 7.4400 H 1 LGD 0.0375
70 H12 0.8580 2.8860 6.8530 H 1 LGD 0.0375
71 H13 -0.4730 2.8920 3.0200 H 1 LGD 0.0398
72 H14 -1.1690 1.5040 3.8800 H 1 LGD 0.0398
73 H15 -0.7290 2.9620 4.7760 H 1 LGD 0.0398
74 H16 1.4990 1.9520 1.8440 H 1 LGD 0.4305
75 H17 8.7900 5.5900 4.8030 H 1 LGD 0.0476
76 H18 8.0790 6.0550 3.2440 H 1 LGD 0.0476
77 H19 7.6260 6.9160 4.7200 H 1 LGD 0.0476
78 H20 8.7490 3.9800 3.0400 H 1 LGD 0.3335
79 H21 2.7570 -0.8660 1.2990 H 1 LGD 0.0980
80 H22 4.3320 -2.6180 3.2490 H 1 LGD 0.0552
81 H23 7.9260 1.0920 4.9440 H 1 LGD 0.1582
82 H24 9.7130 2.3820 0.1560 H 1 LGD 0.4545
83 H25 10.3420 0.5820 -1.6930 H 1 LGD 0.4565
84 H26 2.1080 -1.3710 5.0970 H 1 LGD 0.0320
85 H27 3.8640 -1.1640 4.9320 H 1 LGD 0.0320
86 H28 2.8850 0.1650 5.5250 H 1 LGD 0.0320
87 H29 -0.6360 -4.0910 1.2460 H 1 LGD 0.0658
88 H30 0.5410 -4.6300 2.4780 H 1 LGD 0.0658
89 H31 -0.5840 -3.2990 2.8470 H 1 LGD 0.0658
90 H32 3.4620 -3.6520 1.0960 H 1 LGD 0.0431
91 H33 5.2520 -4.9890 1.8530 H 1 LGD 0.1314
92 H34 5.4890 -0.4460 3.2380 H 1 LGD 0.0426
93 H35 6.4150 -1.5590 2.2430 H 1 LGD 0.0426
94 H36 5.3890 -0.3380 1.4690 H 1 LGD 0.0426
95 H37 3.2910 -3.4770 -1.2970 H 1 LGD 0.0332
96 H38 4.4820 -2.4810 -2.1690 H 1 LGD 0.0332
97 H39 5.0070 -3.9730 -1.3500 H 1 LGD 0.0332
98 H40 7.1310 -2.9790 0.4580 H 1 LGD 0.1393
99 H41 11.0690 -5.4230 1.7120 H 1 LGD 0.0660
100 H42 9.6900 -6.2440 2.4750 H 1 LGD 0.0660
101 H43 9.9240 -6.3500 0.7160 H 1 LGD 0.0660
102 H44 11.2580 -1.2100 -2.0990 H 1 LGD 0.0505
103 H45 10.3800 -2.7380 -1.9940 H 1 LGD 0.0505
104 H46 9.5340 -1.2770 -2.5170 H 1 LGD 0.0505
105 H47 6.5470 -0.7370 5.4280 H 1 LGD 0.0778
106 H48 7.1120 -2.3170 6.0050 H 1 LGD 0.0778
107 H49 7.6230 0.8130 9.7280 H 1 LGD 0.0473
108 H50 9.1820 0.3640 9.0300 H 1 LGD 0.0473
109 H51 8.9270 2.8440 9.0720 H 1 LGD 0.0421
110 H52 8.9890 2.2800 7.3880 H 1 LGD 0.0421
111 H53 7.4360 2.7430 8.1150 H 1 LGD 0.0421
112 H54 5.7800 -1.2520 7.6130 H 1 LGD 0.0473
113 H55 5.9020 -0.3560 9.1200 H 1 LGD 0.0473
114 H56 4.1090 0.5660 7.6190 H 1 LGD 0.0421
115 H57 5.3470 1.7830 7.9630 H 1 LGD 0.0421
116 H58 5.3290 0.9580 6.3880 H 1 LGD 0.0421
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 1 5 1
5 6 7 1
6 4 7 1
7 8 9 1
8 9 10 2
9 10 11 1
10 6 11 2
11 7 12 1
12 5 13 1
13 1 14 1
14 9 15 1
15 8 16 2
16 8 17 am
17 2 18 1
18 18 19 1
19 18 20 1
20 17 21 1
21 21 22 ar
22 21 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 24 27 1
27 27 28 2
28 28 29 1
29 29 30 2
30 25 30 1
31 23 31 1
32 27 32 1
33 2 33 1
34 19 34 1
35 34 35 1
36 34 36 2
37 22 26 ar
38 20 37 1
39 37 38 1
40 37 39 1
41 20 40 1
42 38 41 1
43 39 42 2
44 42 43 1
45 29 44 1
46 44 45 1
47 43 45 1
48 30 46 1
49 45 46 1
50 45 47 1
51 28 48 1
52 26 49 1
53 46 50 2
54 49 51 1
55 51 52 1
56 52 53 am
57 52 54 2
58 53 55 1
59 55 56 1
60 53 57 1
61 57 58 1
62 1 59 1
63 2 60 1
64 3 61 1
65 4 62 1
66 5 63 1
67 6 64 1
68 7 65 1
69 10 66 1
70 11 67 1
71 12 68 1
72 12 69 1
73 12 70 1
74 13 71 1
75 13 72 1
76 13 73 1
77 14 74 1
78 15 75 1
79 15 76 1
80 15 77 1
81 17 78 1
82 18 79 1
83 20 80 1
84 22 81 1
85 31 82 1
86 32 83 1
87 33 84 1
88 33 85 1
89 33 86 1
90 35 87 1
91 35 88 1
92 35 89 1
93 37 90 1
94 39 91 1
95 40 92 1
96 40 93 1
97 40 94 1
98 41 95 1
99 41 96 1
100 41 97 1
101 42 98 1
102 47 99 1
103 47 100 1
104 47 101 1
105 48 102 1
106 48 103 1
107 48 104 1
108 51 105 1
109 51 106 1
110 55 107 1
111 55 108 1
112 56 109 1
113 56 110 1
114 56 111 1
115 57 112 1
116 57 113 1
117 58 114 1
118 58 115 1
119 58 116 1