@COMMENT
LIGANDBOX_ID = D02554-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02554
NAME = Rifaximin_(JAN/USAN/INN)_Xifaxan_(TN)
MOLECULAR_FORMULA = C43H51N3O11
MOLECULAR_WEIGHT = 785.891
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 12
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 198.3800
HOMO = -7.8171
LUMO = -0.9365
mLOGD = 2.201
mLOGPA = -6.446
mLOGS = -3.106
@MOLECULE
D02554-02
108 113 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.4921 1.7928 -3.3806 C.3 1 LGD 0.1550
2 C2 0.6859 1.1539 -2.1881 C.3 1 LGD -0.0795
3 O1 4.1167 0.2545 -3.1606 O.3 1 LGD -0.6136
4 C3 3.8805 1.3879 -2.3240 C.3 1 LGD 0.1510
5 C4 2.8995 2.4029 -3.0222 C.3 1 LGD -0.0840
6 C5 6.1899 0.9508 -1.2329 C.2 1 LGD -0.1417
7 C6 5.2684 1.9896 -1.8899 C.3 1 LGD -0.0732
8 C7 2.8213 -0.5393 2.0567 C.2 1 LGD 0.6551
9 C8 4.1731 -0.7334 1.4404 C.2 1 LGD -0.1759
10 C9 4.6999 0.2282 0.6363 C.2 1 LGD -0.0645
11 C10 5.9354 0.1832 -0.1443 C.2 1 LGD -0.1489
12 C11 5.1557 3.2730 -1.0196 C.3 1 LGD -0.0830
13 C12 3.5286 3.0774 -4.2758 C.3 1 LGD -0.0866
14 O2 1.6414 0.8321 -4.4265 O.3 1 LGD -0.6042
15 C13 4.8775 -2.0732 1.6811 C.3 1 LGD -0.0625
16 O3 2.1578 0.4348 1.7431 O.2 1 LGD -0.5756
17 N1 2.2851 -1.4899 2.9244 N.am 1 LGD -0.4600
18 C14 -0.7003 0.5955 -2.6912 C.3 1 LGD 0.1604
19 O4 -1.4540 1.7164 -3.2164 O.3 1 LGD -0.4471
20 C15 -1.5892 -0.1416 -1.6245 C.3 1 LGD -0.0551
21 C16 0.9049 -1.6344 3.0554 C.ar 1 LGD 0.0118
22 C17 0.0351 -0.5884 3.3970 C.ar 1 LGD -0.0734
23 C18 0.3120 -2.8640 2.6941 C.ar 1 LGD 0.1160
24 C19 -1.1050 -2.9643 2.4774 C.ar 1 LGD -0.1287
25 C20 -1.9124 -1.7864 2.6133 C.ar 1 LGD 0.1389
26 C21 -1.3128 -0.6259 3.1530 C.ar 1 LGD 0.0725
27 C22 -1.7245 -4.1846 2.0458 C.ar 1 LGD 0.1905
28 C23 -3.0837 -4.2171 1.6645 C.ar 1 LGD -0.2028
29 C24 -3.8053 -3.0217 1.6969 C.ar 1 LGD 0.1990
30 C25 -3.2523 -1.8407 2.1612 C.ar 1 LGD -0.2632
31 O5 1.1488 -3.9180 2.4429 O.3 1 LGD -0.5151
32 O6 -1.0220 -5.3566 1.9583 O.3 1 LGD -0.5217
33 C26 0.5155 2.1498 -1.0015 C.3 1 LGD -0.0890
34 C27 -2.0283 1.6641 -4.4577 C.2 1 LGD 0.6363
35 C28 -2.7756 2.9559 -4.7713 C.3 1 LGD -0.1503
36 O7 -1.9649 0.7175 -5.2239 O.2 1 LGD -0.5195
37 C29 -2.8825 -0.7438 -2.2753 C.3 1 LGD 0.2050
38 O8 -2.5022 -1.8577 -3.1094 O.3 1 LGD -0.4204
39 C30 -3.8816 -1.2136 -1.2312 C.2 1 LGD -0.2856
40 C31 -0.7744 -1.2206 -0.8478 C.3 1 LGD -0.0816
41 C32 -3.5286 -2.3351 -3.9970 C.3 1 LGD 0.1262
42 C33 -5.0577 -0.6149 -0.9886 C.2 1 LGD 0.0455
43 O9 -5.9256 -0.9280 0.0355 O.3 1 LGD -0.3220
44 O10 -5.0621 -2.8638 1.1576 O.3 1 LGD -0.3182
45 C34 -5.4772 -1.4858 1.3018 C.3 1 LGD 0.2475
46 C35 -4.2352 -0.7649 1.8454 C.2 1 LGD 0.5534
47 C36 -6.6475 -1.4471 2.3068 C.3 1 LGD -0.0769
48 C37 -3.7316 -5.5036 1.1463 C.3 1 LGD -0.0466
49 N2 -1.9271 0.5523 3.4826 N.ar 1 LGD -0.2488
50 C38 -0.9022 1.2868 3.9302 C.ar 1 LGD -0.0160
51 N3 0.3133 0.6604 3.8643 N.ar 1 LGD 0.0761
52 O11 -4.0057 0.4221 1.6899 O.2 1 LGD -0.4394
53 C39 -1.0762 2.6061 4.4195 C.ar 1 LGD -0.0922
54 C40 0.0702 3.1717 4.9420 C.ar 1 LGD -0.0654
55 C41 1.2855 2.3858 5.0917 C.ar 1 LGD -0.1710
56 C42 1.3927 1.0660 4.6483 C.ar 1 LGD -0.0475
57 C43 0.0770 4.5836 5.4700 C.3 1 LGD -0.0516
58 H1 0.8841 2.6219 -3.7648 H 1 LGD 0.0668
59 H2 1.2721 0.3035 -1.8202 H 1 LGD 0.0589
60 H3 4.7629 -0.3068 -2.6964 H 1 LGD 0.4141
61 H4 3.3672 1.0415 -1.4235 H 1 LGD 0.0434
62 H5 2.7100 3.2172 -2.3133 H 1 LGD 0.0583
63 H6 7.1461 0.8311 -1.7395 H 1 LGD 0.1285
64 H7 5.7809 2.3001 -2.8092 H 1 LGD 0.0605
65 H8 4.1422 1.1484 0.5149 H 1 LGD 0.1465
66 H9 6.6897 -0.5319 0.1769 H 1 LGD 0.1288
67 H10 4.8074 4.1234 -1.6180 H 1 LGD 0.0404
68 H11 4.4577 3.1513 -0.1844 H 1 LGD 0.0404
69 H12 6.1354 3.5451 -0.6068 H 1 LGD 0.0404
70 H13 3.8988 2.3320 -4.9908 H 1 LGD 0.0392
71 H14 2.7886 3.7027 -4.7913 H 1 LGD 0.0392
72 H15 4.3659 3.7293 -3.9996 H 1 LGD 0.0392
73 H16 2.4919 0.3830 -4.2610 H 1 LGD 0.4266
74 H17 4.1659 -2.8968 1.8172 H 1 LGD 0.0464
75 H18 5.5099 -2.3595 0.8323 H 1 LGD 0.0464
76 H19 5.5142 -2.0274 2.5732 H 1 LGD 0.0464
77 H20 2.8382 -2.3223 3.0638 H 1 LGD 0.3249
78 H21 -0.4872 -0.1280 -3.4881 H 1 LGD 0.0935
79 H22 -1.9290 0.6022 -0.8927 H 1 LGD 0.0703
80 H23 0.5892 -4.6779 2.1936 H 1 LGD 0.4573
81 H24 -1.6319 -6.0508 1.6528 H 1 LGD 0.4566
82 H25 0.0114 3.0688 -1.3263 H 1 LGD 0.0395
83 H26 -0.0700 1.7113 -0.1852 H 1 LGD 0.0395
84 H27 1.4854 2.4256 -0.5710 H 1 LGD 0.0395
85 H28 -3.5842 3.1043 -4.0450 H 1 LGD 0.0651
86 H29 -2.0891 3.8094 -4.7094 H 1 LGD 0.0651
87 H30 -3.2043 2.9144 -5.7805 H 1 LGD 0.0651
88 H31 -3.3648 0.0260 -2.8892 H 1 LGD 0.0340
89 H32 -3.5680 -2.0901 -0.6792 H 1 LGD 0.1403
90 H33 -0.0262 -0.7578 -0.1927 H 1 LGD 0.0391
91 H34 -1.4168 -1.8322 -0.2069 H 1 LGD 0.0391
92 H35 -0.2526 -1.8940 -1.5393 H 1 LGD 0.0391
93 H36 -4.3896 -2.7075 -3.4281 H 1 LGD 0.0312
94 H37 -3.8618 -1.5290 -4.6630 H 1 LGD 0.0312
95 H38 -3.1364 -3.1550 -4.6112 H 1 LGD 0.0312
96 H39 -5.3894 0.2444 -1.5665 H 1 LGD 0.1629
97 H40 -6.9539 -0.4117 2.5022 H 1 LGD 0.0630
98 H41 -7.5142 -1.9947 1.9158 H 1 LGD 0.0630
99 H42 -6.3557 -1.9012 3.2624 H 1 LGD 0.0630
100 H43 -3.6276 -6.3176 1.8748 H 1 LGD 0.0508
101 H44 -4.8043 -5.3803 0.9539 H 1 LGD 0.0508
102 H45 -3.2645 -5.8265 0.2073 H 1 LGD 0.0508
103 H46 -2.0326 3.1163 4.3881 H 1 LGD 0.1752
104 H47 2.1328 2.8339 5.5991 H 1 LGD 0.1442
105 H48 2.2451 0.4119 4.7692 H 1 LGD 0.1860
106 H49 -0.7147 5.1864 5.0075 H 1 LGD 0.0468
107 H50 -0.0783 4.5969 6.5557 H 1 LGD 0.0468
108 H51 1.0331 5.0795 5.2591 H 1 LGD 0.0468
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 1 5 1
5 6 7 1
6 4 7 1
7 8 9 1
8 9 10 2
9 10 11 1
10 6 11 2
11 7 12 1
12 5 13 1
13 1 14 1
14 9 15 1
15 8 16 2
16 8 17 am
17 2 18 1
18 18 19 1
19 18 20 1
20 17 21 1
21 21 22 ar
22 21 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 24 27 ar
27 27 28 ar
28 28 29 ar
29 29 30 ar
30 25 30 ar
31 23 31 1
32 27 32 1
33 2 33 1
34 19 34 1
35 34 35 1
36 34 36 2
37 22 26 ar
38 20 37 1
39 37 38 1
40 37 39 1
41 20 40 1
42 38 41 1
43 39 42 2
44 42 43 1
45 29 44 1
46 44 45 1
47 43 45 1
48 30 46 1
49 45 46 1
50 45 47 1
51 28 48 1
52 26 49 1
53 50 51 1
54 22 51 1
55 46 52 2
56 49 50 2
57 50 53 1
58 53 54 2
59 54 55 1
60 55 56 2
61 51 56 1
62 54 57 1
63 1 58 1
64 2 59 1
65 3 60 1
66 4 61 1
67 5 62 1
68 6 63 1
69 7 64 1
70 10 65 1
71 11 66 1
72 12 67 1
73 12 68 1
74 12 69 1
75 13 70 1
76 13 71 1
77 13 72 1
78 14 73 1
79 15 74 1
80 15 75 1
81 15 76 1
82 17 77 1
83 18 78 1
84 20 79 1
85 31 80 1
86 32 81 1
87 33 82 1
88 33 83 1
89 33 84 1
90 35 85 1
91 35 86 1
92 35 87 1
93 37 88 1
94 39 89 1
95 40 90 1
96 40 91 1
97 40 92 1
98 41 93 1
99 41 94 1
100 41 95 1
101 42 96 1
102 47 97 1
103 47 98 1
104 47 99 1
105 48 100 1
106 48 101 1
107 48 102 1
108 53 103 1
109 55 104 1
110 56 105 1
111 57 106 1
112 57 107 1
113 57 108 1