@COMMENT
LIGANDBOX_ID = D03016-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03016
NAME = Avoparcin_(USAN/INN)
MOLECULAR_FORMULA = C83H92N9O31Cl
MOLECULAR_WEIGHT = 1747.134
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 25
NUM_OF_ACCEPTOR = 31
NUM_OF_CHIRAL_ATOMS = 27
TPSA = 631.2600
HOMO = -8.8723
LUMO = -6.3596
mLOGD = -2.455
mLOGPA = -9.273
mLOGS = -0.030
@MOLECULE
D03016-04
218 231 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -3.0008 -2.0766 -2.0999 C.3 1 LGD 0.1369
2 C2 -3.9540 -3.1768 -1.5539 C.3 1 LGD 0.0917
3 C3 -4.8189 -3.7601 -2.6982 C.3 1 LGD 0.0666
4 C4 -5.5290 -2.6382 -3.4895 C.3 1 LGD -0.1230
5 C5 -4.5376 -1.5412 -3.9404 C.3 1 LGD 0.3540
6 O1 -3.7995 -1.0838 -2.7827 O.3 1 LGD -0.4189
7 C6 -0.6539 5.3145 -0.2470 C.3 1 LGD 0.3635
8 C7 -1.5438 6.0546 0.7763 C.3 1 LGD -0.1425
9 C8 -2.1799 5.0537 1.7686 C.3 1 LGD 0.0820
10 C9 -2.9577 3.9496 0.9984 C.3 1 LGD 0.0930
11 C10 -2.0410 3.2764 -0.0591 C.3 1 LGD 0.1333
12 O2 -1.4656 4.3097 -0.8970 O.3 1 LGD -0.4525
13 C11 -0.9215 2.3915 0.5419 C.3 1 LGD -0.1335
14 O3 -4.0942 4.5173 0.3433 O.3 1 LGD -0.6073
15 N1 -3.0805 5.7750 2.6855 N.4 1 LGD -0.8118
16 C12 0.1606 -1.0641 -4.5205 C.ar 1 LGD 0.0880
17 C13 0.3516 0.2566 -4.0813 C.ar 1 LGD 0.1797
18 C14 0.4439 -2.1395 -3.6522 C.ar 1 LGD 0.1130
19 O4 -0.2816 -1.2740 -5.8098 O.3 1 LGD -0.3498
20 C15 0.7959 0.4977 -2.7601 C.ar 1 LGD -0.1975
21 O5 0.0849 1.3038 -4.9507 O.3 1 LGD -0.2344
22 C16 0.9180 -1.8769 -2.3483 C.ar 1 LGD -0.2152
23 O6 0.2744 -3.4416 -4.0876 O.3 1 LGD -0.2691
24 C17 -1.5055 -1.9813 -6.0946 C.3 1 LGD 0.3719
25 C18 1.1284 -0.5590 -1.8983 C.ar 1 LGD -0.0322
26 C19 0.3093 2.6032 -4.5679 C.ar 1 LGD 0.0843
27 C20 0.7047 -4.5285 -3.3646 C.ar 1 LGD 0.1405
28 C21 -2.7361 -1.1690 -5.5739 C.3 1 LGD 0.0918
29 O7 -1.6255 -2.1754 -7.5247 O.3 1 LGD -0.3972
30 C22 1.6859 -0.2524 -0.4895 C.3 1 LGD 0.1031
31 C23 -0.7715 3.4325 -4.2339 C.ar 1 LGD 0.0122
32 C24 1.6226 3.0270 -4.3159 C.ar 1 LGD -0.1307
33 C25 2.0750 -4.7164 -3.1226 C.ar 1 LGD -0.1455
34 C26 -0.2354 -5.4060 -2.8072 C.ar 1 LGD -0.1455
35 O8 -3.6276 -2.0995 -4.9133 O.3 1 LGD -0.4663
36 C27 -3.4942 -0.4227 -6.7179 C.3 1 LGD 0.1396
37 C28 -1.6563 -1.0073 -8.3954 C.3 1 LGD 0.0721
38 C29 2.6342 0.9617 -0.4729 C.2 1 LGD 0.6308
39 N2 2.4559 -1.3831 0.0538 N.am 1 LGD -0.5768
40 C30 -0.5418 4.6250 -3.5325 C.ar 1 LGD -0.0792
41 Cl1 -2.4178 2.9238 -4.5536 Cl 1 LGD -0.1030
42 C31 1.8439 4.1878 -3.5657 C.ar 1 LGD -0.0832
43 C32 2.5013 -5.7494 -2.2757 C.ar 1 LGD -0.1102
44 C33 0.1921 -6.4462 -1.9672 C.ar 1 LGD -0.1102
45 C34 -2.4740 0.1423 -7.7331 C.3 1 LGD 0.0820
46 O9 -4.2890 0.6377 -6.1903 O.3 1 LGD -0.6241
47 C35 -0.2177 -0.5708 -8.7790 C.3 1 LGD 0.1178
48 N3 2.5047 1.8929 0.5482 N.am 1 LGD -0.5991
49 O10 3.5154 1.1027 -1.3049 O.2 1 LGD -0.5429
50 C36 1.8874 -2.3977 0.8089 C.2 1 LGD 0.6581
51 C37 0.7548 4.9453 -3.0786 C.ar 1 LGD -0.1095
52 C38 1.5608 -6.6101 -1.6693 C.ar 1 LGD -0.1482
53 O11 -3.1311 0.9110 -8.7427 O.3 1 LGD -0.5991
54 O12 0.5041 -1.6697 -9.3269 O.3 1 LGD -0.5789
55 C39 3.5627 2.8730 0.8469 C.3 1 LGD 0.1165
56 C40 2.7687 -3.5493 1.3184 C.3 1 LGD 0.1299
57 O13 0.6916 -2.3704 1.0353 O.2 1 LGD -0.6408
58 C41 0.9729 6.0826 -2.0591 C.3 1 LGD 0.1972
59 C42 1.9958 -7.6980 -0.6779 C.3 1 LGD 0.1946
60 C43 3.4104 3.3858 2.2788 C.ar 1 LGD -0.1639
61 C44 3.5869 4.0644 -0.1363 C.2 1 LGD 0.6706
62 N4 2.3073 -4.8136 0.7251 N.am 1 LGD -0.5970
63 C45 2.2740 5.9444 -1.1897 C.3 1 LGD 0.0248
64 O14 -0.2015 6.3021 -1.2132 O.3 1 LGD -0.4002
65 C46 1.8341 -7.2886 0.8165 C.3 1 LGD 0.0610
66 O15 3.3385 -8.1144 -0.9171 O.3 1 LGD -0.5618
67 C47 2.2906 4.1535 2.6406 C.ar 1 LGD -0.0723
68 C48 4.4406 3.2007 3.2163 C.ar 1 LGD -0.0412
69 N5 2.3876 4.5876 -0.6028 N.am 1 LGD -0.6254
70 O16 4.6363 4.5765 -0.4858 O.2 1 LGD -0.5036
71 C49 2.6549 -6.0564 1.2373 C.2 1 LGD 0.6544
72 C50 2.3645 7.0218 -0.0902 C.2 1 LGD 0.6635
73 N6 0.4148 -7.0368 1.1180 N.am 1 LGD -0.6050
74 C51 2.2342 4.8516 3.8675 C.ar 1 LGD -0.1114
75 C52 4.3622 3.8069 4.4801 C.ar 1 LGD -0.1433
76 O17 3.5539 -6.1426 2.0563 O.2 1 LGD -0.5119
77 N7 1.8501 6.7170 1.1596 N.am 1 LGD -0.5739
78 O18 2.8993 8.0996 -0.2850 O.2 1 LGD -0.5354
79 C53 -0.1503 -7.3163 2.3545 C.2 1 LGD 0.6473
80 C54 1.1222 5.8285 4.1232 C.ar 1 LGD -0.0999
81 C55 3.2829 4.6475 4.7994 C.ar 1 LGD 0.2160
82 C56 2.0637 7.5191 2.3727 C.3 1 LGD -0.0036
83 C57 -1.6123 -6.9211 2.6146 C.3 1 LGD 0.1096
84 O19 0.5116 -7.8684 3.2155 O.2 1 LGD -0.4754
85 C58 1.0245 7.0700 3.4150 C.ar 1 LGD 0.0667
86 C59 0.1276 5.5265 5.0885 C.ar 1 LGD 0.1448
87 O20 3.2800 5.2897 6.0034 O.3 1 LGD -0.4690
88 C60 3.5085 7.4528 2.9234 C.2 1 LGD 0.9299
89 N8 -2.4787 -7.0858 1.4242 N.4 1 LGD -0.7427
90 C61 -0.0664 7.9262 3.6573 C.ar 1 LGD -0.2001
91 C62 -0.9546 6.3898 5.3087 C.ar 1 LGD -0.3834
92 O21 0.2032 4.3849 5.8256 O.3 1 LGD -0.5089
93 O22 4.3274 6.7691 2.3314 O.co2 1 LGD -0.7790
94 O23 3.7308 8.0887 3.9391 O.co2 1 LGD -0.7790
95 C63 -2.5747 -8.5026 1.0164 C.3 1 LGD 0.0797
96 C64 -1.0542 7.5838 4.5879 C.ar 1 LGD 0.1128
97 O24 -2.1143 8.4145 4.7924 O.3 1 LGD -0.5032
98 C65 4.2566 -3.3170 1.0426 C.ar 1 LGD -0.1826
99 C66 4.7820 -3.4294 -0.2600 C.ar 1 LGD -0.0729
100 C67 6.1459 -3.1973 -0.4960 C.ar 1 LGD -0.1836
101 C68 6.9947 -2.8516 0.5669 C.ar 1 LGD 0.1698
102 C69 6.4776 -2.7360 1.8670 C.ar 1 LGD -0.1836
103 C70 5.1133 -2.9674 2.1029 C.ar 1 LGD -0.0729
104 O25 8.3197 -2.6258 0.3345 O.3 1 LGD -0.4770
105 C71 -1.6991 -5.4798 3.0998 C.ar 1 LGD -0.2317
106 C72 -1.8622 -0.3502 3.7692 C.3 1 LGD 0.3539
107 C73 -2.2707 0.8637 4.6442 C.3 1 LGD 0.1406
108 C74 -1.2755 1.0324 5.8207 C.3 1 LGD 0.0831
109 C75 0.1811 1.1302 5.2903 C.3 1 LGD 0.0933
110 C76 0.5072 -0.0999 4.3952 C.3 1 LGD 0.1453
111 O26 -0.4846 -0.1841 3.3412 O.3 1 LGD -0.4359
112 C77 -1.6431 -4.3963 2.2015 C.ar 1 LGD -0.0639
113 C78 -1.7562 -3.0782 2.6706 C.ar 1 LGD -0.1518
114 C79 -1.8861 -2.8281 4.0500 C.ar 1 LGD 0.2031
115 C80 -1.9238 -3.9066 4.9470 C.ar 1 LGD -0.1518
116 C81 -1.8354 -5.2254 4.4751 C.ar 1 LGD -0.0639
117 O27 -1.9937 -1.5511 4.5609 O.3 1 LGD -0.3660
118 O28 1.0963 1.2011 6.3844 O.3 1 LGD -0.5892
119 C82 1.8936 0.0199 3.7235 C.3 1 LGD -0.0839
120 O29 -2.2843 2.0542 3.8542 O.3 1 LGD -0.6226
121 O30 -1.6278 2.1776 6.5989 O.3 1 LGD -0.6302
122 C83 -2.2292 -1.3445 -0.9806 C.3 1 LGD -0.0899
123 O31 -3.2121 -4.2309 -0.9384 O.3 1 LGD -0.6283
124 N9 -5.8303 -4.6757 -2.1389 N.4 1 LGD -0.8169
125 H1 -2.2786 -2.5212 -2.7966 H 1 LGD 0.0725
126 H2 -4.6184 -2.7146 -0.8119 H 1 LGD 0.1042
127 H3 -4.1717 -4.3162 -3.3797 H 1 LGD 0.1261
128 H4 -6.0321 -3.0616 -4.3681 H 1 LGD 0.0866
129 H5 -6.3067 -2.1763 -2.8677 H 1 LGD 0.0866
130 H6 -5.0975 -0.7075 -4.3765 H 1 LGD 0.1501
131 H7 0.1865 4.8501 0.2700 H 1 LGD 0.0583
132 H8 -0.9433 6.7895 1.3219 H 1 LGD 0.1012
133 H9 -2.3247 6.6151 0.2461 H 1 LGD 0.1012
134 H10 -1.3869 4.5856 2.3559 H 1 LGD 0.1200
135 H11 -3.2988 3.1883 1.7102 H 1 LGD 0.0974
136 H12 -2.6618 2.6267 -0.6898 H 1 LGD 0.1044
137 H13 -0.2230 2.0832 -0.2440 H 1 LGD 0.0555
138 H14 -0.3585 2.9121 1.3249 H 1 LGD 0.0555
139 H15 -1.3497 1.4846 0.9870 H 1 LGD 0.0555
140 H16 -3.8048 4.7821 -0.5489 H 1 LGD 0.4487
141 H17 -3.8290 6.1921 2.1493 H 1 LGD 0.4629
142 H18 -2.5696 6.4972 3.1762 H 1 LGD 0.4629
143 H19 0.9012 1.5105 -2.3885 H 1 LGD 0.1633
144 H20 1.1208 -2.7036 -1.6799 H 1 LGD 0.1379
145 H21 -1.4823 -2.9623 -5.6094 H 1 LGD 0.0916
146 H22 -2.3772 -0.4270 -4.8494 H 1 LGD 0.0845
147 H23 0.8458 -0.0228 0.1779 H 1 LGD 0.0811
148 H24 2.4626 2.3948 -4.5908 H 1 LGD 0.1714
149 H25 2.8029 -4.0371 -3.5576 H 1 LGD 0.1438
150 H26 -1.2933 -5.2646 -3.0063 H 1 LGD 0.1438
151 H27 -4.1397 -1.1400 -7.2417 H 1 LGD 0.0679
152 H28 -2.1670 -1.2999 -9.3221 H 1 LGD 0.1106
153 H29 3.4474 -1.4289 -0.1356 H 1 LGD 0.3568
154 H30 -1.3903 5.2406 -3.2479 H 1 LGD 0.1648
155 H31 2.8667 4.4450 -3.3086 H 1 LGD 0.1753
156 H32 3.5628 -5.8543 -2.0704 H 1 LGD 0.1392
157 H33 -0.5450 -7.1135 -1.5297 H 1 LGD 0.1392
158 H34 -1.7818 0.7919 -7.1806 H 1 LGD 0.0688
159 H35 -4.4459 1.2538 -6.9288 H 1 LGD 0.4489
160 H36 -0.2761 0.2362 -9.5200 H 1 LGD 0.0605
161 H37 0.3094 -0.1703 -7.9053 H 1 LGD 0.0605
162 H38 1.7500 1.7830 1.2094 H 1 LGD 0.3073
163 H39 -2.4543 1.4483 -9.1914 H 1 LGD 0.4337
164 H40 0.3986 -2.4128 -8.7063 H 1 LGD 0.4136
165 H41 4.5356 2.3723 0.7576 H 1 LGD 0.1052
166 H42 2.6148 -3.5975 2.4041 H 1 LGD 0.0929
167 H43 1.1064 6.9957 -2.6530 H 1 LGD 0.1302
168 H44 1.3420 -8.5640 -0.8429 H 1 LGD 0.0410
169 H45 1.6001 -4.7774 0.0056 H 1 LGD 0.2971
170 H46 3.1348 6.1151 -1.8484 H 1 LGD 0.1266
171 H47 2.1919 -8.1302 1.4238 H 1 LGD 0.1445
172 H48 3.3873 -8.4138 -1.8420 H 1 LGD 0.4329
173 H49 1.4770 4.2695 1.9364 H 1 LGD 0.0846
174 H50 5.3156 2.6106 2.9586 H 1 LGD 0.1413
175 H51 1.5427 4.0679 -0.4181 H 1 LGD 0.2828
176 H52 -0.1472 -6.5706 0.4228 H 1 LGD 0.2874
177 H53 5.1681 3.6671 5.1948 H 1 LGD 0.1625
178 H54 1.4060 5.8199 1.2680 H 1 LGD 0.2611
179 H55 1.8837 8.5726 2.1251 H 1 LGD 0.0854
180 H56 -1.9793 -7.5884 3.3968 H 1 LGD 0.1385
181 H57 2.5126 5.8880 6.0204 H 1 LGD 0.4422
182 H58 -3.4023 -6.7442 1.6540 H 1 LGD 0.4446
183 H59 -0.1503 8.8641 3.1150 H 1 LGD 0.1738
184 H60 -1.7131 6.1345 6.0438 H 1 LGD 0.1258
185 H61 -0.5814 4.3378 6.3994 H 1 LGD 0.4294
186 H62 -3.2303 -8.5904 0.1479 H 1 LGD 0.1092
187 H63 -1.5839 -8.8817 0.7583 H 1 LGD 0.1092
188 H64 -2.9841 -9.0939 1.8378 H 1 LGD 0.1092
189 H65 -2.5969 8.1090 5.5800 H 1 LGD 0.4271
190 H66 4.1324 -3.6847 -1.0913 H 1 LGD 0.1295
191 H67 6.5436 -3.2836 -1.5032 H 1 LGD 0.1549
192 H68 7.1283 -2.4674 2.6943 H 1 LGD 0.1549
193 H69 4.7222 -2.8737 3.1124 H 1 LGD 0.1295
194 H70 8.7492 -2.4047 1.1786 H 1 LGD 0.4399
195 H71 -2.5204 -0.4081 2.8947 H 1 LGD 0.0808
196 H72 -3.2736 0.6833 5.0517 H 1 LGD 0.0711
197 H73 -1.3473 0.1388 6.4544 H 1 LGD 0.0741
198 H74 0.2791 2.0315 4.6720 H 1 LGD 0.0649
199 H75 0.4863 -1.0137 5.0033 H 1 LGD 0.0657
200 H76 -1.5140 -4.5695 1.1380 H 1 LGD 0.1370
201 H77 -1.7327 -2.2632 1.9559 H 1 LGD 0.1721
202 H78 -2.0257 -3.7198 6.0123 H 1 LGD 0.1721
203 H79 -1.8699 -6.0508 5.1812 H 1 LGD 0.1370
204 H80 1.3735 2.1315 6.4660 H 1 LGD 0.4384
205 H81 1.9503 0.9242 3.1068 H 1 LGD 0.0547
206 H82 2.6918 0.0685 4.4746 H 1 LGD 0.0547
207 H83 2.0904 -0.8489 3.0860 H 1 LGD 0.0547
208 H84 -2.1216 2.7837 4.4790 H 1 LGD 0.4305
209 H85 -1.1823 2.0789 7.4596 H 1 LGD 0.4465
210 H86 -1.5037 -2.0168 -0.5086 H 1 LGD 0.0648
211 H87 -1.6811 -0.4870 -1.3898 H 1 LGD 0.0648
212 H88 -2.9125 -0.9730 -0.2066 H 1 LGD 0.0648
213 H89 -2.6565 -4.6307 -1.6301 H 1 LGD 0.4199
214 H90 -5.3684 -5.3984 -1.6052 H 1 LGD 0.4565
215 H91 -6.4539 -4.1641 -1.5307 H 1 LGD 0.4565
216 H92 -3.4780 5.1287 3.3517 H 1 LGD 0.4629
217 H93 -2.1169 -6.5298 0.6631 H 1 LGD 0.4446
218 H94 -6.3634 -5.0966 -2.8869 H 1 LGD 0.4565
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 7 8 1
8 8 9 1
9 9 10 1
10 10 11 1
11 11 12 1
12 7 12 1
13 11 13 1
14 10 14 1
15 9 15 1
16 16 17 ar
17 16 18 ar
18 16 19 1
19 17 20 ar
20 17 21 1
21 18 22 ar
22 18 23 1
23 19 24 1
24 20 25 ar
25 21 26 1
26 23 27 1
27 24 28 1
28 24 29 1
29 25 30 1
30 26 31 ar
31 26 32 ar
32 27 33 ar
33 27 34 ar
34 28 35 1
35 28 36 1
36 29 37 1
37 30 38 1
38 30 39 1
39 31 40 ar
40 31 41 1
41 32 42 ar
42 33 43 ar
43 34 44 ar
44 36 45 1
45 36 46 1
46 37 47 1
47 38 48 am
48 38 49 2
49 39 50 am
50 40 51 ar
51 43 52 ar
52 45 53 1
53 47 54 1
54 48 55 1
55 50 56 1
56 50 57 2
57 51 58 1
58 52 59 1
59 55 60 1
60 55 61 1
61 56 62 1
62 58 63 1
63 58 64 1
64 59 65 1
65 59 66 1
66 60 67 ar
67 60 68 ar
68 61 69 am
69 61 70 2
70 62 71 am
71 63 72 1
72 65 73 1
73 67 74 ar
74 68 75 ar
75 71 76 2
76 72 77 am
77 72 78 2
78 73 79 am
79 74 80 1
80 74 81 ar
81 77 82 1
82 79 83 1
83 79 84 2
84 80 85 ar
85 80 86 ar
86 81 87 1
87 82 88 1
88 83 89 1
89 85 90 ar
90 86 91 ar
91 86 92 1
92 88 93 1
93 88 94 2
94 89 95 1
95 90 96 ar
96 96 97 1
97 22 25 ar
98 37 45 1
99 42 51 ar
100 44 52 ar
101 63 69 1
102 65 71 1
103 75 81 ar
104 82 85 1
105 91 96 ar
106 7 64 1
107 56 98 1
108 98 99 ar
109 99 100 ar
110 100 101 ar
111 101 102 ar
112 102 103 ar
113 98 103 ar
114 101 104 1
115 106 107 1
116 107 108 1
117 108 109 1
118 109 110 1
119 110 111 1
120 106 111 1
121 105 112 ar
122 112 113 ar
123 113 114 ar
124 114 115 ar
125 115 116 ar
126 105 116 ar
127 114 117 1
128 106 117 1
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131 107 120 1
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133 83 105 1
134 5 35 1
135 1 122 1
136 2 123 1
137 3 124 1
138 1 125 1
139 2 126 1
140 3 127 1
141 4 128 1
142 4 129 1
143 5 130 1
144 7 131 1
145 8 132 1
146 8 133 1
147 9 134 1
148 10 135 1
149 11 136 1
150 13 137 1
151 13 138 1
152 13 139 1
153 14 140 1
154 15 141 1
155 15 142 1
156 20 143 1
157 22 144 1
158 24 145 1
159 28 146 1
160 30 147 1
161 32 148 1
162 33 149 1
163 34 150 1
164 36 151 1
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167 40 154 1
168 42 155 1
169 43 156 1
170 44 157 1
171 45 158 1
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175 48 162 1
176 53 163 1
177 54 164 1
178 55 165 1
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180 58 167 1
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184 65 171 1
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186 67 173 1
187 68 174 1
188 69 175 1
189 73 176 1
190 75 177 1
191 77 178 1
192 82 179 1
193 83 180 1
194 87 181 1
195 89 182 1
196 90 183 1
197 91 184 1
198 92 185 1
199 95 186 1
200 95 187 1
201 95 188 1
202 97 189 1
203 99 190 1
204 100 191 1
205 102 192 1
206 103 193 1
207 104 194 1
208 106 195 1
209 107 196 1
210 108 197 1
211 109 198 1
212 110 199 1
213 112 200 1
214 113 201 1
215 115 202 1
216 116 203 1
217 118 204 1
218 119 205 1
219 119 206 1
220 119 207 1
221 120 208 1
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223 122 210 1
224 122 211 1
225 122 212 1
226 123 213 1
227 124 214 1
228 124 215 1
229 15 216 1
230 89 217 1
231 124 218 1