@COMMENT
LIGANDBOX_ID = D04486-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D04486
NAME = Ibandronate_sodium_(USAN)_Ibandronate_sodium_hydrate_(JAN)_Ibandronate_sodium_monohydrate_Bondronat_(TN)_Boniva_(TN)_Bonviva_(TN)
MOLECULAR_FORMULA = C9H22NO7P2
MOLECULAR_WEIGHT = 318.223
MOLECULAR_CHARGE = -1
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 141.3600
HOMO = 4.4110
LUMO = 7.2106
mLOGPA = -5.412
mLOGD = -1.251
mLOGS = -0.612
@MOLECULE
D04486-01
39 38 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 P1 -0.3980 0.5020 1.1020 P.3 1 LGD 0.9918
2 O1 0.0440 0.9800 2.4380 O.co2 1 LGD -0.8147
3 O2 -1.7610 1.1760 0.5730 O.co2 1 LGD -0.8147
4 O3 0.6060 0.8680 -0.1030 O.co2 1 LGD -0.8147
5 C1 -0.7040 -1.3500 1.0170 C.3 1 LGD 0.0212
6 P2 -0.9900 -1.8820 -0.7550 P.3 1 LGD 0.9918
7 C2 -1.9200 -1.7750 1.8950 C.3 1 LGD -0.0657
8 O4 0.4760 -2.0170 1.4850 O.3 1 LGD -0.5880
9 O5 -2.0400 -0.8330 -1.3800 O.co2 1 LGD -0.8147
10 O6 -1.3840 -3.3090 -0.8760 O.co2 1 LGD -0.8147
11 O7 0.3550 -1.4940 -1.5490 O.co2 1 LGD -0.8147
12 C3 -1.7570 -1.4830 3.4140 C.3 1 LGD 0.0478
13 N1 -2.7900 -2.1580 4.2430 N.4 1 LGD -0.6404
14 C4 -2.5130 -2.1380 5.7020 C.3 1 LGD 0.0496
15 C5 -4.1680 -1.7030 3.9540 C.3 1 LGD 0.0707
16 C6 -1.2120 -2.8810 6.1100 C.3 1 LGD -0.0853
17 C7 -1.1660 -4.3460 5.6040 C.3 1 LGD -0.0826
18 C8 0.1350 -5.0660 6.0310 C.3 1 LGD -0.0746
19 C9 0.1850 -6.5210 5.5200 C.3 1 LGD -0.0899
20 H1 -2.8190 -1.2730 1.5190 H 1 LGD 0.0252
21 H2 -2.0900 -2.8520 1.7660 H 1 LGD 0.0252
22 H3 0.3820 -2.9620 1.2710 H 1 LGD 0.3364
23 H4 -0.7620 -1.8270 3.7140 H 1 LGD 0.0791
24 H5 -1.7990 -0.4010 3.5900 H 1 LGD 0.0791
25 H6 -2.4560 -1.1000 6.0550 H 1 LGD 0.0208
26 H7 -3.3460 -2.6170 6.2340 H 1 LGD 0.0208
27 H8 -4.2640 -0.6260 4.1430 H 1 LGD 0.0371
28 H9 -4.4390 -1.9060 2.9120 H 1 LGD 0.0371
29 H10 -4.8860 -2.2340 4.5920 H 1 LGD 0.0371
30 H11 -0.3310 -2.3340 5.7540 H 1 LGD 0.0382
31 H12 -1.1430 -2.8810 7.2060 H 1 LGD 0.0382
32 H13 -2.0340 -4.8930 5.9930 H 1 LGD 0.0436
33 H14 -1.2390 -4.3630 4.5090 H 1 LGD 0.0436
34 H15 1.0020 -4.5180 5.6410 H 1 LGD 0.0342
35 H16 0.2170 -5.0630 7.1250 H 1 LGD 0.0342
36 H17 1.1210 -7.0040 5.8260 H 1 LGD 0.0249
37 H18 -0.6500 -7.1060 5.9270 H 1 LGD 0.0249
38 H19 0.1260 -6.5520 4.4250 H 1 LGD 0.0249
39 H20 -2.6457 -3.1467 4.2016 H 1 LGD 0.3372
@BOND
1 1 2 2
2 1 3 1
3 1 4 1
4 1 5 1
5 5 6 1
6 5 7 1
7 5 8 1
8 6 9 1
9 6 10 2
10 6 11 1
11 7 12 1
12 12 13 1
13 13 14 1
14 13 15 1
15 14 16 1
16 16 17 1
17 17 18 1
18 18 19 1
19 7 20 1
20 7 21 1
21 8 22 1
22 12 23 1
23 12 24 1
24 14 25 1
25 14 26 1
26 15 27 1
27 15 28 1
28 15 29 1
29 16 30 1
30 16 31 1
31 17 32 1
32 17 33 1
33 18 34 1
34 18 35 1
35 19 36 1
36 19 37 1
37 19 38 1
38 13 39 1