@COMMENT
LIGANDBOX_ID = D03637-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03637
NAME = Cytarabine_hydrochloride_(USAN)
MOLECULAR_FORMULA = C9H13N3O5
MOLECULAR_WEIGHT = 243.219
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 128.6100
HOMO = -9.1059
LUMO = 0.2007
mLOGD = -0.038
mLOGPA = -6.177
mLOGS = -0.825
@MOLECULE
D03637-02
30 31 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.5251 0.0805 -1.1299 C.3 1 LGD 0.2979
2 N1 1.2714 0.4804 0.1004 N.am 1 LGD -0.4094
3 O1 0.0364 -1.2722 -0.9899 O.3 1 LGD -0.3761
4 C2 -0.7435 0.9230 -1.4626 C.3 1 LGD 0.1131
5 C3 2.6544 0.3058 0.1241 C.2 1 LGD 0.8676
6 C4 0.6090 0.9393 1.2387 C.2 1 LGD 0.0548
7 C5 -1.3056 -1.2151 -0.4780 C.3 1 LGD 0.1063
8 C6 -1.9161 -0.0642 -1.2983 C.3 1 LGD 0.0672
9 O2 -0.6983 1.4304 -2.7955 O.3 1 LGD -0.5806
10 N2 3.3210 0.6704 1.2905 N.2 1 LGD -0.7694
11 O3 3.2741 -0.1354 -0.8281 O.2 1 LGD -0.5955
12 C7 1.3070 1.2824 2.3757 C.2 1 LGD -0.4080
13 C8 -2.0041 -2.5886 -0.6494 C.3 1 LGD 0.1462
14 O4 -3.0408 0.5321 -0.6544 O.3 1 LGD -0.6031
15 C9 2.7374 1.1416 2.3752 C.2 1 LGD 0.7572
16 O5 -2.0372 -3.0009 -2.0154 O.3 1 LGD -0.5927
17 N3 3.4856 1.4776 3.4664 N.pl3 1 LGD -0.9109
18 H1 1.2240 0.1255 -1.9733 H 1 LGD 0.1497
19 H2 -0.8458 1.7610 -0.7634 H 1 LGD 0.0576
20 H3 -0.4672 0.9942 1.1554 H 1 LGD 0.1582
21 H4 -1.2896 -0.9534 0.5869 H 1 LGD 0.0553
22 H5 -2.2065 -0.4387 -2.2885 H 1 LGD 0.0863
23 H6 -1.4713 2.0109 -2.9097 H 1 LGD 0.4194
24 H7 0.7906 1.6475 3.2560 H 1 LGD 0.1481
25 H8 -1.4694 -3.3351 -0.0487 H 1 LGD 0.0318
26 H9 -3.0266 -2.5196 -0.2576 H 1 LGD 0.0318
27 H10 -3.8210 -0.0083 -0.8714 H 1 LGD 0.4170
28 H11 -2.4217 -3.8945 -2.0405 H 1 LGD 0.4092
29 H12 4.4797 1.5652 3.3197 H 1 LGD 0.4355
30 H13 3.0498 2.0573 4.1667 H 1 LGD 0.4355
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 5 10 1
10 5 11 2
11 6 12 2
12 7 13 1
13 8 14 1
14 10 15 2
15 13 16 1
16 15 17 1
17 7 8 1
18 12 15 1
19 1 18 1
20 4 19 1
21 6 20 1
22 7 21 1
23 8 22 1
24 9 23 1
25 12 24 1
26 13 25 1
27 13 26 1
28 14 27 1
29 16 28 1
30 17 29 1
31 17 30 1