@COMMENT
LIGANDBOX_ID = D05385-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05385
NAME = Pegamotecan_(USAN)_Prothecan_(TN)
MOLECULAR_FORMULA = C52H48N6O14
MOLECULAR_WEIGHT = 980.984
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 16
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 248.2600
HOMO = -8.5830
LUMO = -1.2356
mLOGS = -3.895
mLOGD = 1.930
mLOGPA = -6.427
@MOLECULE
D05385-02
120 129 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -4.7322 2.9827 0.1975 C.3 1 LGD 0.1251
2 C2 -6.8051 3.3407 2.0743 C.3 1 LGD 0.2112
3 O1 -6.9635 3.9117 0.7650 O.3 1 LGD -0.4258
4 C3 -5.9682 3.8657 -0.1790 C.2 1 LGD 0.7425
5 C4 -5.1622 1.7974 1.0728 C.2 1 LGD -0.0006
6 C5 -6.2311 1.9551 1.9463 C.2 1 LGD -0.2557
7 O2 -6.0849 4.4397 -1.2491 O.2 1 LGD -0.5326
8 C6 -4.4988 0.5026 1.0099 C.2 1 LGD -0.1385
9 C7 -5.0509 -0.4760 1.8046 C.2 1 LGD -0.0360
10 N1 -6.1666 -0.3351 2.5954 N.am 1 LGD -0.3458
11 C8 -6.8197 0.8665 2.7722 C.2 1 LGD 0.7318
12 C9 -4.5587 -1.8362 1.8818 C.ar 1 LGD 0.4538
13 C10 -5.4210 -2.5477 2.6952 C.ar 1 LGD -0.2335
14 C11 -6.5191 -1.6313 3.2196 C.3 1 LGD 0.1496
15 N2 -3.4638 -2.3412 1.2897 N.ar 1 LGD -0.6138
16 C12 -3.2134 -3.6596 1.4955 C.ar 1 LGD 0.4095
17 C13 -4.0778 -4.4795 2.2845 C.ar 1 LGD -0.1421
18 C14 -5.2087 -3.9103 2.9079 C.ar 1 LGD -0.0523
19 C15 -2.0732 -4.2576 0.9251 C.ar 1 LGD -0.1622
20 C16 -1.8066 -5.6251 1.0956 C.ar 1 LGD -0.1168
21 C17 -2.6764 -6.4227 1.8511 C.ar 1 LGD -0.1214
22 C18 -3.8071 -5.8500 2.4503 C.ar 1 LGD -0.1153
23 O3 -7.7717 1.0008 3.5218 O.2 1 LGD -0.6238
24 C19 -3.9743 2.5759 -1.1172 C.3 1 LGD -0.0943
25 C20 -4.7747 1.6633 -2.0839 C.3 1 LGD -0.0878
26 C21 -0.1917 -3.6852 -3.8435 C.3 1 LGD 0.2112
27 O4 -1.1066 -3.3230 -2.7926 O.3 1 LGD -0.4258
28 C22 -1.0341 -2.1362 -2.1056 C.2 1 LGD 0.7425
29 C23 0.2977 -1.3428 -2.2764 C.3 1 LGD 0.1251
30 C24 1.4470 -2.2453 -2.6825 C.2 1 LGD -0.0006
31 C25 1.2257 -3.3947 -3.4270 C.2 1 LGD -0.2557
32 O5 -1.9164 -1.7962 -1.3388 O.2 1 LGD -0.5326
33 C26 2.8055 -1.8616 -2.3589 C.2 1 LGD -0.1385
34 C27 3.7763 -2.7021 -2.8415 C.2 1 LGD -0.0360
35 N3 3.5640 -3.8536 -3.5608 N.am 1 LGD -0.3458
36 C28 2.3051 -4.2964 -3.9194 C.2 1 LGD 0.7318
37 C29 5.1876 -2.4114 -2.7625 C.ar 1 LGD 0.4538
38 C30 5.8594 -3.4108 -3.4401 C.ar 1 LGD -0.2335
39 C31 4.8631 -4.4357 -3.9762 C.3 1 LGD 0.1496
40 N4 5.7550 -1.3232 -2.2168 N.ar 1 LGD -0.6138
41 C32 7.0997 -1.2139 -2.3465 C.ar 1 LGD 0.4095
42 C33 7.8774 -2.1979 -3.0317 C.ar 1 LGD -0.1421
43 C34 7.2444 -3.3289 -3.5933 C.ar 1 LGD -0.0523
44 C35 7.7619 -0.0940 -1.8105 C.ar 1 LGD -0.1622
45 C36 9.1508 0.0592 -1.9464 C.ar 1 LGD -0.1168
46 C37 9.9033 -0.9113 -2.6226 C.ar 1 LGD -0.1214
47 C38 9.2687 -2.0388 -3.1636 C.ar 1 LGD -0.1153
48 O6 2.1181 -5.2997 -4.5860 O.2 1 LGD -0.6238
49 O7 0.6814 -0.7592 -0.9936 O.3 1 LGD -0.4497
50 C39 0.0996 -0.2343 -3.3690 C.3 1 LGD -0.0943
51 C40 1.2427 0.8061 -3.4768 C.3 1 LGD -0.0878
52 C41 0.0278 0.2516 -0.3383 C.2 1 LGD 0.6436
53 C42 0.6600 0.5334 1.0314 C.3 1 LGD 0.0839
54 O8 -0.9176 0.8774 -0.7769 O.2 1 LGD -0.4938
55 N5 2.0454 0.9983 0.8729 N.am 1 LGD -0.5798
56 C43 2.3533 2.3232 0.6043 C.2 1 LGD 0.6586
57 C44 3.8235 2.7416 0.6055 C.3 1 LGD 0.0647
58 O9 1.4631 3.1249 0.3749 O.2 1 LGD -0.6003
59 O10 4.4843 2.3984 1.8454 O.3 1 LGD -0.4223
60 C45 4.0755 3.1174 3.0316 C.3 1 LGD 0.1029
61 C46 3.0587 2.2670 3.8425 C.3 1 LGD 0.1029
62 O11 1.7049 2.6577 3.5361 O.3 1 LGD -0.4223
63 C47 1.2415 3.8608 4.1813 C.3 1 LGD 0.0647
64 C48 -0.1998 4.1592 3.7637 C.2 1 LGD 0.6586
65 N6 -0.4762 4.2818 2.4114 N.am 1 LGD -0.5798
66 C49 -1.7924 4.6880 1.8894 C.3 1 LGD 0.0839
67 C50 -2.6384 3.4658 1.4835 C.2 1 LGD 0.6436
68 O12 -3.8444 3.8551 0.9542 O.3 1 LGD -0.4497
69 C51 0.6331 -0.7074 1.9520 C.3 1 LGD -0.1045
70 O13 -1.0899 4.3010 4.5847 O.2 1 LGD -0.6003
71 C52 -1.5459 5.6253 0.6834 C.3 1 LGD -0.1045
72 O14 -2.2666 2.3120 1.6100 O.2 1 LGD -0.4938
73 H1 -6.1216 3.9605 2.6686 H 1 LGD 0.0822
74 H2 -7.7765 3.3224 2.5836 H 1 LGD 0.0822
75 H3 -3.6373 0.3076 0.3815 H 1 LGD 0.1942
76 H4 -7.5099 -1.9592 2.8805 H 1 LGD 0.0837
77 H5 -6.4865 -1.5501 4.3132 H 1 LGD 0.0837
78 H6 -5.8825 -4.4988 3.5244 H 1 LGD 0.1483
79 H7 -1.3821 -3.6563 0.3445 H 1 LGD 0.1518
80 H8 -0.9244 -6.0658 0.6396 H 1 LGD 0.1403
81 H9 -2.4708 -7.4819 1.9778 H 1 LGD 0.1374
82 H10 -4.4727 -6.4722 3.0423 H 1 LGD 0.1372
83 H11 -3.0401 2.0722 -0.8690 H 1 LGD 0.0691
84 H12 -3.6745 3.4827 -1.6586 H 1 LGD 0.0691
85 H13 -5.6839 2.1562 -2.4470 H 1 LGD 0.0413
86 H14 -4.1600 1.4146 -2.9581 H 1 LGD 0.0413
87 H15 -5.0669 0.7213 -1.6060 H 1 LGD 0.0413
88 H16 -0.3152 -4.7505 -4.0760 H 1 LGD 0.0822
89 H17 -0.4255 -3.1126 -4.7496 H 1 LGD 0.0822
90 H18 3.0431 -0.9509 -1.8201 H 1 LGD 0.1942
91 H19 4.9146 -4.5116 -5.0697 H 1 LGD 0.0837
92 H20 5.0069 -5.4179 -3.5085 H 1 LGD 0.0837
93 H21 7.8000 -4.0889 -4.1359 H 1 LGD 0.1483
94 H22 7.1900 0.6683 -1.2885 H 1 LGD 0.1518
95 H23 9.6428 0.9335 -1.5295 H 1 LGD 0.1403
96 H24 10.9774 -0.7886 -2.7295 H 1 LGD 0.1374
97 H25 9.8578 -2.7851 -3.6896 H 1 LGD 0.1372
98 H26 -0.0169 -0.7176 -4.3472 H 1 LGD 0.0691
99 H27 -0.8464 0.2942 -3.2001 H 1 LGD 0.0691
100 H28 1.4386 1.2958 -2.5152 H 1 LGD 0.0413
101 H29 2.1717 0.3409 -3.8269 H 1 LGD 0.0413
102 H30 0.9723 1.5868 -4.1985 H 1 LGD 0.0413
103 H31 0.0689 1.3215 1.5130 H 1 LGD 0.1157
104 H32 2.8021 0.3527 1.0446 H 1 LGD 0.3384
105 H33 4.3171 2.2199 -0.2238 H 1 LGD 0.0646
106 H34 3.8894 3.8218 0.4228 H 1 LGD 0.0646
107 H35 4.9593 3.2800 3.6609 H 1 LGD 0.0605
108 H36 3.6655 4.1021 2.7742 H 1 LGD 0.0605
109 H37 3.2010 1.2056 3.6039 H 1 LGD 0.0605
110 H38 3.2473 2.3942 4.9163 H 1 LGD 0.0605
111 H39 1.2758 3.7470 5.2724 H 1 LGD 0.0646
112 H40 1.8622 4.7171 3.8911 H 1 LGD 0.0646
113 H41 0.2640 4.0775 1.7522 H 1 LGD 0.3384
114 H42 -2.3535 5.2443 2.6510 H 1 LGD 0.1157
115 H43 1.2338 -1.5266 1.5366 H 1 LGD 0.0547
116 H44 1.0330 -0.4591 2.9435 H 1 LGD 0.0547
117 H45 -0.3956 -1.0673 2.0821 H 1 LGD 0.0547
118 H46 -2.4907 6.0176 0.2869 H 1 LGD 0.0547
119 H47 -0.9257 6.4814 0.9784 H 1 LGD 0.0547
120 H48 -1.0302 5.0917 -0.1258 H 1 LGD 0.0547
@BOND
1 2 3 1
2 3 4 1
3 5 6 2
4 2 6 1
5 4 7 2
6 5 8 1
7 8 9 2
8 9 10 1
9 10 11 am
10 6 11 1
11 9 12 1
12 12 13 ar
13 13 14 1
14 10 14 1
15 12 15 ar
16 15 16 ar
17 16 17 ar
18 17 18 ar
19 13 18 ar
20 16 19 ar
21 19 20 ar
22 20 21 ar
23 21 22 ar
24 17 22 ar
25 11 23 2
26 1 4 1
27 1 5 1
28 24 25 1
29 1 24 1
30 26 27 1
31 27 28 1
32 28 29 1
33 29 30 1
34 30 31 2
35 26 31 1
36 28 32 2
37 30 33 1
38 33 34 2
39 34 35 1
40 35 36 am
41 31 36 1
42 34 37 1
43 37 38 ar
44 38 39 1
45 35 39 1
46 37 40 ar
47 40 41 ar
48 41 42 ar
49 42 43 ar
50 38 43 ar
51 41 44 ar
52 44 45 ar
53 45 46 ar
54 46 47 ar
55 42 47 ar
56 36 48 2
57 29 49 1
58 29 50 1
59 50 51 1
60 49 52 1
61 52 53 1
62 52 54 2
63 53 55 1
64 55 56 am
65 56 57 1
66 56 58 2
67 57 59 1
68 59 60 1
69 60 61 1
70 61 62 1
71 62 63 1
72 63 64 1
73 64 65 am
74 65 66 1
75 66 67 1
76 67 68 1
77 53 69 1
78 64 70 2
79 66 71 1
80 67 72 2
81 1 68 1
82 2 73 1
83 2 74 1
84 8 75 1
85 14 76 1
86 14 77 1
87 18 78 1
88 19 79 1
89 20 80 1
90 21 81 1
91 22 82 1
92 24 83 1
93 24 84 1
94 25 85 1
95 25 86 1
96 25 87 1
97 26 88 1
98 26 89 1
99 33 90 1
100 39 91 1
101 39 92 1
102 43 93 1
103 44 94 1
104 45 95 1
105 46 96 1
106 47 97 1
107 50 98 1
108 50 99 1
109 51 100 1
110 51 101 1
111 51 102 1
112 53 103 1
113 55 104 1
114 57 105 1
115 57 106 1
116 60 107 1
117 60 108 1
118 61 109 1
119 61 110 1
120 63 111 1
121 63 112 1
122 65 113 1
123 66 114 1
124 69 115 1
125 69 116 1
126 69 117 1
127 71 118 1
128 71 119 1
129 71 120 1