@COMMENT
LIGANDBOX_ID = D03840-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03840
NAME = Palinavir_(USAN/INN)
MOLECULAR_FORMULA = C41H52N6O5
MOLECULAR_WEIGHT = 708.904
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 5
TPSA = 145.7800
HOMO = -10.8357
LUMO = -3.8418
mLOGPA = -6.102
mLOGS = -3.936
mLOGD = 2.780
@MOLECULE
D03840-01
105 109 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 33.6970 -15.0230 5.7530 C.ar 1 LGD -0.1132
2 C2 33.1320 -14.1900 4.7770 C.ar 1 LGD -0.1084
3 C3 32.3530 -14.7400 3.7470 C.ar 1 LGD -0.1759
4 C4 32.1270 -16.1270 3.6730 C.ar 1 LGD 0.4069
5 C5 32.7030 -16.9590 4.6640 C.ar 1 LGD -0.1354
6 C6 33.4830 -16.4080 5.6970 C.ar 1 LGD -0.1122
7 N1 31.3800 -16.6400 2.6720 N.ar 1 LGD -0.6888
8 C7 31.1730 -17.9750 2.6040 C.ar 1 LGD 0.3721
9 C8 31.7160 -18.8620 3.5540 C.ar 1 LGD -0.2036
10 C9 32.4900 -18.3460 4.6020 C.ar 1 LGD -0.0765
11 C10 30.3700 -18.4970 1.4400 C.2 1 LGD 0.5686
12 N2 29.7880 -17.5880 0.5670 N.am 1 LGD -0.5943
13 C11 29.4220 -17.9550 -0.8100 C.3 1 LGD 0.0675
14 C12 30.7240 -18.2210 -1.5800 C.2 1 LGD 0.6537
15 N3 31.6770 -17.2130 -1.6000 N.am 1 LGD -0.6037
16 C13 32.9570 -17.3290 -2.3090 C.3 1 LGD 0.0801
17 C14 34.0480 -17.8230 -1.3070 C.3 1 LGD 0.1133
18 C15 35.4480 -17.9830 -1.9580 C.3 1 LGD 0.1138
19 N4 35.4430 -18.8170 -3.1880 N.4 1 LGD -0.6635
20 O1 30.2410 -19.6920 1.2320 O.2 1 LGD -0.5599
21 C16 28.5830 -16.8100 -1.4600 C.3 1 LGD -0.0699
22 C17 28.2740 -17.1050 -2.9510 C.3 1 LGD -0.0911
23 C18 27.2620 -16.5620 -0.6860 C.3 1 LGD -0.0911
24 O2 30.9410 -19.2830 -2.1400 O.2 1 LGD -0.5871
25 C19 33.2700 -15.9630 -2.9790 C.3 1 LGD -0.0411
26 C20 32.1090 -15.4880 -3.8490 C.ar 1 LGD -0.0981
27 O3 34.1510 -16.9300 -0.1960 O.3 1 LGD -0.5875
28 C21 36.7150 -18.7130 -3.9400 C.3 1 LGD 0.0798
29 C22 36.6000 -19.3650 -5.3330 C.3 1 LGD -0.1341
30 C23 36.1510 -20.8440 -5.2490 C.3 1 LGD 0.1402
31 C24 34.8880 -21.0000 -4.3620 C.3 1 LGD -0.0906
32 C25 34.9140 -20.2090 -3.0190 C.3 1 LGD 0.0640
33 O4 37.2020 -21.6520 -4.6840 O.3 1 LGD -0.4428
34 C26 38.2910 -21.9950 -5.5610 C.3 1 LGD 0.1827
35 C27 39.1710 -23.0200 -4.8610 C.ar 1 LGD -0.0760
36 C28 38.6140 -24.1810 -4.2950 C.ar 1 LGD -0.2315
37 C29 39.4600 -25.0960 -3.6450 C.ar 1 LGD 0.4045
38 N5 40.7920 -24.9170 -3.5400 N.ar 1 LGD -0.6468
39 C30 41.3280 -23.8060 -4.0850 C.ar 1 LGD 0.4045
40 C31 40.5610 -22.8340 -4.7520 C.ar 1 LGD -0.2315
41 C32 35.5800 -20.9820 -1.8570 C.2 1 LGD 0.6493
42 C33 31.3090 -14.4040 -3.4390 C.ar 1 LGD -0.1253
43 C34 30.2150 -13.9970 -4.2190 C.ar 1 LGD -0.1169
44 C35 29.9150 -14.6690 -5.4130 C.ar 1 LGD -0.1145
45 C36 30.7090 -15.7500 -5.8280 C.ar 1 LGD -0.1169
46 C37 31.8020 -16.1580 -5.0480 C.ar 1 LGD -0.1253
47 N6 36.9460 -21.2410 -1.8990 N.am 1 LGD -0.5857
48 O5 34.9170 -21.3350 -0.8980 O.2 1 LGD -0.5332
49 C38 37.7660 -21.7640 -0.7890 C.3 1 LGD 0.1451
50 C39 37.6140 -20.8770 0.4800 C.3 1 LGD -0.1049
51 C40 39.2370 -21.6960 -1.2720 C.3 1 LGD -0.1049
52 C41 37.3870 -23.2420 -0.4990 C.3 1 LGD -0.1049
53 H1 34.3000 -14.5970 6.5500 H 1 LGD 0.1455
54 H2 33.2970 -13.1170 4.8180 H 1 LGD 0.1451
55 H3 31.9220 -14.0840 2.9960 H 1 LGD 0.1445
56 H4 33.9230 -17.0510 6.4540 H 1 LGD 0.1444
57 H5 31.5470 -19.9330 3.4800 H 1 LGD 0.1705
58 H6 32.9200 -19.0110 5.3450 H 1 LGD 0.1533
59 H7 29.8140 -16.6100 0.8150 H 1 LGD 0.3304
60 H8 28.8330 -18.8810 -0.8070 H 1 LGD 0.1207
61 H9 31.4670 -16.3470 -1.1260 H 1 LGD 0.3264
62 H10 32.8570 -18.0710 -3.1110 H 1 LGD 0.0598
63 H11 33.7330 -18.8050 -0.9330 H 1 LGD 0.0820
64 H12 35.8300 -16.9820 -2.1980 H 1 LGD 0.1121
65 H13 36.1340 -18.4150 -1.2180 H 1 LGD 0.1121
66 H14 29.1700 -15.8830 -1.4220 H 1 LGD 0.0402
67 H15 29.1960 -17.1770 -3.5420 H 1 LGD 0.0453
68 H16 27.7240 -18.0490 -3.0590 H 1 LGD 0.0453
69 H17 27.6660 -16.3030 -3.3890 H 1 LGD 0.0453
70 H18 27.4590 -16.2420 0.3450 H 1 LGD 0.0453
71 H19 26.6720 -15.7720 -1.1690 H 1 LGD 0.0453
72 H20 26.6500 -17.4720 -0.6520 H 1 LGD 0.0453
73 H21 33.4990 -15.2150 -2.2100 H 1 LGD 0.0483
74 H22 34.1710 -16.0560 -3.5990 H 1 LGD 0.0483
75 H23 33.2870 -16.9320 0.2540 H 1 LGD 0.4462
76 H24 36.9790 -17.6560 -4.0760 H 1 LGD 0.1038
77 H25 37.5310 -19.1850 -3.3780 H 1 LGD 0.1038
78 H26 35.8640 -18.8050 -5.9240 H 1 LGD 0.0841
79 H27 37.5540 -19.2770 -5.8660 H 1 LGD 0.0841
80 H28 35.9120 -21.2110 -6.2560 H 1 LGD 0.0814
81 H29 34.0290 -20.6420 -4.9440 H 1 LGD 0.0989
82 H30 34.6970 -22.0630 -4.1650 H 1 LGD 0.0989
83 H31 33.8610 -20.1360 -2.7190 H 1 LGD 0.1430
84 H32 37.9070 -22.4290 -6.4920 H 1 LGD 0.0469
85 H33 38.8800 -21.1030 -5.8070 H 1 LGD 0.0469
86 H34 37.5450 -24.3670 -4.3500 H 1 LGD 0.1455
87 H35 39.0570 -26.0020 -3.1930 H 1 LGD 0.0352
88 H36 42.4060 -23.6910 -3.9820 H 1 LGD 0.0352
89 H37 41.0390 -21.9530 -5.1700 H 1 LGD 0.1455
90 H38 31.5280 -13.8830 -2.5110 H 1 LGD 0.1217
91 H39 29.5990 -13.1630 -3.8960 H 1 LGD 0.1431
92 H40 29.0670 -14.3550 -6.0160 H 1 LGD 0.1459
93 H41 30.4750 -16.2730 -6.7510 H 1 LGD 0.1431
94 H42 32.4070 -17.0010 -5.3710 H 1 LGD 0.1217
95 H43 37.4160 -21.0450 -2.7730 H 1 LGD 0.3225
96 H44 37.7750 -19.8190 0.2390 H 1 LGD 0.0496
97 H45 36.6210 -20.9760 0.9340 H 1 LGD 0.0496
98 H46 38.3490 -21.1640 1.2430 H 1 LGD 0.0496
99 H47 39.3880 -22.3220 -2.1580 H 1 LGD 0.0496
100 H48 39.5200 -20.6680 -1.5330 H 1 LGD 0.0496
101 H49 39.9260 -22.0490 -0.4930 H 1 LGD 0.0496
102 H50 37.4530 -23.8490 -1.4120 H 1 LGD 0.0496
103 H51 38.0650 -23.6790 0.2450 H 1 LGD 0.0496
104 H52 36.3660 -23.3300 -0.1080 H 1 LGD 0.0496
105 H53 35.0840 -18.2747 -3.9476 H 1 LGD 0.4418
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 4 7 1
8 7 8 2
9 8 9 1
10 9 10 2
11 5 10 1
12 8 11 1
13 11 12 am
14 12 13 1
15 13 14 1
16 14 15 am
17 15 16 1
18 16 17 1
19 17 18 1
20 18 19 1
21 11 20 2
22 13 21 1
23 21 22 1
24 21 23 1
25 14 24 2
26 16 25 1
27 25 26 1
28 17 27 1
29 19 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 31 32 1
34 19 32 1
35 30 33 1
36 33 34 1
37 34 35 1
38 35 36 ar
39 36 37 ar
40 37 38 ar
41 38 39 ar
42 39 40 ar
43 35 40 ar
44 32 41 1
45 26 42 ar
46 42 43 ar
47 43 44 ar
48 44 45 ar
49 45 46 ar
50 26 46 ar
51 41 47 am
52 41 48 2
53 47 49 1
54 49 50 1
55 49 51 1
56 49 52 1
57 1 53 1
58 2 54 1
59 3 55 1
60 6 56 1
61 9 57 1
62 10 58 1
63 12 59 1
64 13 60 1
65 15 61 1
66 16 62 1
67 17 63 1
68 18 64 1
69 18 65 1
70 21 66 1
71 22 67 1
72 22 68 1
73 22 69 1
74 23 70 1
75 23 71 1
76 23 72 1
77 25 73 1
78 25 74 1
79 27 75 1
80 28 76 1
81 28 77 1
82 29 78 1
83 29 79 1
84 30 80 1
85 31 81 1
86 31 82 1
87 32 83 1
88 34 84 1
89 34 85 1
90 36 86 1
91 37 87 1
92 39 88 1
93 40 89 1
94 42 90 1
95 43 91 1
96 44 92 1
97 45 93 1
98 46 94 1
99 47 95 1
100 50 96 1
101 50 97 1
102 50 98 1
103 51 99 1
104 51 100 1
105 51 101 1
106 52 102 1
107 52 103 1
108 52 104 1
109 19 105 1