@COMMENT
LIGANDBOX_ID = D03637-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03637
NAME = Cytarabine_hydrochloride_(USAN)
MOLECULAR_FORMULA = C9H13N3O5
MOLECULAR_WEIGHT = 243.219
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 128.6100
HOMO = -9.1059
LUMO = 0.2007
mLOGD = -0.038
mLOGPA = -6.177
mLOGS = -0.825
@MOLECULE
D03637-04
30 31 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.5996 -0.1840 -1.0187 C.3 1 LGD 0.3134
2 N1 1.3161 0.1901 0.2267 N.am 1 LGD -0.3768
3 O1 -0.4834 0.7371 -1.2733 O.3 1 LGD -0.4006
4 C2 -0.0709 -1.5932 -1.0029 C.3 1 LGD 0.0782
5 C3 2.7037 0.1068 0.2696 C.2 1 LGD 0.8724
6 C4 0.5981 0.6149 1.3391 C.2 1 LGD 0.0988
7 C5 -1.5028 0.0187 -1.9872 C.3 1 LGD 0.1465
8 C6 -1.5773 -1.3276 -1.2245 C.3 1 LGD 0.0706
9 O2 0.2049 -2.3751 0.1652 O.3 1 LGD -0.5609
10 N2 3.3226 0.4920 1.4552 N.2 1 LGD -0.7776
11 O3 3.3641 -0.2816 -0.6785 O.2 1 LGD -0.6228
12 C7 1.2488 0.9878 2.4959 C.2 1 LGD -0.4297
13 C8 -2.8056 0.8641 -2.0874 C.3 1 LGD 0.1594
14 O4 -2.2618 -1.1882 0.0257 O.3 1 LGD -0.5580
15 C9 2.6861 0.9166 2.5307 C.2 1 LGD 0.7618
16 O5 -3.2044 1.4167 -0.8324 O.3 1 LGD -0.5755
17 N3 3.3911 1.2802 3.6419 N.pl3 1 LGD -0.9130
18 H1 1.3082 -0.1306 -1.8531 H 1 LGD 0.1037
19 H2 0.3018 -2.1348 -1.8816 H 1 LGD 0.0500
20 H3 -0.4766 0.6193 1.2062 H 1 LGD 0.1863
21 H4 -1.1516 -0.1842 -3.0077 H 1 LGD 0.0518
22 H5 -2.0371 -2.1068 -1.8455 H 1 LGD 0.0501
23 H6 -0.4448 -3.0984 0.1930 H 1 LGD 0.4028
24 H7 0.6931 1.3254 3.3630 H 1 LGD 0.1476
25 H8 -2.6383 1.6768 -2.8053 H 1 LGD 0.0268
26 H9 -3.6083 0.2331 -2.4891 H 1 LGD 0.0268
27 H10 -2.7341 -2.0207 0.1996 H 1 LGD 0.3999
28 H11 -4.0380 1.8968 -0.9769 H 1 LGD 0.4016
29 H12 4.3840 1.4095 3.5207 H 1 LGD 0.4332
30 H13 2.9136 1.8393 4.3317 H 1 LGD 0.4332
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 5 10 1
10 5 11 2
11 6 12 2
12 7 13 1
13 8 14 1
14 10 15 2
15 13 16 1
16 15 17 1
17 7 8 1
18 12 15 1
19 1 18 1
20 4 19 1
21 6 20 1
22 7 21 1
23 8 22 1
24 9 23 1
25 12 24 1
26 13 25 1
27 13 26 1
28 14 27 1
29 16 28 1
30 17 29 1
31 17 30 1