@COMMENT
LIGANDBOX_ID = D05406-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05406
NAME = Penamecillin_(USAN/INN)
MOLECULAR_FORMULA = C19H22N2O6S
MOLECULAR_WEIGHT = 406.458
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 1
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 102.0100
HOMO = -9.2985
LUMO = -0.1598
mLOGS = -2.767
mLOGPA = -4.956
mLOGD = 2.092
@MOLECULE
D05406-02
50 52 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.8288 1.0161 1.3534 C.3 1 LGD 0.0633
2 C2 0.5698 0.5771 0.8395 C.2 1 LGD 0.6628
3 N1 0.6952 1.6931 0.0335 N.am 1 LGD -0.4470
4 C3 -0.6339 2.2238 0.3708 C.3 1 LGD 0.1604
5 C4 1.0990 1.6947 -1.3785 C.3 1 LGD 0.0514
6 C5 -0.1869 1.4438 -2.2233 C.3 1 LGD 0.0470
7 S1 -1.5080 2.3264 -1.2786 S.3 1 LGD -0.3528
8 C6 -0.0679 2.0689 -3.6346 C.3 1 LGD -0.0785
9 C7 -0.6244 -0.0471 -2.3322 C.3 1 LGD -0.0785
10 C8 2.3306 0.7981 -1.6407 C.2 1 LGD 0.6699
11 O1 3.4365 1.3043 -1.0187 O.3 1 LGD -0.4194
12 O2 2.3373 -0.2097 -2.3283 O.2 1 LGD -0.5064
13 N2 -1.8875 0.0937 0.9195 N.am 1 LGD -0.5856
14 C9 -3.2094 0.2523 1.2991 C.2 1 LGD 0.6797
15 O3 1.3229 -0.3792 0.8932 O.2 1 LGD -0.5418
16 O4 -3.5188 1.1467 2.0677 O.2 1 LGD -0.5854
17 C10 -4.2401 -0.7264 0.7400 C.3 1 LGD -0.0959
18 C11 -4.3202 -1.9789 1.6021 C.ar 1 LGD -0.0929
19 C12 -3.5788 -3.1264 1.2628 C.ar 1 LGD -0.1159
20 C13 -3.6437 -4.2745 2.0692 C.ar 1 LGD -0.1271
21 C14 -4.4487 -4.2813 3.2193 C.ar 1 LGD -0.1228
22 C15 -5.1889 -3.1391 3.5627 C.ar 1 LGD -0.1271
23 C16 -5.1242 -1.9908 2.7568 C.ar 1 LGD -0.1159
24 C17 4.6779 0.5917 -1.1377 C.3 1 LGD 0.3624
25 O5 5.6910 1.3432 -0.4501 O.3 1 LGD -0.4361
26 C18 6.9632 0.8497 -0.4249 C.2 1 LGD 0.6501
27 C19 7.9056 1.7784 0.3351 C.3 1 LGD -0.1446
28 O6 7.3135 -0.1984 -0.9415 O.2 1 LGD -0.5232
29 H1 -0.8741 1.2616 2.4198 H 1 LGD 0.1244
30 H2 -0.6210 3.2165 0.8290 H 1 LGD 0.1212
31 H3 1.4355 2.7168 -1.5947 H 1 LGD 0.1042
32 H4 -1.0075 1.9570 -4.1907 H 1 LGD 0.0520
33 H5 0.1618 3.1402 -3.5729 H 1 LGD 0.0520
34 H6 0.7289 1.5824 -4.2116 H 1 LGD 0.0520
35 H7 -1.6774 -0.1165 -2.6339 H 1 LGD 0.0520
36 H8 -0.0403 -0.5857 -3.0877 H 1 LGD 0.0520
37 H9 -0.5151 -0.5778 -1.3805 H 1 LGD 0.0520
38 H10 -1.6537 -0.6574 0.2871 H 1 LGD 0.3252
39 H11 -5.2153 -0.2255 0.6893 H 1 LGD 0.0737
40 H12 -3.9638 -0.9817 -0.2912 H 1 LGD 0.0737
41 H13 -2.9504 -3.1291 0.3765 H 1 LGD 0.1344
42 H14 -3.0692 -5.1575 1.8039 H 1 LGD 0.1350
43 H15 -4.4975 -5.1688 3.8437 H 1 LGD 0.1335
44 H16 -5.8104 -3.1424 4.4536 H 1 LGD 0.1350
45 H17 -5.6958 -1.1085 3.0315 H 1 LGD 0.1344
46 H18 4.5780 -0.3998 -0.6800 H 1 LGD 0.0612
47 H19 4.9479 0.4946 -2.1962 H 1 LGD 0.0612
48 H20 7.5168 1.9629 1.3443 H 1 LGD 0.0736
49 H21 8.9035 1.3291 0.4139 H 1 LGD 0.0736
50 H22 7.9857 2.7387 -0.1891 H 1 LGD 0.0736
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 1 4 1
5 3 5 1
6 5 6 1
7 6 7 1
8 4 7 1
9 6 8 1
10 6 9 1
11 5 10 1
12 10 11 1
13 10 12 2
14 1 13 1
15 13 14 am
16 2 15 2
17 14 16 2
18 14 17 1
19 17 18 1
20 18 19 ar
21 19 20 ar
22 20 21 ar
23 21 22 ar
24 22 23 ar
25 18 23 ar
26 11 24 1
27 24 25 1
28 25 26 1
29 26 27 1
30 26 28 2
31 1 29 1
32 4 30 1
33 5 31 1
34 8 32 1
35 8 33 1
36 8 34 1
37 9 35 1
38 9 36 1
39 9 37 1
40 13 38 1
41 17 39 1
42 17 40 1
43 19 41 1
44 20 42 1
45 21 43 1
46 22 44 1
47 23 45 1
48 24 46 1
49 24 47 1
50 27 48 1
51 27 49 1
52 27 50 1