@COMMENT
LIGANDBOX_ID = D02553-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02553
NAME = Rifamide_(USAN)
MOLECULAR_FORMULA = C43H58N2O13
MOLECULAR_WEIGHT = 810.938
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 210.6200
HOMO = -7.8951
LUMO = -0.9724
mLOGD = 2.108
mLOGS = -2.433
mLOGPA = -6.123
@MOLECULE
D02553-02
116 119 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -4.1373 0.3968 -1.6775 C.3 1 LGD 0.1589
2 C2 -2.5778 0.1811 -1.7233 C.3 1 LGD -0.0850
3 O1 -4.5903 0.3876 1.3324 O.3 1 LGD -0.6145
4 C3 -4.4339 -0.8435 0.6220 C.3 1 LGD 0.1484
5 C4 -4.9343 -0.6916 -0.8613 C.3 1 LGD -0.0840
6 C5 -4.4631 -2.0026 2.8532 C.2 1 LGD -0.1629
7 C6 -5.0834 -1.9960 1.4607 C.3 1 LGD -0.0663
8 C7 -0.3130 -0.9124 3.5148 C.2 1 LGD 0.6777
9 C8 -1.2415 -1.4520 4.5751 C.2 1 LGD -0.1682
10 C9 -2.4841 -1.9790 4.3647 C.2 1 LGD -0.0567
11 C10 -3.1385 -2.1478 3.0662 C.2 1 LGD -0.1447
12 C11 -4.9298 -3.3875 0.7956 C.3 1 LGD -0.0829
13 C12 -6.4661 -0.4377 -0.9495 C.3 1 LGD -0.0852
14 O2 -4.4365 1.6952 -1.1639 O.3 1 LGD -0.6039
15 C13 -0.7280 -1.3362 6.0119 C.3 1 LGD -0.0658
16 O3 -0.6130 -0.9208 2.3326 O.2 1 LGD -0.5956
17 N1 0.8943 -0.3235 3.8877 N.am 1 LGD -0.4755
18 C14 -1.8419 1.3736 -2.4368 C.3 1 LGD 0.1611
19 O4 -2.2847 1.3816 -3.8158 O.3 1 LGD -0.4510
20 C15 -0.2687 1.3280 -2.4311 C.3 1 LGD -0.0595
21 C16 1.8534 0.0952 2.9669 C.ar 1 LGD 0.0553
22 C17 2.1757 -0.7121 1.8719 C.ar 1 LGD -0.1539
23 C18 2.4742 1.3478 3.1195 C.ar 1 LGD 0.0994
24 C19 3.3475 1.8529 2.1072 C.ar 1 LGD -0.0950
25 C20 3.6536 1.0169 0.9848 C.ar 1 LGD 0.0737
26 C21 3.0685 -0.2732 0.8816 C.ar 1 LGD 0.1340
27 C22 3.8694 3.1919 2.1506 C.ar 1 LGD 0.1900
28 C23 4.5970 3.7259 1.0647 C.ar 1 LGD -0.1973
29 C24 4.8563 2.8906 -0.0216 C.ar 1 LGD 0.1848
30 C25 4.4729 1.5615 -0.0360 C.ar 1 LGD -0.2645
31 O5 2.1405 2.0890 4.2210 O.3 1 LGD -0.5128
32 O6 3.6213 4.0303 3.2044 O.3 1 LGD -0.5197
33 C26 -2.2264 -1.1932 -2.3693 C.3 1 LGD -0.0852
34 C27 -2.7360 2.5238 -4.4162 C.2 1 LGD 0.6397
35 C28 -3.1081 2.2630 -5.8722 C.3 1 LGD -0.1499
36 O7 -2.8332 3.6127 -3.8755 O.2 1 LGD -0.5218
37 C29 0.3322 2.7122 -2.8491 C.3 1 LGD 0.2080
38 O8 0.2583 3.6006 -1.7098 O.3 1 LGD -0.4321
39 C30 1.7706 2.5946 -3.3429 C.2 1 LGD -0.2618
40 C31 0.3250 0.8473 -1.0711 C.3 1 LGD -0.0815
41 C32 0.5054 4.9920 -1.9746 C.3 1 LGD 0.1248
42 C33 2.8579 2.6800 -2.5719 C.2 1 LGD 0.0429
43 O9 4.1265 2.5443 -3.0750 O.3 1 LGD -0.3432
44 O10 5.3997 3.3099 -1.2164 O.3 1 LGD -0.3220
45 C34 5.2488 2.2547 -2.1994 C.3 1 LGD 0.2575
46 C35 4.9598 1.0205 -1.3370 C.2 1 LGD 0.5547
47 C36 6.5334 2.1562 -3.0509 C.3 1 LGD -0.0625
48 C37 5.0470 5.1892 1.0468 C.3 1 LGD -0.0462
49 O11 3.2933 -1.0559 -0.2370 O.3 1 LGD -0.3115
50 O12 5.3860 -0.1010 -1.5567 O.2 1 LGD -0.4482
51 C38 2.5121 -2.2170 -0.5921 C.3 1 LGD 0.0854
52 C39 2.8349 -3.4279 0.3066 C.2 1 LGD 0.6371
53 N2 1.8329 -4.4007 0.4259 N.am 1 LGD -0.5182
54 O13 3.8588 -3.4691 0.9694 O.2 1 LGD -0.5566
55 C40 1.9543 -5.4811 1.4315 C.3 1 LGD 0.1073
56 C41 1.4108 -5.0552 2.8122 C.3 1 LGD -0.1154
57 C42 0.7046 -4.5391 -0.5302 C.3 1 LGD 0.1073
58 C43 -0.6112 -3.9227 -0.0045 C.3 1 LGD -0.1154
59 H1 -4.4976 0.3505 -2.7134 H 1 LGD 0.0655
60 H2 -2.2197 0.1680 -0.6888 H 1 LGD 0.0675
61 H3 -4.2845 0.2268 2.2429 H 1 LGD 0.4188
62 H4 -3.3656 -1.0788 0.5731 H 1 LGD 0.0418
63 H5 -4.7634 -1.6473 -1.3689 H 1 LGD 0.0537
64 H6 -5.1396 -1.7794 3.6765 H 1 LGD 0.1246
65 H7 -6.1567 -1.7934 1.5677 H 1 LGD 0.0653
66 H8 -3.0919 -2.2726 5.2189 H 1 LGD 0.1323
67 H9 -2.4944 -2.3534 2.2163 H 1 LGD 0.1504
68 H10 -3.8816 -3.5933 0.5442 H 1 LGD 0.0379
69 H11 -5.2794 -4.1772 1.4725 H 1 LGD 0.0379
70 H12 -5.5239 -3.4552 -0.1238 H 1 LGD 0.0379
71 H13 -6.7630 0.4474 -0.3729 H 1 LGD 0.0398
72 H14 -6.7720 -0.2807 -1.9917 H 1 LGD 0.0398
73 H15 -7.0315 -1.2970 -0.5691 H 1 LGD 0.0398
74 H16 -4.5521 1.5848 -0.2009 H 1 LGD 0.4308
75 H17 0.2408 -1.8384 6.1283 H 1 LGD 0.0477
76 H18 -0.6020 -0.2853 6.3022 H 1 LGD 0.0477
77 H19 -1.4172 -1.7930 6.7332 H 1 LGD 0.0477
78 H20 0.9780 0.0057 4.8377 H 1 LGD 0.3330
79 H21 -2.1426 2.2977 -1.9274 H 1 LGD 0.0970
80 H22 0.0416 0.6006 -3.1925 H 1 LGD 0.0575
81 H23 1.7061 -1.6853 1.8005 H 1 LGD 0.1593
82 H24 2.6008 2.9463 4.1433 H 1 LGD 0.4540
83 H25 4.0328 4.8902 3.0076 H 1 LGD 0.4563
84 H26 -2.7138 -1.3041 -3.3463 H 1 LGD 0.0322
85 H27 -1.1478 -1.3153 -2.5179 H 1 LGD 0.0322
86 H28 -2.5537 -2.0219 -1.7307 H 1 LGD 0.0322
87 H29 -3.4833 3.1802 -6.3430 H 1 LGD 0.0659
88 H30 -2.2274 1.9120 -6.4245 H 1 LGD 0.0659
89 H31 -3.8839 1.4891 -5.9267 H 1 LGD 0.0659
90 H32 -0.2643 3.1257 -3.6699 H 1 LGD 0.0488
91 H33 1.8754 2.4129 -4.4106 H 1 LGD 0.1324
92 H34 0.0663 -0.1970 -0.8655 H 1 LGD 0.0413
93 H35 1.4182 0.9059 -1.0788 H 1 LGD 0.0413
94 H36 -0.0432 1.4539 -0.2340 H 1 LGD 0.0413
95 H37 -0.2279 5.3793 -2.6926 H 1 LGD 0.0324
96 H38 0.4196 5.5648 -1.0428 H 1 LGD 0.0324
97 H39 1.5152 5.1377 -2.3775 H 1 LGD 0.0324
98 H40 2.7906 2.8642 -1.5049 H 1 LGD 0.1391
99 H41 7.4088 1.9749 -2.4146 H 1 LGD 0.0664
100 H42 6.4588 1.3326 -3.7722 H 1 LGD 0.0664
101 H43 6.7003 3.0861 -3.6090 H 1 LGD 0.0664
102 H44 5.6450 5.4302 1.9346 H 1 LGD 0.0505
103 H45 5.6641 5.4229 0.1705 H 1 LGD 0.0505
104 H46 4.1815 5.8635 1.0266 H 1 LGD 0.0505
105 H47 1.4460 -1.9770 -0.5286 H 1 LGD 0.0781
106 H48 2.7343 -2.5049 -1.6267 H 1 LGD 0.0781
107 H49 1.4028 -6.3665 1.0908 H 1 LGD 0.0470
108 H50 3.0077 -5.7729 1.5288 H 1 LGD 0.0470
109 H51 1.5322 -5.8696 3.5370 H 1 LGD 0.0423
110 H52 1.9539 -4.1794 3.1891 H 1 LGD 0.0423
111 H53 0.3456 -4.8018 2.7612 H 1 LGD 0.0423
112 H54 0.9678 -4.0713 -1.4865 H 1 LGD 0.0470
113 H55 0.5374 -5.6033 -0.7395 H 1 LGD 0.0470
114 H56 -1.3962 -4.0018 -0.7661 H 1 LGD 0.0423
115 H57 -0.9623 -4.4476 0.8914 H 1 LGD 0.0423
116 H58 -0.4840 -2.8625 0.2446 H 1 LGD 0.0423
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 1 5 1
5 6 7 1
6 4 7 1
7 8 9 1
8 9 10 2
9 10 11 1
10 6 11 2
11 7 12 1
12 5 13 1
13 1 14 1
14 9 15 1
15 8 16 2
16 8 17 am
17 2 18 1
18 18 19 1
19 18 20 1
20 17 21 1
21 21 22 ar
22 21 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 24 27 ar
27 27 28 ar
28 28 29 ar
29 29 30 ar
30 25 30 ar
31 23 31 1
32 27 32 1
33 2 33 1
34 19 34 1
35 34 35 1
36 34 36 2
37 22 26 ar
38 20 37 1
39 37 38 1
40 37 39 1
41 20 40 1
42 38 41 1
43 39 42 2
44 42 43 1
45 29 44 1
46 44 45 1
47 43 45 1
48 30 46 1
49 45 46 1
50 45 47 1
51 28 48 1
52 26 49 1
53 46 50 2
54 49 51 1
55 51 52 1
56 52 53 am
57 52 54 2
58 53 55 1
59 55 56 1
60 53 57 1
61 57 58 1
62 1 59 1
63 2 60 1
64 3 61 1
65 4 62 1
66 5 63 1
67 6 64 1
68 7 65 1
69 10 66 1
70 11 67 1
71 12 68 1
72 12 69 1
73 12 70 1
74 13 71 1
75 13 72 1
76 13 73 1
77 14 74 1
78 15 75 1
79 15 76 1
80 15 77 1
81 17 78 1
82 18 79 1
83 20 80 1
84 22 81 1
85 31 82 1
86 32 83 1
87 33 84 1
88 33 85 1
89 33 86 1
90 35 87 1
91 35 88 1
92 35 89 1
93 37 90 1
94 39 91 1
95 40 92 1
96 40 93 1
97 40 94 1
98 41 95 1
99 41 96 1
100 41 97 1
101 42 98 1
102 47 99 1
103 47 100 1
104 47 101 1
105 48 102 1
106 48 103 1
107 48 104 1
108 51 105 1
109 51 106 1
110 55 107 1
111 55 108 1
112 56 109 1
113 56 110 1
114 56 111 1
115 57 112 1
116 57 113 1
117 58 114 1
118 58 115 1
119 58 116 1