@COMMENT
LIGANDBOX_ID = D05820-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05820
NAME = Semduramicin_(USAN/INN)
MOLECULAR_FORMULA = C45H76O16
MOLECULAR_WEIGHT = 873.087
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 16
NUM_OF_CHIRAL_ATOMS = 23
TPSA = 210.5200
HOMO = -4.1619
LUMO = 3.7703
mLOGPA = -5.212
mLOGS = -1.614
mLOGD = 0.690
@MOLECULE
D05820-03
136 142 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.4635 3.2699 -1.9013 C.3 1 LGD 0.3542
2 O1 -1.4735 2.0547 -2.6835 O.3 1 LGD -0.4419
3 O2 -0.1570 3.4800 -1.3037 O.3 1 LGD -0.4170
4 C2 -2.4701 2.9942 -0.7633 C.3 1 LGD -0.0923
5 C3 -1.8563 4.5014 -2.7748 C.3 1 LGD -0.1217
6 C4 -1.9109 0.8987 -1.9202 C.3 1 LGD 0.1609
7 C5 0.9312 4.0326 -2.0976 C.3 1 LGD 0.1741
8 C6 -2.4607 1.4760 -0.5843 C.3 1 LGD -0.0949
9 C7 -1.0127 5.7435 -2.4124 C.3 1 LGD 0.1521
10 C8 -0.7344 -0.1425 -1.7746 C.3 1 LGD 0.1435
11 C9 1.4401 2.9922 -3.1885 C.3 1 LGD -0.0723
12 C10 0.5203 5.4827 -2.5594 C.3 1 LGD -0.0780
13 O3 -1.4110 6.8544 -3.2138 O.3 1 LGD -0.6049
14 O4 -1.2582 -1.3503 -1.1784 O.3 1 LGD -0.4359
15 C11 0.4665 0.2426 -0.8841 C.3 1 LGD -0.0983
16 C12 2.9500 2.6043 -3.0327 C.3 1 LGD 0.1559
17 C13 1.0767 3.2896 -4.6729 C.3 1 LGD -0.0785
18 C14 1.3038 6.5519 -1.7533 C.3 1 LGD -0.0901
19 C15 -0.6110 -1.7172 0.0638 C.3 1 LGD 0.1514
20 C16 0.2961 -0.5224 0.4226 C.3 1 LGD -0.0966
21 C17 3.9824 3.7703 -3.0796 C.3 1 LGD 0.0863
22 C18 -1.7505 -1.9770 1.1013 C.3 1 LGD 0.1249
23 C19 0.2651 -2.9714 -0.2279 C.3 1 LGD -0.0849
24 C20 5.4172 3.2408 -2.7716 C.3 1 LGD 0.1213
25 O5 3.9722 4.3355 -4.4102 O.3 1 LGD -0.4425
26 O6 -2.4026 -3.1946 0.6997 O.3 1 LGD -0.4005
27 O7 6.3441 4.3228 -2.6928 O.3 1 LGD -0.6021
28 C21 -2.7681 -3.9917 1.8329 C.3 1 LGD 0.1512
29 C22 -1.6507 -3.6884 2.8494 C.3 1 LGD -0.1097
30 C23 -2.8322 -5.4934 1.4205 C.3 1 LGD 0.1830
31 O8 -1.5896 -5.8356 0.7553 O.3 1 LGD -0.4532
32 C24 -4.0294 -5.8887 0.4934 C.3 1 LGD -0.0783
33 C25 -1.3413 -7.2310 0.4736 C.3 1 LGD 0.3618
34 C26 -3.8889 -7.3744 0.0430 C.3 1 LGD -0.0679
35 C27 -4.2645 -4.9359 -0.7140 C.3 1 LGD -0.0764
36 C28 -2.4676 -7.7591 -0.4802 C.3 1 LGD -0.0858
37 C29 -1.2412 -8.0245 1.8072 C.3 1 LGD -0.1132
38 O9 -0.0718 -7.3071 -0.1647 O.3 1 LGD -0.5926
39 C30 -2.2569 -7.3241 -1.9610 C.3 1 LGD -0.0800
40 O10 -2.0328 -1.4081 3.4812 O.3 1 LGD -0.4677
41 C31 -3.0670 0.2824 -2.7537 C.3 1 LGD -0.0862
42 C32 -1.2739 -2.2298 2.5616 C.3 1 LGD 0.1266
43 O11 3.0854 1.9441 -1.7530 O.3 1 LGD -0.4242
44 C33 4.3449 1.2960 -1.4697 C.3 1 LGD 0.3625
45 C34 5.4569 2.4024 -1.4571 C.3 1 LGD -0.0462
46 C35 6.8766 1.8132 -1.2036 C.3 1 LGD -0.0727
47 C36 4.1794 5.7572 -4.5057 C.3 1 LGD 0.1250
48 C37 4.1812 0.5528 -0.1113 C.3 1 LGD -0.2322
49 C38 3.8601 1.4836 1.0644 C.2 1 LGD 0.9372
50 O12 2.6929 1.7851 1.2406 O.co2 1 LGD -0.8291
51 O13 4.7931 1.8317 1.7667 O.co2 1 LGD -0.8291
52 O14 4.6068 0.3203 -2.4799 O.3 1 LGD -0.6424
53 C39 -1.7454 0.0054 3.4871 C.3 1 LGD 0.3400
54 C40 -2.7957 0.7443 4.3511 C.3 1 LGD -0.0899
55 C41 -2.5979 0.5013 5.8652 C.3 1 LGD -0.0642
56 C42 -1.1410 0.7894 6.3006 C.3 1 LGD 0.1246
57 C43 -0.1141 0.0284 5.4061 C.3 1 LGD 0.1375
58 O15 -0.4115 0.2662 4.0017 O.3 1 LGD -0.4084
59 C44 -0.0266 -1.4887 5.7136 C.3 1 LGD -0.1161
60 O16 -0.9306 2.2153 6.1844 O.3 1 LGD -0.4213
61 C45 0.1930 2.7488 6.9094 C.3 1 LGD 0.1251
62 H1 -2.1860 3.5064 0.1651 H 1 LGD 0.0557
63 H2 -3.4815 3.3218 -1.0347 H 1 LGD 0.0557
64 H3 -1.7369 4.2666 -3.8379 H 1 LGD 0.0517
65 H4 -2.9186 4.7415 -2.6420 H 1 LGD 0.0517
66 H5 1.7660 4.1547 -1.3970 H 1 LGD 0.1098
67 H6 -3.4680 1.1033 -0.3568 H 1 LGD 0.0549
68 H7 -1.8266 1.2185 0.2666 H 1 LGD 0.0549
69 H8 -1.2191 5.9737 -1.3586 H 1 LGD 0.0372
70 H9 -0.3595 -0.3725 -2.7801 H 1 LGD 0.0565
71 H10 0.9299 2.0481 -2.9816 H 1 LGD 0.0809
72 H11 0.7880 5.6318 -3.6091 H 1 LGD 0.0615
73 H12 -2.3460 7.0340 -3.0131 H 1 LGD 0.3951
74 H13 1.3873 -0.0802 -1.3832 H 1 LGD 0.0863
75 H14 0.5500 1.3107 -0.6875 H 1 LGD 0.0863
76 H15 3.1930 1.8943 -3.8335 H 1 LGD 0.0460
77 H16 1.5418 4.2068 -5.0489 H 1 LGD 0.0314
78 H17 1.4147 2.4679 -5.3167 H 1 LGD 0.0314
79 H18 -0.0051 3.3738 -4.8103 H 1 LGD 0.0314
80 H19 1.0683 6.4859 -0.6832 H 1 LGD 0.0369
81 H20 2.3857 6.4187 -1.8697 H 1 LGD 0.0369
82 H21 1.0533 7.5638 -2.0961 H 1 LGD 0.0369
83 H22 1.2661 -0.8450 0.8220 H 1 LGD 0.0729
84 H23 -0.1567 0.1234 1.1794 H 1 LGD 0.0729
85 H24 3.7073 4.5275 -2.3355 H 1 LGD 0.0636
86 H25 -2.4716 -1.1507 1.0768 H 1 LGD 0.0615
87 H26 1.0871 -2.7246 -0.9120 H 1 LGD 0.0382
88 H27 0.7062 -3.3663 0.6959 H 1 LGD 0.0382
89 H28 -0.3222 -3.7715 -0.6951 H 1 LGD 0.0382
90 H29 5.7125 2.5808 -3.5976 H 1 LGD 0.0408
91 H30 6.3598 4.7434 -3.5701 H 1 LGD 0.3922
92 H31 -3.7332 -3.6543 2.2324 H 1 LGD 0.0521
93 H32 -0.7778 -4.3336 2.6889 H 1 LGD 0.0646
94 H33 -1.9954 -3.8326 3.8815 H 1 LGD 0.0646
95 H34 -2.9247 -6.0678 2.3496 H 1 LGD 0.0322
96 H35 -4.9400 -5.8320 1.1036 H 1 LGD 0.0345
97 H36 -4.1244 -8.0139 0.9031 H 1 LGD 0.0344
98 H37 -4.6484 -7.6157 -0.7118 H 1 LGD 0.0344
99 H38 -4.9684 -5.3742 -1.4323 H 1 LGD 0.0407
100 H39 -4.6958 -3.9849 -0.3773 H 1 LGD 0.0407
101 H40 -3.3333 -4.7101 -1.2452 H 1 LGD 0.0407
102 H41 -2.4200 -8.8560 -0.4759 H 1 LGD 0.0444
103 H42 -2.2163 -8.1423 2.2938 H 1 LGD 0.0438
104 H43 -0.8476 -9.0328 1.6260 H 1 LGD 0.0438
105 H44 -0.5685 -7.5183 2.5115 H 1 LGD 0.0438
106 H45 0.1406 -6.3991 -0.4417 H 1 LGD 0.4322
107 H46 -1.9791 -6.2669 -2.0397 H 1 LGD 0.0376
108 H47 -1.4510 -7.9094 -2.4217 H 1 LGD 0.0376
109 H48 -3.1623 -7.4893 -2.5581 H 1 LGD 0.0376
110 H49 -3.5436 -0.5500 -2.2203 H 1 LGD 0.0365
111 H50 -3.8399 1.0322 -2.9660 H 1 LGD 0.0365
112 H51 -2.6942 -0.0997 -3.7127 H 1 LGD 0.0365
113 H52 -0.1959 -2.0699 2.6895 H 1 LGD 0.0851
114 H53 5.2351 3.0918 -0.6325 H 1 LGD 0.1045
115 H54 7.6326 2.6067 -1.1618 H 1 LGD 0.0359
116 H55 6.9229 1.2793 -0.2472 H 1 LGD 0.0359
117 H56 7.1650 1.1153 -1.9997 H 1 LGD 0.0359
118 H57 3.3904 6.2934 -3.9653 H 1 LGD 0.0263
119 H58 5.1524 6.0451 -4.0923 H 1 LGD 0.0263
120 H59 4.1473 6.0650 -5.5579 H 1 LGD 0.0263
121 H60 3.3791 -0.1903 -0.1909 H 1 LGD 0.0342
122 H61 5.0887 -0.0167 0.1247 H 1 LGD 0.0342
123 H62 3.8090 -0.2325 -2.5422 H 1 LGD 0.4039
124 H63 -1.8180 0.3896 2.4650 H 1 LGD 0.0830
125 H64 -2.7306 1.8201 4.1434 H 1 LGD 0.0569
126 H65 -3.8045 0.4306 4.0543 H 1 LGD 0.0569
127 H66 -3.2881 1.1358 6.4357 H 1 LGD 0.0457
128 H67 -2.8575 -0.5370 6.1068 H 1 LGD 0.0457
129 H68 -1.0182 0.4847 7.3481 H 1 LGD 0.0310
130 H69 0.8855 0.4308 5.6063 H 1 LGD 0.0868
131 H70 -1.0111 -1.9695 5.7278 H 1 LGD 0.0386
132 H71 0.6030 -1.9988 4.9743 H 1 LGD 0.0386
133 H72 0.4271 -1.6447 6.7003 H 1 LGD 0.0386
134 H73 0.1154 2.4954 7.9743 H 1 LGD 0.0310
135 H74 1.1370 2.3536 6.5157 H 1 LGD 0.0310
136 H75 0.2107 3.8413 6.8126 H 1 LGD 0.0310
@BOND
1 10 14 1
2 10 15 1
3 11 16 1
4 11 17 1
5 12 18 1
6 14 19 1
7 15 20 1
8 16 21 1
9 19 22 1
10 19 23 1
11 21 24 1
12 21 25 1
13 22 26 1
14 22 42 1
15 24 27 1
16 26 28 1
17 29 42 1
18 28 30 1
19 30 31 1
20 30 32 1
21 31 33 1
22 32 34 1
23 32 35 1
24 33 36 1
25 33 37 1
26 33 38 1
27 36 39 1
28 6 8 1
29 9 12 1
30 19 20 1
31 28 29 1
32 34 36 1
33 1 2 1
34 1 3 1
35 1 4 1
36 1 5 1
37 2 6 1
38 40 42 1
39 3 7 1
40 4 8 1
41 5 9 1
42 6 41 1
43 6 10 1
44 7 11 1
45 7 12 1
46 9 13 1
47 16 43 1
48 43 44 1
49 44 45 1
50 24 45 1
51 45 46 1
52 25 47 1
53 44 48 1
54 48 49 1
55 49 50 1
56 49 51 2
57 44 52 1
58 40 53 1
59 53 54 1
60 54 55 1
61 55 56 1
62 56 57 1
63 57 58 1
64 53 58 1
65 57 59 1
66 56 60 1
67 60 61 1
68 4 62 1
69 4 63 1
70 5 64 1
71 5 65 1
72 7 66 1
73 8 67 1
74 8 68 1
75 9 69 1
76 10 70 1
77 11 71 1
78 12 72 1
79 13 73 1
80 15 74 1
81 15 75 1
82 16 76 1
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84 17 78 1
85 17 79 1
86 18 80 1
87 18 81 1
88 18 82 1
89 20 83 1
90 20 84 1
91 21 85 1
92 22 86 1
93 23 87 1
94 23 88 1
95 23 89 1
96 24 90 1
97 27 91 1
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100 29 94 1
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102 32 96 1
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104 34 98 1
105 35 99 1
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142 61 136 1