@COMMENT
LIGANDBOX_ID = D03865-08
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D03865
NAME = Dirithromycin_(USP/INN)_Dynabac_(TN)_ABBR______DTM
MOLECULAR_FORMULA = C42H78N2O14
MOLECULAR_WEIGHT = 835.086
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 14
NUM_OF_CHIRAL_ATOMS = 20
TPSA = 196.3300
HOMO = -13.9303
LUMO = -5.9937
mLOGD = 1.231
mLOGS = -1.462
mLOGPA = -4.570
@MOLECULE
D03865-08
138 141 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.0028 -3.1362 0.7360 C.3 1 LGD 0.1303
2 O1 -2.1981 -1.7193 0.5194 O.3 1 LGD -0.4709
3 C2 1.7941 -3.3988 1.7807 C.3 1 LGD -0.1007
4 C3 1.2137 -2.2274 0.9362 C.3 1 LGD -0.1038
5 C4 0.4064 -2.6910 -0.3320 C.3 1 LGD 0.1658
6 C5 -0.8121 -3.6932 -0.1485 C.3 1 LGD 0.1655
7 C6 2.4108 -1.2983 0.5135 C.3 1 LGD 0.1150
8 N1 3.2170 -2.0341 -0.4978 N.4 1 LGD -0.7755
9 C7 2.4222 -2.4688 -1.6686 C.3 1 LGD 0.2814
10 O2 1.3577 -3.3185 -1.2169 O.3 1 LGD -0.3802
11 C8 -1.8721 -3.3425 2.2751 C.3 1 LGD -0.0824
12 C9 -3.1272 -2.8616 3.0395 C.3 1 LGD -0.0923
13 O3 -3.7370 -1.9062 -1.1761 O.2 1 LGD -0.4801
14 C10 -3.1093 -1.2289 -0.3795 C.2 1 LGD 0.6468
15 C11 -1.3800 -4.0483 -1.5522 C.3 1 LGD -0.1276
16 O4 -0.3593 -4.9387 0.3893 O.3 1 LGD -0.5914
17 O5 3.5509 -2.5545 -3.8400 O.3 1 LGD -0.3892
18 C12 3.2913 -3.3085 -2.6367 C.3 1 LGD 0.1248
19 C13 5.9383 -2.0509 -3.6130 C.3 1 LGD 0.0919
20 C14 4.5061 -1.4747 -3.7650 C.3 1 LGD 0.0925
21 C15 6.7906 -0.9217 -1.6358 C.3 1 LGD 0.1079
22 O6 6.2832 -2.1375 -2.2147 O.3 1 LGD -0.4585
23 C16 -3.3163 0.2820 -0.1664 C.3 1 LGD -0.1273
24 C17 -1.9768 1.0893 -0.3115 C.3 1 LGD 0.1671
25 C18 1.2408 0.9753 1.0718 C.3 1 LGD -0.0857
26 C19 2.0640 0.1564 0.0084 C.3 1 LGD -0.0682
27 C20 3.3906 0.8907 -0.3521 C.3 1 LGD -0.1105
28 C21 0.7691 2.4420 0.6882 C.3 1 LGD 0.1591
29 C22 1.7789 3.4535 1.3105 C.3 1 LGD -0.0869
30 C23 -1.9687 2.5344 0.3192 C.3 1 LGD -0.1108
31 C24 -0.6814 2.8731 1.1882 C.3 1 LGD 0.1298
32 C25 -4.5664 0.8361 -0.9066 C.3 1 LGD -0.0908
33 O7 -1.3437 1.0125 -1.6218 O.3 1 LGD -0.4792
34 C26 -2.0461 1.3635 -2.8368 C.3 1 LGD 0.3469
35 C27 -1.0885 2.1245 -3.8048 C.3 1 LGD -0.0981
36 C28 -0.6246 1.2827 -5.0361 C.3 1 LGD 0.1425
37 C29 -0.3106 -0.1816 -4.5835 C.3 1 LGD 0.0966
38 C30 -1.4852 -0.8274 -3.7793 C.3 1 LGD 0.1595
39 O8 -2.5023 0.1559 -3.4778 O.3 1 LGD -0.4206
40 C31 -2.1700 -1.9674 -4.5637 C.3 1 LGD -0.0952
41 O9 0.5962 1.9120 -5.5194 O.3 1 LGD -0.4515
42 C32 -1.6914 1.3466 -6.1748 C.3 1 LGD -0.1124
43 O10 0.8628 -0.1784 -3.7657 O.3 1 LGD -0.6414
44 C33 1.2561 1.3526 -6.6785 C.3 1 LGD 0.1201
45 C34 -2.2641 3.6895 -0.6824 C.3 1 LGD -0.0971
46 O11 0.8093 2.6219 -0.7256 O.3 1 LGD -0.6017
47 O12 -0.8838 2.5989 2.6077 O.3 1 LGD -0.4687
48 C35 -1.4085 1.3303 3.0735 C.3 1 LGD 0.3601
49 O13 -2.8083 1.4597 3.4231 O.3 1 LGD -0.4241
50 C36 -3.1912 2.4964 4.3676 C.3 1 LGD 0.1696
51 C37 -2.0619 2.7342 5.4116 C.3 1 LGD -0.1252
52 C38 -1.2348 1.4479 5.6607 C.3 1 LGD 0.0784
53 C39 -0.6238 0.8701 4.3356 C.3 1 LGD 0.1177
54 C40 -3.5974 3.7829 3.6079 C.3 1 LGD -0.1155
55 N2 -0.2418 1.6787 6.7476 N.4 1 LGD -0.6656
56 O14 -0.6756 -0.5543 4.4080 O.3 1 LGD -0.5723
57 C41 0.3861 0.4171 7.1908 C.3 1 LGD 0.0838
58 C42 0.8253 2.6458 6.4040 C.3 1 LGD 0.0838
59 H1 -2.9170 -3.6716 0.4478 H 1 LGD 0.0831
60 H2 2.5088 -3.0217 2.5228 H 1 LGD 0.0545
61 H3 1.0103 -3.9266 2.3348 H 1 LGD 0.0545
62 H4 2.3189 -4.1283 1.1509 H 1 LGD 0.0545
63 H5 0.5441 -1.6748 1.5977 H 1 LGD 0.0918
64 H6 0.0158 -1.7914 -0.8247 H 1 LGD 0.0760
65 H7 3.0428 -1.1690 1.3941 H 1 LGD 0.0833
66 H8 3.9869 -1.4582 -0.8060 H 1 LGD 0.4559
67 H9 2.0006 -1.6062 -2.1870 H 1 LGD 0.1395
68 H10 -1.7262 -4.4060 2.5003 H 1 LGD 0.0493
69 H11 -1.0018 -2.8107 2.6691 H 1 LGD 0.0493
70 H12 -3.0360 -3.0936 4.1078 H 1 LGD 0.0435
71 H13 -3.2608 -1.7768 2.9407 H 1 LGD 0.0435
72 H14 -4.0297 -3.3571 2.6593 H 1 LGD 0.0435
73 H15 -1.6937 -3.1506 -2.0858 H 1 LGD 0.0626
74 H16 -0.6359 -4.5595 -2.1763 H 1 LGD 0.0626
75 H17 -2.2521 -4.7100 -1.4739 H 1 LGD 0.0626
76 H18 -1.1395 -5.4178 0.7182 H 1 LGD 0.4231
77 H19 2.7442 -4.2200 -2.9091 H 1 LGD 0.0987
78 H20 4.2248 -3.6217 -2.1540 H 1 LGD 0.0987
79 H21 5.9831 -3.0467 -4.0720 H 1 LGD 0.0843
80 H22 6.6562 -1.4082 -4.1394 H 1 LGD 0.0843
81 H23 4.2603 -0.7903 -2.9469 H 1 LGD 0.0553
82 H24 4.4613 -0.9042 -4.7009 H 1 LGD 0.0553
83 H25 6.9764 -1.0681 -0.5647 H 1 LGD 0.0390
84 H26 7.7351 -0.6383 -2.1177 H 1 LGD 0.0390
85 H27 6.0746 -0.1014 -1.7597 H 1 LGD 0.0390
86 H28 -3.5735 0.3572 0.8982 H 1 LGD 0.0764
87 H29 -1.3164 0.5210 0.3324 H 1 LGD 0.0503
88 H30 0.3780 0.3815 1.3354 H 1 LGD 0.0350
89 H31 1.8209 1.0147 2.0032 H 1 LGD 0.0350
90 H32 1.4590 0.0709 -0.9026 H 1 LGD 0.0924
91 H33 4.0177 1.0213 0.5390 H 1 LGD 0.0520
92 H34 3.9704 0.3321 -1.0905 H 1 LGD 0.0520
93 H35 3.2155 1.8764 -0.7946 H 1 LGD 0.0520
94 H36 2.8119 3.2374 1.0167 H 1 LGD 0.0491
95 H37 1.5548 4.4814 0.9969 H 1 LGD 0.0491
96 H38 1.7367 3.4239 2.4070 H 1 LGD 0.0491
97 H39 -2.8152 2.5701 1.0143 H 1 LGD 0.0775
98 H40 -0.6416 3.9687 1.1444 H 1 LGD 0.0993
99 H41 -5.4699 0.3340 -0.5379 H 1 LGD 0.0605
100 H42 -4.6984 1.9081 -0.7235 H 1 LGD 0.0605
101 H43 -4.5266 0.6645 -1.9869 H 1 LGD 0.0605
102 H44 -2.9030 2.0039 -2.6121 H 1 LGD 0.0903
103 H45 -1.5923 3.0344 -4.1550 H 1 LGD 0.0723
104 H46 -0.2087 2.4695 -3.2481 H 1 LGD 0.0723
105 H47 -0.1175 -0.7927 -5.4742 H 1 LGD 0.0642
106 H48 -1.0914 -1.2364 -2.8418 H 1 LGD 0.0426
107 H49 -3.0193 -2.3707 -3.9981 H 1 LGD 0.0569
108 H50 -2.5423 -1.6105 -5.5320 H 1 LGD 0.0569
109 H51 -1.4640 -2.7873 -4.7467 H 1 LGD 0.0569
110 H52 -1.4972 0.5892 -6.9446 H 1 LGD 0.0564
111 H53 -2.7054 1.1726 -5.7955 H 1 LGD 0.0564
112 H54 -1.6870 2.3324 -6.6571 H 1 LGD 0.0564
113 H55 1.3794 0.6008 -4.0410 H 1 LGD 0.4249
114 H56 0.6046 1.3962 -7.5597 H 1 LGD 0.0423
115 H57 2.1632 1.9285 -6.8982 H 1 LGD 0.0423
116 H58 1.5487 0.3108 -6.5001 H 1 LGD 0.0423
117 H59 -3.2154 3.5414 -1.2039 H 1 LGD 0.0540
118 H60 -2.3458 4.6459 -0.1505 H 1 LGD 0.0540
119 H61 -1.4705 3.7974 -1.4301 H 1 LGD 0.0540
120 H62 0.1168 2.0487 -1.1070 H 1 LGD 0.4419
121 H63 -1.3189 0.5638 2.3041 H 1 LGD 0.1156
122 H64 -4.0780 2.1391 4.9065 H 1 LGD 0.0901
123 H65 -1.4050 3.5416 5.0644 H 1 LGD 0.0746
124 H66 -2.5074 3.0776 6.3537 H 1 LGD 0.0746
125 H67 -1.9432 0.7039 6.0307 H 1 LGD 0.1176
126 H68 0.4175 1.1936 4.2230 H 1 LGD 0.0536
127 H69 -2.7417 4.2595 3.1158 H 1 LGD 0.0609
128 H70 -4.3521 3.5565 2.8444 H 1 LGD 0.0609
129 H71 -4.0312 4.5127 4.3027 H 1 LGD 0.0609
130 H72 -0.3182 -0.8223 5.2717 H 1 LGD 0.4058
131 H73 1.0134 0.6083 8.0636 H 1 LGD 0.1037
132 H74 -0.3882 -0.3051 7.4568 H 1 LGD 0.1037
133 H75 1.0047 0.0112 6.3884 H 1 LGD 0.1037
134 H76 1.4831 2.7801 7.2649 H 1 LGD 0.1037
135 H77 1.4109 2.2747 5.5618 H 1 LGD 0.1037
136 H78 0.3834 3.6085 6.1427 H 1 LGD 0.1037
137 H79 3.5923 -2.8618 -0.0575 H 1 LGD 0.4559
138 H80 -0.7507 2.0556 7.5371 H 1 LGD 0.4571
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 5 6 1
5 1 6 1
6 4 7 1
7 7 8 1
8 8 9 1
9 9 10 1
10 5 10 1
11 1 11 1
12 11 12 1
13 13 14 2
14 2 14 1
15 6 15 1
16 6 16 1
17 17 18 1
18 9 18 1
19 19 20 1
20 17 20 1
21 21 22 1
22 19 22 1
23 14 23 1
24 23 24 1
25 25 26 1
26 7 26 1
27 26 27 1
28 25 28 1
29 28 29 1
30 24 30 1
31 30 31 1
32 28 31 1
33 23 32 1
34 24 33 1
35 33 34 1
36 34 35 1
37 35 36 1
38 36 37 1
39 37 38 1
40 38 39 1
41 34 39 1
42 38 40 1
43 36 41 1
44 36 42 1
45 37 43 1
46 41 44 1
47 30 45 1
48 28 46 1
49 31 47 1
50 47 48 1
51 48 49 1
52 49 50 1
53 50 51 1
54 51 52 1
55 52 53 1
56 48 53 1
57 50 54 1
58 52 55 1
59 53 56 1
60 55 57 1
61 55 58 1
62 1 59 1
63 3 60 1
64 3 61 1
65 3 62 1
66 4 63 1
67 5 64 1
68 7 65 1
69 8 66 1
70 9 67 1
71 11 68 1
72 11 69 1
73 12 70 1
74 12 71 1
75 12 72 1
76 15 73 1
77 15 74 1
78 15 75 1
79 16 76 1
80 18 77 1
81 18 78 1
82 19 79 1
83 19 80 1
84 20 81 1
85 20 82 1
86 21 83 1
87 21 84 1
88 21 85 1
89 23 86 1
90 24 87 1
91 25 88 1
92 25 89 1
93 26 90 1
94 27 91 1
95 27 92 1
96 27 93 1
97 29 94 1
98 29 95 1
99 29 96 1
100 30 97 1
101 31 98 1
102 32 99 1
103 32 100 1
104 32 101 1
105 34 102 1
106 35 103 1
107 35 104 1
108 37 105 1
109 38 106 1
110 40 107 1
111 40 108 1
112 40 109 1
113 42 110 1
114 42 111 1
115 42 112 1
116 43 113 1
117 44 114 1
118 44 115 1
119 44 116 1
120 45 117 1
121 45 118 1
122 45 119 1
123 46 120 1
124 48 121 1
125 50 122 1
126 51 123 1
127 51 124 1
128 52 125 1
129 53 126 1
130 54 127 1
131 54 128 1
132 54 129 1
133 56 130 1
134 57 131 1
135 57 132 1
136 57 133 1
137 58 134 1
138 58 135 1
139 58 136 1
140 8 137 1
141 55 138 1