@COMMENT
LIGANDBOX_ID = D02553-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02553
NAME = Rifamide_(USAN)
MOLECULAR_FORMULA = C43H58N2O13
MOLECULAR_WEIGHT = 810.938
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 210.6200
HOMO = -7.8951
LUMO = -0.9724
mLOGD = 2.108
mLOGS = -2.433
mLOGPA = -6.123
@MOLECULE
D02553-03
116 119 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.5302 1.0890 -3.7199 C.3 1 LGD 0.1564
2 C2 0.5347 0.9947 -2.5087 C.3 1 LGD -0.0805
3 O1 4.0215 -0.3949 -2.7078 O.3 1 LGD -0.6176
4 C3 3.7641 0.9504 -2.2998 C.3 1 LGD 0.1566
5 C4 2.9436 1.7116 -3.4151 C.3 1 LGD -0.0858
6 C5 6.1053 0.7035 -1.2121 C.2 1 LGD -0.1479
7 C6 5.1202 1.6449 -1.9137 C.3 1 LGD -0.0741
8 C7 3.0419 -0.8219 2.3891 C.2 1 LGD 0.6800
9 C8 4.2107 -1.0089 1.4726 C.2 1 LGD -0.1754
10 C9 4.7637 0.0412 0.8072 C.2 1 LGD -0.0720
11 C10 5.9294 -0.0063 -0.0731 C.2 1 LGD -0.1464
12 C11 4.9128 2.9711 -1.1364 C.3 1 LGD -0.0839
13 C12 3.7346 1.8730 -4.7489 C.3 1 LGD -0.0874
14 O2 1.6909 -0.2017 -4.3096 O.3 1 LGD -0.6022
15 C13 4.7479 -2.4365 1.3060 C.3 1 LGD -0.0642
16 O3 2.8209 0.2760 2.8672 O.2 1 LGD -0.5647
17 N1 2.2169 -1.9050 2.6871 N.am 1 LGD -0.4736
18 C14 -0.8544 0.4157 -2.9806 C.3 1 LGD 0.1590
19 O4 -1.4020 1.3463 -3.9475 O.3 1 LGD -0.4518
20 C15 -1.9298 0.1844 -1.8588 C.3 1 LGD -0.0564
21 C16 0.8161 -1.8832 2.7370 C.ar 1 LGD 0.0801
22 C17 0.0653 -0.6974 2.7467 C.ar 1 LGD -0.1903
23 C18 0.1342 -3.1164 2.6613 C.ar 1 LGD 0.0719
24 C19 -1.2909 -3.1680 2.5472 C.ar 1 LGD -0.0833
25 C20 -2.0275 -1.9425 2.5896 C.ar 1 LGD 0.0599
26 C21 -1.3365 -0.7086 2.6884 C.ar 1 LGD 0.1495
27 C22 -1.9984 -4.4023 2.3344 C.ar 1 LGD 0.1845
28 C23 -3.3883 -4.4133 2.0799 C.ar 1 LGD -0.1924
29 C24 -4.0690 -3.1960 2.1114 C.ar 1 LGD 0.1802
30 C25 -3.4341 -2.0106 2.4293 C.ar 1 LGD -0.2589
31 O5 0.8939 -4.2557 2.6283 O.3 1 LGD -0.5205
32 O6 -1.3530 -5.6097 2.3064 O.3 1 LGD -0.5198
33 C26 0.3740 2.3634 -1.7831 C.3 1 LGD -0.0886
34 C27 -1.8526 0.9204 -5.1672 C.2 1 LGD 0.6370
35 C28 -2.3884 2.0867 -5.9911 C.3 1 LGD -0.1499
36 O7 -1.8388 -0.2345 -5.5588 O.2 1 LGD -0.5162
37 C29 -3.2203 -0.5003 -2.4263 C.3 1 LGD 0.2079
38 O8 -2.9152 -1.8763 -2.7407 O.3 1 LGD -0.4286
39 C30 -4.4072 -0.4296 -1.4691 C.2 1 LGD -0.2565
40 C31 -1.3399 -0.6130 -0.6636 C.3 1 LGD -0.0853
41 C32 -3.8754 -2.5397 -3.5817 C.3 1 LGD 0.1249
42 C33 -4.6661 -1.2955 -0.4833 C.2 1 LGD 0.0456
43 O9 -5.7505 -1.1527 0.3414 O.3 1 LGD -0.3446
44 O10 -5.3938 -3.0274 1.7699 O.3 1 LGD -0.3226
45 C34 -5.6944 -1.6090 1.7178 C.3 1 LGD 0.2575
46 C35 -4.5038 -0.9734 2.4454 C.2 1 LGD 0.5533
47 C36 -7.0620 -1.3487 2.3864 C.3 1 LGD -0.0630
48 C37 -4.1297 -5.7127 1.7538 C.3 1 LGD -0.0474
49 O11 -2.0267 0.4891 2.5922 O.3 1 LGD -0.3131
50 O12 -4.5715 0.0022 3.1741 O.2 1 LGD -0.4466
51 C38 -1.4048 1.7861 2.4451 C.3 1 LGD 0.0864
52 C39 -0.7216 2.2430 3.7537 C.2 1 LGD 0.6386
53 N2 0.3056 3.1917 3.6378 N.am 1 LGD -0.5111
54 O13 -1.0068 1.7299 4.8236 O.2 1 LGD -0.5529
55 C40 1.0612 3.6255 4.8378 C.3 1 LGD 0.1088
56 C41 2.2830 2.7277 5.1256 C.3 1 LGD -0.1114
57 C42 0.5882 3.9564 2.3961 C.3 1 LGD 0.1088
58 C43 1.7424 3.3510 1.5669 C.3 1 LGD -0.1114
59 H1 1.0585 1.7453 -4.4624 H 1 LGD 0.0661
60 H2 0.9714 0.2899 -1.7913 H 1 LGD 0.0590
61 H3 4.6765 -0.7543 -2.0829 H 1 LGD 0.4191
62 H4 3.1507 0.9205 -1.3909 H 1 LGD 0.0359
63 H5 2.7686 2.7326 -3.0583 H 1 LGD 0.0547
64 H6 7.0389 0.5724 -1.7569 H 1 LGD 0.1304
65 H7 5.6261 1.9250 -2.8439 H 1 LGD 0.0601
66 H8 4.3150 1.0239 0.9172 H 1 LGD 0.1430
67 H9 6.7236 -0.6821 0.2388 H 1 LGD 0.1336
68 H10 4.2526 2.8422 -0.2723 H 1 LGD 0.0398
69 H11 5.8729 3.3648 -0.7798 H 1 LGD 0.0398
70 H12 4.4634 3.7346 -1.7833 H 1 LGD 0.0398
71 H13 4.1588 0.9187 -5.0857 H 1 LGD 0.0409
72 H14 3.0808 2.2486 -5.5463 H 1 LGD 0.0409
73 H15 4.5523 2.5959 -4.6451 H 1 LGD 0.0409
74 H16 2.4963 -0.5833 -3.9112 H 1 LGD 0.4296
75 H17 5.4233 -2.6917 2.1326 H 1 LGD 0.0481
76 H18 3.9494 -3.1873 1.2840 H 1 LGD 0.0481
77 H19 5.3088 -2.5603 0.3720 H 1 LGD 0.0481
78 H20 2.6256 -2.8210 2.5762 H 1 LGD 0.3338
79 H21 -0.6606 -0.5563 -3.4514 H 1 LGD 0.0987
80 H22 -2.2393 1.1663 -1.4792 H 1 LGD 0.0570
81 H23 0.5634 0.2545 2.7671 H 1 LGD 0.1683
82 H24 0.2809 -5.0103 2.5394 H 1 LGD 0.4557
83 H25 -2.0158 -6.3007 2.1309 H 1 LGD 0.4561
84 H26 0.0273 3.1405 -2.4760 H 1 LGD 0.0336
85 H27 -0.3399 2.3025 -0.9539 H 1 LGD 0.0336
86 H28 1.3245 2.6932 -1.3501 H 1 LGD 0.0336
87 H29 -2.7387 1.7354 -6.9697 H 1 LGD 0.0663
88 H30 -3.2233 2.5640 -5.4629 H 1 LGD 0.0663
89 H31 -1.5981 2.8327 -6.1406 H 1 LGD 0.0663
90 H32 -3.5152 0.0223 -3.3437 H 1 LGD 0.0424
91 H33 -5.0707 0.4179 -1.6295 H 1 LGD 0.1322
92 H34 -0.5727 -0.0340 -0.1368 H 1 LGD 0.0403
93 H35 -2.1173 -0.8465 0.0674 H 1 LGD 0.0403
94 H36 -0.8889 -1.5568 -0.9951 H 1 LGD 0.0403
95 H37 -3.9721 -2.0121 -4.5391 H 1 LGD 0.0334
96 H38 -3.5470 -3.5671 -3.7810 H 1 LGD 0.0334
97 H39 -4.8575 -2.5768 -3.0940 H 1 LGD 0.0334
98 H40 -4.0385 -2.1590 -0.2815 H 1 LGD 0.1383
99 H41 -7.0613 -1.7063 3.4238 H 1 LGD 0.0663
100 H42 -7.2921 -0.2758 2.3952 H 1 LGD 0.0663
101 H43 -7.8632 -1.8666 1.8444 H 1 LGD 0.0663
102 H44 -4.0169 -6.4441 2.5639 H 1 LGD 0.0509
103 H45 -5.2055 -5.5529 1.6111 H 1 LGD 0.0509
104 H46 -3.7422 -6.1642 0.8319 H 1 LGD 0.0509
105 H47 -0.6792 1.7563 1.6245 H 1 LGD 0.0735
106 H48 -2.1680 2.5323 2.1934 H 1 LGD 0.0735
107 H49 1.4052 4.6589 4.7046 H 1 LGD 0.0440
108 H50 0.3949 3.6178 5.7096 H 1 LGD 0.0440
109 H51 2.7900 3.0560 6.0413 H 1 LGD 0.0426
110 H52 1.9742 1.6838 5.2629 H 1 LGD 0.0426
111 H53 3.0096 2.7674 4.3062 H 1 LGD 0.0426
112 H54 -0.3151 4.0124 1.7771 H 1 LGD 0.0440
113 H55 0.8498 4.9891 2.6589 H 1 LGD 0.0440
114 H56 1.8919 3.9312 0.6484 H 1 LGD 0.0426
115 H57 2.6844 3.3682 2.1265 H 1 LGD 0.0426
116 H58 1.5284 2.3128 1.2852 H 1 LGD 0.0426
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 1 5 1
5 6 7 1
6 4 7 1
7 8 9 1
8 9 10 2
9 10 11 1
10 6 11 2
11 7 12 1
12 5 13 1
13 1 14 1
14 9 15 1
15 8 16 2
16 8 17 am
17 2 18 1
18 18 19 1
19 18 20 1
20 17 21 1
21 21 22 ar
22 21 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 24 27 ar
27 27 28 ar
28 28 29 ar
29 29 30 ar
30 25 30 ar
31 23 31 1
32 27 32 1
33 2 33 1
34 19 34 1
35 34 35 1
36 34 36 2
37 22 26 ar
38 20 37 1
39 37 38 1
40 37 39 1
41 20 40 1
42 38 41 1
43 39 42 2
44 42 43 1
45 29 44 1
46 44 45 1
47 43 45 1
48 30 46 1
49 45 46 1
50 45 47 1
51 28 48 1
52 26 49 1
53 46 50 2
54 49 51 1
55 51 52 1
56 52 53 am
57 52 54 2
58 53 55 1
59 55 56 1
60 53 57 1
61 57 58 1
62 1 59 1
63 2 60 1
64 3 61 1
65 4 62 1
66 5 63 1
67 6 64 1
68 7 65 1
69 10 66 1
70 11 67 1
71 12 68 1
72 12 69 1
73 12 70 1
74 13 71 1
75 13 72 1
76 13 73 1
77 14 74 1
78 15 75 1
79 15 76 1
80 15 77 1
81 17 78 1
82 18 79 1
83 20 80 1
84 22 81 1
85 31 82 1
86 32 83 1
87 33 84 1
88 33 85 1
89 33 86 1
90 35 87 1
91 35 88 1
92 35 89 1
93 37 90 1
94 39 91 1
95 40 92 1
96 40 93 1
97 40 94 1
98 41 95 1
99 41 96 1
100 41 97 1
101 42 98 1
102 47 99 1
103 47 100 1
104 47 101 1
105 48 102 1
106 48 103 1
107 48 104 1
108 51 105 1
109 51 106 1
110 55 107 1
111 55 108 1
112 56 109 1
113 56 110 1
114 56 111 1
115 57 112 1
116 57 113 1
117 58 114 1
118 58 115 1
119 58 116 1