@COMMENT
LIGANDBOX_ID = D05198-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05198
NAME = Nogalamycin_(USAN/INN)
MOLECULAR_FORMULA = C39H49NO16
MOLECULAR_WEIGHT = 787.812
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 16
NUM_OF_CHIRAL_ATOMS = 13
TPSA = 229.4400
HOMO = -11.0531
LUMO = -4.5809
mLOGS = -1.286
mLOGPA = -5.619
mLOGD = 1.078
@MOLECULE
D05198-04
106 112 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.3494 -1.0064 -2.2331 C.ar 1 LGD 0.0086
2 C2 -0.4622 -1.9471 -1.6604 C.ar 1 LGD -0.0686
3 C3 -1.9448 -0.0278 -1.4217 C.ar 1 LGD -0.1162
4 C4 -1.7279 -1.0367 -3.7155 C.3 1 LGD -0.0982
5 C5 0.2455 -3.0134 -2.5194 C.3 1 LGD 0.2243
6 C6 -0.2051 -1.8882 -0.2700 C.ar 1 LGD 0.2213
7 C7 -1.6649 0.0493 -0.0474 C.ar 1 LGD -0.0871
8 C8 -0.6528 -1.7302 -4.6043 C.3 1 LGD 0.1822
9 C9 -0.2753 -3.1027 -3.9854 C.3 1 LGD -0.1423
10 C10 -0.7959 -0.8861 0.5407 C.ar 1 LGD -0.2449
11 O1 0.6352 -2.8076 0.2915 O.3 1 LGD -0.4874
12 C11 -2.3073 1.1228 0.7838 C.2 1 LGD 0.5886
13 O2 -1.1832 -1.9584 -5.9102 O.3 1 LGD -0.5830
14 C12 -0.5203 -0.7927 2.0225 C.2 1 LGD 0.6230
15 C13 -1.6359 1.4781 2.0903 C.ar 1 LGD -0.0784
16 O3 -3.3401 1.6563 0.4140 O.2 1 LGD -0.4788
17 C14 -0.7680 0.5380 2.6995 C.ar 1 LGD -0.1968
18 O4 -0.1324 -1.7623 2.6553 O.2 1 LGD -0.5596
19 C15 -0.1443 0.8526 3.9348 C.ar 1 LGD 0.1823
20 C16 -1.1875 3.0512 3.9688 C.ar 1 LGD -0.1315
21 C17 -0.3502 2.0927 4.5519 C.ar 1 LGD -0.1114
22 O5 0.6991 -0.0297 4.5476 O.3 1 LGD -0.4877
23 O6 1.6626 -2.7188 -2.5116 O.3 1 LGD -0.4532
24 C18 0.5881 -0.8113 -4.7685 C.3 1 LGD -0.0827
25 C19 -1.8604 2.7313 2.7133 C.ar 1 LGD 0.1007
26 O7 -2.7811 3.6552 2.1544 O.3 1 LGD -0.2399
27 C20 -2.9908 4.6162 3.1547 C.3 1 LGD 0.2490
28 O8 -1.7615 5.2560 3.4926 O.3 1 LGD -0.3880
29 C21 -1.3204 4.5116 4.5999 C.3 1 LGD 0.2246
30 C22 2.5573 -3.7617 -2.9618 C.3 1 LGD 0.3219
31 O9 3.1253 -3.3701 -4.2329 O.3 1 LGD -0.4095
32 C23 3.9726 -2.1960 -4.2053 C.3 1 LGD 0.1302
33 C24 5.1940 -2.4287 -3.2453 C.3 1 LGD 0.1289
34 C25 5.1310 -3.8089 -2.5124 C.3 1 LGD 0.2054
35 C26 3.6910 -3.9677 -1.9044 C.3 1 LGD 0.1047
36 C27 4.4270 -1.9160 -5.6542 C.3 1 LGD -0.0916
37 O10 5.1966 -1.3760 -2.2517 O.3 1 LGD -0.4360
38 O11 3.5585 -5.2640 -1.2778 O.3 1 LGD -0.4287
39 C28 2.4877 -5.4011 -0.3298 C.3 1 LGD 0.1274
40 C29 6.2482 -3.9140 -1.4296 C.3 1 LGD -0.1045
41 O12 5.4100 -4.7888 -3.5628 O.3 1 LGD -0.4396
42 C30 5.6391 -0.0860 -2.7124 C.3 1 LGD 0.1276
43 C31 5.4217 -6.2066 -3.2897 C.3 1 LGD 0.1449
44 C32 -3.1207 -1.6769 -3.8684 C.2 1 LGD 0.6389
45 O13 -3.8657 -1.0430 -4.8242 O.3 1 LGD -0.4173
46 O14 -3.5208 -2.6083 -3.1879 O.2 1 LGD -0.5243
47 C33 -5.2068 -1.4959 -5.0804 C.3 1 LGD 0.1273
48 C34 -4.1563 5.4424 3.5893 C.3 1 LGD 0.1958
49 C35 -2.4819 4.8166 5.7124 C.3 1 LGD 0.1362
50 C36 -3.7415 5.7190 5.1262 C.3 1 LGD 0.0118
51 C37 0.0721 5.0955 4.9686 C.3 1 LGD -0.0750
52 O15 -1.9303 5.4489 6.8680 O.3 1 LGD -0.5571
53 N1 -4.9808 5.6665 5.9521 N.4 1 LGD -0.6627
54 O16 -4.2529 6.6554 2.8497 O.3 1 LGD -0.5708
55 C38 -4.8294 6.3284 7.2641 C.3 1 LGD 0.0806
56 C39 -5.4914 4.2940 6.1646 C.3 1 LGD 0.0806
57 H1 -2.6287 0.6875 -1.8711 H 1 LGD 0.1616
58 H2 -1.8198 0.0004 -4.0655 H 1 LGD 0.1006
59 H3 0.0844 -3.9913 -2.0485 H 1 LGD 0.0592
60 H4 -1.1636 -3.7469 -3.9839 H 1 LGD 0.0712
61 H5 0.4542 -3.6127 -4.6262 H 1 LGD 0.0712
62 H6 0.6168 -2.6734 1.2579 H 1 LGD 0.4555
63 H7 -1.5955 -2.8397 -5.9082 H 1 LGD 0.4081
64 H8 0.1620 2.3110 5.4845 H 1 LGD 0.1690
65 H9 0.6695 -0.8669 4.0464 H 1 LGD 0.4690
66 H10 1.0156 -0.5262 -3.7998 H 1 LGD 0.0539
67 H11 0.3211 0.1145 -5.2941 H 1 LGD 0.0539
68 H12 1.3675 -1.3153 -5.3517 H 1 LGD 0.0539
69 H13 -3.3014 3.8648 3.8930 H 1 LGD -0.0076
70 H14 2.0052 -4.6997 -3.0948 H 1 LGD 0.0847
71 H15 3.3872 -1.3367 -3.8551 H 1 LGD 0.0557
72 H16 6.1316 -2.3884 -3.8157 H 1 LGD 0.0666
73 H17 3.5809 -3.1949 -1.1320 H 1 LGD 0.0730
74 H18 3.5619 -1.7682 -6.3121 H 1 LGD 0.0475
75 H19 5.0178 -2.7534 -6.0469 H 1 LGD 0.0475
76 H20 5.0445 -1.0102 -5.6984 H 1 LGD 0.0475
77 H21 2.4988 -6.4105 0.0988 H 1 LGD 0.0326
78 H22 1.5178 -5.2421 -0.8154 H 1 LGD 0.0326
79 H23 2.6077 -4.6766 0.4852 H 1 LGD 0.0326
80 H24 6.2044 -4.8695 -0.8934 H 1 LGD 0.0491
81 H25 6.1474 -3.1246 -0.6744 H 1 LGD 0.0491
82 H26 7.2423 -3.8219 -1.8849 H 1 LGD 0.0491
83 H27 4.9703 0.2996 -3.4917 H 1 LGD 0.0324
84 H28 6.6567 -0.1544 -3.1174 H 1 LGD 0.0324
85 H29 5.6433 0.6246 -1.8768 H 1 LGD 0.0324
86 H30 4.4044 -6.5797 -3.1244 H 1 LGD 0.0341
87 H31 6.0451 -6.4423 -2.4197 H 1 LGD 0.0341
88 H32 5.8325 -6.7398 -4.1557 H 1 LGD 0.0341
89 H33 -5.6664 -0.8788 -5.8622 H 1 LGD 0.0505
90 H34 -5.8150 -1.4190 -4.1701 H 1 LGD 0.0505
91 H35 -5.1982 -2.5404 -5.4167 H 1 LGD 0.0505
92 H36 -5.0820 4.8583 3.5140 H 1 LGD 0.1086
93 H37 -2.8761 3.8390 6.0151 H 1 LGD 0.0527
94 H38 -3.3926 6.7531 5.1484 H 1 LGD 0.1230
95 H39 0.7872 4.9300 4.1525 H 1 LGD 0.0706
96 H40 0.4768 4.6235 5.8722 H 1 LGD 0.0706
97 H41 0.0131 6.1772 5.1451 H 1 LGD 0.0706
98 H42 -2.6561 5.8907 7.3391 H 1 LGD 0.4011
99 H43 -3.3534 6.8778 2.5487 H 1 LGD 0.4558
100 H44 -4.1745 5.7379 7.9065 H 1 LGD 0.1056
101 H45 -5.8074 6.4129 7.7419 H 1 LGD 0.1056
102 H46 -4.4102 7.3271 7.1277 H 1 LGD 0.1056
103 H47 -5.6159 3.7906 5.2045 H 1 LGD 0.1056
104 H48 -6.4578 4.3410 6.6705 H 1 LGD 0.1056
105 H49 -4.7918 3.7281 6.7818 H 1 LGD 0.1056
106 H50 -5.6879 6.1820 5.4423 H 1 LGD 0.4613
@BOND
1 1 2 ar
2 1 3 ar
3 1 4 1
4 2 5 1
5 2 6 ar
6 3 7 ar
7 4 8 1
8 5 9 1
9 6 10 ar
10 6 11 1
11 7 12 1
12 8 13 1
13 10 14 1
14 12 15 1
15 12 16 2
16 14 17 1
17 14 18 2
18 17 19 ar
19 19 21 ar
20 7 10 ar
21 8 9 1
22 15 17 ar
23 20 21 ar
24 19 22 1
25 5 23 1
26 8 24 1
27 15 25 ar
28 20 25 ar
29 25 26 1
30 26 27 1
31 27 28 1
32 28 29 1
33 20 29 1
34 23 30 1
35 30 31 1
36 31 32 1
37 32 33 1
38 33 34 1
39 34 35 1
40 30 35 1
41 32 36 1
42 33 37 1
43 35 38 1
44 38 39 1
45 34 41 1
46 34 40 1
47 37 42 1
48 41 43 1
49 4 44 1
50 44 45 1
51 44 46 2
52 45 47 1
53 27 48 1
54 29 49 1
55 49 50 1
56 48 50 1
57 29 51 1
58 49 52 1
59 50 53 1
60 48 54 1
61 53 55 1
62 53 56 1
63 3 57 1
64 4 58 1
65 5 59 1
66 9 60 1
67 9 61 1
68 11 62 1
69 13 63 1
70 21 64 1
71 22 65 1
72 24 66 1
73 24 67 1
74 24 68 1
75 27 69 1
76 30 70 1
77 32 71 1
78 33 72 1
79 35 73 1
80 36 74 1
81 36 75 1
82 36 76 1
83 39 77 1
84 39 78 1
85 39 79 1
86 40 80 1
87 40 81 1
88 40 82 1
89 42 83 1
90 42 84 1
91 42 85 1
92 43 86 1
93 43 87 1
94 43 88 1
95 47 89 1
96 47 90 1
97 47 91 1
98 48 92 1
99 49 93 1
100 50 94 1
101 51 95 1
102 51 96 1
103 51 97 1
104 52 98 1
105 54 99 1
106 55 100 1
107 55 101 1
108 55 102 1
109 56 103 1
110 56 104 1
111 56 105 1
112 53 106 1