@COMMENT
LIGANDBOX_ID = D03637-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03637
NAME = Cytarabine_hydrochloride_(USAN)
MOLECULAR_FORMULA = C9H13N3O5
MOLECULAR_WEIGHT = 243.219
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 128.6100
HOMO = -9.1059
LUMO = 0.2007
mLOGD = -0.038
mLOGPA = -6.177
mLOGS = -0.825
@MOLECULE
D03637-01
30 31 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 25.8140 -18.8750 0.2830 C.3 1 LGD 0.3129
2 N1 26.5460 -18.4730 1.5110 N.am 1 LGD -0.3794
3 O1 24.7510 -17.9350 0.0100 O.3 1 LGD -0.4179
4 C2 25.1090 -20.2680 0.3560 C.3 1 LGD 0.1025
5 C3 27.9330 -18.5760 1.5540 C.2 1 LGD 0.8732
6 C4 25.8350 -18.0130 2.6160 C.2 1 LGD 0.0951
7 C5 23.7390 -18.6280 -0.7370 C.3 1 LGD 0.1191
8 C6 23.6400 -19.9610 0.0220 C.3 1 LGD 0.0659
9 O2 25.2260 -20.9280 1.6210 O.3 1 LGD -0.5823
10 N2 28.5570 -18.1790 2.7360 N.2 1 LGD -0.7755
11 O3 28.5860 -18.9930 0.6120 O.2 1 LGD -0.6184
12 C7 26.4890 -17.6320 3.7690 C.2 1 LGD -0.4238
13 C8 22.4330 -17.7930 -0.7680 C.3 1 LGD 0.1434
14 O4 23.0280 -20.9930 -0.7520 O.3 1 LGD -0.5942
15 C9 27.9280 -17.7240 3.8100 C.2 1 LGD 0.7680
16 O5 21.9270 -17.5500 0.5470 O.3 1 LGD -0.6036
17 N3 28.6340 -17.3570 4.9270 N.pl3 1 LGD -0.9221
18 H1 26.5170 -18.8660 -0.5580 H 1 LGD 0.1085
19 H2 25.5330 -20.9020 -0.4340 H 1 LGD 0.0703
20 H3 24.7610 -17.9950 2.4830 H 1 LGD 0.1730
21 H4 24.0900 -18.8080 -1.7620 H 1 LGD 0.0690
22 H5 23.0890 -19.8070 0.9600 H 1 LGD 0.0771
23 H6 24.7850 -21.7910 1.5410 H 1 LGD 0.4185
24 H7 25.9340 -17.2730 4.6290 H 1 LGD 0.1471
25 H8 22.6380 -16.8400 -1.2720 H 1 LGD 0.0363
26 H9 21.6820 -18.3290 -1.3630 H 1 LGD 0.0363
27 H10 22.0670 -20.9470 -0.5970 H 1 LGD 0.4148
28 H11 21.2300 -16.8750 0.4760 H 1 LGD 0.4116
29 H12 29.6350 -17.2550 4.8380 H 1 LGD 0.4373
30 H13 28.1570 -16.8230 5.6390 H 1 LGD 0.4373
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 5 10 1
10 5 11 2
11 6 12 2
12 7 13 1
13 8 14 1
14 10 15 2
15 13 16 1
16 15 17 1
17 7 8 1
18 12 15 1
19 1 18 1
20 4 19 1
21 6 20 1
22 7 21 1
23 8 22 1
24 9 23 1
25 12 24 1
26 13 25 1
27 13 26 1
28 14 27 1
29 16 28 1
30 17 29 1
31 17 30 1