@COMMENT
LIGANDBOX_ID = D03637-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03637
NAME = Cytarabine_hydrochloride_(USAN)
MOLECULAR_FORMULA = C9H13N3O5
MOLECULAR_WEIGHT = 243.219
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 128.6100
HOMO = -9.1059
LUMO = 0.2007
mLOGD = -0.038
mLOGPA = -6.177
mLOGS = -0.825
@MOLECULE
D03637-03
30 31 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.2858 -0.0145 -0.5993 C.3 1 LGD 0.3182
2 N1 0.9953 0.4396 0.6242 N.am 1 LGD -0.3800
3 O1 -0.7533 0.9276 -0.9579 O.3 1 LGD -0.4269
4 C2 -0.4428 -1.3891 -0.4683 C.3 1 LGD 0.1094
5 C3 2.3813 0.3434 0.6923 C.2 1 LGD 0.8723
6 C4 0.2666 0.9254 1.7042 C.2 1 LGD 0.0931
7 C5 -1.8190 0.2363 -1.6414 C.3 1 LGD 0.1209
8 C6 -1.9027 -1.0818 -0.8436 C.3 1 LGD 0.0751
9 O2 -0.3590 -1.9817 0.8302 O.3 1 LGD -0.5886
10 N2 2.9848 0.7574 1.8764 N.2 1 LGD -0.7743
11 O3 3.0530 -0.0836 -0.2308 O.2 1 LGD -0.6122
12 C7 0.9016 1.3220 2.8614 C.2 1 LGD -0.4240
13 C8 -1.5263 0.1159 -3.1745 C.3 1 LGD 0.1266
14 O4 -2.5288 -2.1509 -1.5542 O.3 1 LGD -0.5837
15 C9 2.3359 1.2215 2.9278 C.2 1 LGD 0.7625
16 O5 -0.3439 -0.6247 -3.4779 O.3 1 LGD -0.6009
17 N3 3.0249 1.5940 4.0460 N.pl3 1 LGD -0.9146
18 H1 1.0124 -0.0646 -1.4178 H 1 LGD 0.1295
19 H2 -0.0114 -2.0726 -1.2106 H 1 LGD 0.0869
20 H3 -0.8051 0.9431 1.5503 H 1 LGD 0.1613
21 H4 -2.7545 0.7956 -1.5158 H 1 LGD 0.0807
22 H5 -2.4624 -0.8769 0.0785 H 1 LGD 0.0504
23 H6 -0.7889 -2.8532 0.7744 H 1 LGD 0.4185
24 H7 0.3359 1.6944 3.7076 H 1 LGD 0.1458
25 H8 -2.3873 -0.3636 -3.6566 H 1 LGD 0.0313
26 H9 -1.4444 1.1258 -3.5953 H 1 LGD 0.0313
27 H10 -3.4870 -1.9798 -1.5581 H 1 LGD 0.4076
28 H11 -0.3275 -0.7674 -4.4404 H 1 LGD 0.4140
29 H12 4.0235 1.6966 3.9478 H 1 LGD 0.4349
30 H13 2.5434 2.1658 4.7224 H 1 LGD 0.4349
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 5 10 1
10 5 11 2
11 6 12 2
12 7 13 1
13 8 14 1
14 10 15 2
15 13 16 1
16 15 17 1
17 7 8 1
18 12 15 1
19 1 18 1
20 4 19 1
21 6 20 1
22 7 21 1
23 8 22 1
24 9 23 1
25 12 24 1
26 13 25 1
27 13 26 1
28 14 27 1
29 16 28 1
30 17 29 1
31 17 30 1