@COMMENT
LIGANDBOX_ID = D05413-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05413
NAME = Penicillin_V_hydrabamine_(USP)
MOLECULAR_FORMULA = C42H64N2
MOLECULAR_WEIGHT = 596.988
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 0
NUM_OF_CHIRAL_ATOMS = 6
TPSA = 24.0600
HOMO = -12.8194
LUMO = -7.3481
mLOGPA = -2.836
mLOGD = 2.819
mLOGS = -2.386
@MOLECULE
D05413-02
110 115 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 2.3522 -0.9178 -3.8000 C.ar 1 LGD -0.1167
2 C2 2.1101 -0.4530 -5.0998 C.ar 1 LGD -0.0441
3 C3 1.2815 0.6718 -5.2725 C.ar 1 LGD -0.1154
4 C4 0.6869 1.3184 -4.1706 C.ar 1 LGD -0.0818
5 C5 0.9245 0.8397 -2.8566 C.ar 1 LGD -0.0994
6 C6 1.7669 -0.2855 -2.6975 C.ar 1 LGD -0.1192
7 C7 2.6942 -1.2213 -6.2904 C.3 1 LGD -0.0269
8 C8 3.2631 -0.2969 -7.3944 C.3 1 LGD -0.0871
9 C9 1.6421 -2.1950 -6.8707 C.3 1 LGD -0.0871
10 C10 -0.2044 2.5284 -4.4514 C.3 1 LGD -0.0276
11 C11 -1.1383 2.9154 -3.2875 C.3 1 LGD -0.0737
12 C12 -0.3727 2.8670 -1.9327 C.3 1 LGD -0.0541
13 C13 0.1647 1.4122 -1.6328 C.3 1 LGD 0.0296
14 C14 -1.0531 3.6280 -0.7050 C.3 1 LGD -0.0563
15 C15 -0.0251 3.6402 0.4657 C.3 1 LGD -0.0792
16 C16 0.4890 2.2320 0.8381 C.3 1 LGD -0.0817
17 C17 1.0980 1.4817 -0.3725 C.3 1 LGD -0.0785
18 C18 -2.3829 3.0169 -0.1442 C.3 1 LGD 0.0926
19 N1 -3.4015 2.8041 -1.1893 N.4 1 LGD -0.7577
20 C19 -4.6592 2.2116 -0.6750 C.3 1 LGD 0.0789
21 C20 -4.4915 0.6999 -0.3872 C.3 1 LGD 0.0834
22 N2 -4.1177 0.4745 1.0234 N.4 1 LGD -0.7512
23 C21 -3.3749 -0.7980 1.1557 C.3 1 LGD 0.0763
24 C22 -2.8310 -1.0828 2.6113 C.3 1 LGD -0.0452
25 C23 -2.6463 0.2782 3.3558 C.3 1 LGD -0.0830
26 C24 -1.9663 0.1448 4.7166 C.3 1 LGD -0.0693
27 C25 -0.5596 -0.4223 4.5389 C.3 1 LGD -0.0775
28 C26 -0.4958 -1.8437 3.8836 C.3 1 LGD 0.0296
29 C27 -1.4678 -1.9596 2.5981 C.3 1 LGD -0.0541
30 C28 1.0220 -2.0960 3.5860 C.ar 1 LGD -0.0994
31 C29 1.5006 -2.4494 2.3056 C.ar 1 LGD -0.0914
32 C30 0.5430 -2.7026 1.1756 C.3 1 LGD -0.0265
33 C31 -0.6710 -1.7866 1.2743 C.3 1 LGD -0.0862
34 C32 1.9833 -1.9240 4.6130 C.ar 1 LGD -0.1192
35 C33 3.3581 -2.0321 4.3575 C.ar 1 LGD -0.1141
36 C34 3.8219 -2.3324 3.0689 C.ar 1 LGD -0.0441
37 C35 2.8805 -2.5614 2.0533 C.ar 1 LGD -0.1154
38 C36 5.3247 -2.3901 2.7804 C.3 1 LGD -0.0269
39 C37 5.7436 -1.2890 1.7756 C.3 1 LGD -0.0871
40 C38 5.7584 -3.7883 2.2799 C.3 1 LGD -0.0871
41 C39 -1.3421 5.1147 -1.0762 C.3 1 LGD -0.1089
42 C40 -0.9779 0.3872 -1.3842 C.3 1 LGD -0.0942
43 C41 -0.9240 -2.9169 4.9332 C.3 1 LGD -0.0920
44 C42 -3.9801 -1.8815 3.3012 C.3 1 LGD -0.1042
45 H1 2.9727 -1.7954 -3.6410 H 1 LGD 0.1499
46 H2 1.0702 1.0376 -6.2727 H 1 LGD 0.1430
47 H3 1.9465 -0.7167 -1.7190 H 1 LGD 0.1320
48 H4 3.5338 -1.8306 -5.9307 H 1 LGD 0.0621
49 H5 2.4673 0.2571 -7.9071 H 1 LGD 0.0408
50 H6 3.9696 0.4260 -6.9675 H 1 LGD 0.0408
51 H7 3.7987 -0.8869 -8.1490 H 1 LGD 0.0408
52 H8 2.0684 -2.7910 -7.6876 H 1 LGD 0.0408
53 H9 1.2894 -2.8877 -6.0957 H 1 LGD 0.0408
54 H10 0.7732 -1.6490 -7.2596 H 1 LGD 0.0408
55 H11 0.4360 3.3882 -4.6872 H 1 LGD 0.0708
56 H12 -0.8141 2.3488 -5.3462 H 1 LGD 0.0708
57 H13 -1.5286 3.9190 -3.4885 H 1 LGD 0.0161
58 H14 -2.0006 2.2423 -3.2906 H 1 LGD 0.0161
59 H15 0.5361 3.4541 -2.1273 H 1 LGD 0.1015
60 H16 0.8366 4.2644 0.1935 H 1 LGD 0.0725
61 H17 -0.4719 4.1046 1.3549 H 1 LGD 0.0725
62 H18 1.2511 2.3237 1.6226 H 1 LGD 0.0449
63 H19 -0.3240 1.6423 1.2751 H 1 LGD 0.0449
64 H20 2.0363 1.9782 -0.6530 H 1 LGD 0.0732
65 H21 1.3713 0.4765 -0.0319 H 1 LGD 0.0732
66 H22 -2.1827 2.0766 0.3632 H 1 LGD 0.0864
67 H23 -2.7936 3.7019 0.6001 H 1 LGD 0.0864
68 H24 -3.0181 2.2101 -1.9110 H 1 LGD 0.4753
69 H25 -4.9913 2.7436 0.2191 H 1 LGD 0.1337
70 H26 -5.4226 2.3309 -1.4470 H 1 LGD 0.1337
71 H27 -5.4280 0.1745 -0.5864 H 1 LGD 0.1378
72 H28 -3.7214 0.2918 -1.0445 H 1 LGD 0.1378
73 H29 -4.9442 0.4525 1.6063 H 1 LGD 0.4643
74 H30 -4.0074 -1.6256 0.8286 H 1 LGD 0.1090
75 H31 -2.5506 -0.7192 0.4575 H 1 LGD 0.1090
76 H32 -2.0579 0.9632 2.7323 H 1 LGD 0.0119
77 H33 -3.6198 0.7603 3.5155 H 1 LGD 0.0119
78 H34 -1.9001 1.1347 5.1856 H 1 LGD 0.0657
79 H35 -2.5552 -0.4820 5.3967 H 1 LGD 0.0657
80 H36 0.0232 0.2796 3.9272 H 1 LGD 0.0581
81 H37 -0.0880 -0.4287 5.5284 H 1 LGD 0.0581
82 H38 -1.7910 -3.0084 2.5576 H 1 LGD 0.0696
83 H39 1.0326 -2.5367 0.2070 H 1 LGD 0.0599
84 H40 0.2188 -3.7510 1.1901 H 1 LGD 0.0599
85 H41 -0.3550 -0.7434 1.1698 H 1 LGD 0.0236
86 H42 -1.2893 -2.0573 0.4117 H 1 LGD 0.0236
87 H43 1.6783 -1.6829 5.6257 H 1 LGD 0.1320
88 H44 4.0639 -1.8646 5.1662 H 1 LGD 0.1496
89 H45 3.2219 -2.8113 1.0527 H 1 LGD 0.1430
90 H46 5.8719 -2.1987 3.7126 H 1 LGD 0.0621
91 H47 5.4502 -0.2980 2.1448 H 1 LGD 0.0408
92 H48 6.8316 -1.2869 1.6316 H 1 LGD 0.0408
93 H49 5.2714 -1.4413 0.7968 H 1 LGD 0.0408
94 H50 5.4677 -4.5626 3.0010 H 1 LGD 0.0408
95 H51 5.2960 -4.0283 1.3143 H 1 LGD 0.0408
96 H52 6.8477 -3.8340 2.1551 H 1 LGD 0.0408
97 H53 -1.6062 5.6960 -0.1832 H 1 LGD 0.0577
98 H54 -0.4628 5.5881 -1.5319 H 1 LGD 0.0577
99 H55 -2.1792 5.2068 -1.7784 H 1 LGD 0.0577
100 H56 -1.4859 0.5688 -0.4415 H 1 LGD 0.0195
101 H57 -1.7234 0.3876 -2.1862 H 1 LGD 0.0195
102 H58 -0.5758 -0.6313 -1.3354 H 1 LGD 0.0195
103 H59 -0.3212 -2.8528 5.8471 H 1 LGD 0.0478
104 H60 -1.9694 -2.8122 5.2345 H 1 LGD 0.0478
105 H61 -0.7927 -3.9276 4.5256 H 1 LGD 0.0478
106 H62 -4.9291 -1.3336 3.2364 H 1 LGD 0.0561
107 H63 -4.1306 -2.8526 2.8119 H 1 LGD 0.0561
108 H64 -3.7920 -2.0692 4.3616 H 1 LGD 0.0561
109 H65 -3.6107 3.7017 -1.6067 H 1 LGD 0.4643
110 H66 -3.5198 1.2243 1.3412 H 1 LGD 0.4643
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 2 7 1
8 7 8 1
9 7 9 1
10 4 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 5 13 1
15 12 14 1
16 14 15 1
17 15 16 1
18 16 17 1
19 13 17 1
20 14 18 1
21 18 19 1
22 19 20 1
23 20 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 24 25 1
28 25 26 1
29 26 27 1
30 27 28 1
31 28 29 1
32 24 29 1
33 28 30 1
34 30 31 ar
35 31 32 1
36 32 33 1
37 29 33 1
38 30 34 ar
39 34 35 ar
40 35 36 ar
41 36 37 ar
42 31 37 ar
43 36 38 1
44 38 39 1
45 38 40 1
46 14 41 1
47 13 42 1
48 28 43 1
49 24 44 1
50 1 45 1
51 3 46 1
52 6 47 1
53 7 48 1
54 8 49 1
55 8 50 1
56 8 51 1
57 9 52 1
58 9 53 1
59 9 54 1
60 10 55 1
61 10 56 1
62 11 57 1
63 11 58 1
64 12 59 1
65 15 60 1
66 15 61 1
67 16 62 1
68 16 63 1
69 17 64 1
70 17 65 1
71 18 66 1
72 18 67 1
73 19 68 1
74 20 69 1
75 20 70 1
76 21 71 1
77 21 72 1
78 22 73 1
79 23 74 1
80 23 75 1
81 25 76 1
82 25 77 1
83 26 78 1
84 26 79 1
85 27 80 1
86 27 81 1
87 29 82 1
88 32 83 1
89 32 84 1
90 33 85 1
91 33 86 1
92 34 87 1
93 35 88 1
94 37 89 1
95 38 90 1
96 39 91 1
97 39 92 1
98 39 93 1
99 40 94 1
100 40 95 1
101 40 96 1
102 41 97 1
103 41 98 1
104 41 99 1
105 42 100 1
106 42 101 1
107 42 102 1
108 43 103 1
109 43 104 1
110 43 105 1
111 44 106 1
112 44 107 1
113 44 108 1
114 19 109 1
115 22 110 1