@COMMENT
LIGANDBOX_ID = D05820-07
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05820
NAME = Semduramicin_(USAN/INN)
MOLECULAR_FORMULA = C45H76O16
MOLECULAR_WEIGHT = 873.087
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 16
NUM_OF_CHIRAL_ATOMS = 23
TPSA = 210.5200
HOMO = -4.1619
LUMO = 3.7703
mLOGPA = -5.212
mLOGS = -1.614
mLOGD = 0.690
@MOLECULE
D05820-07
136 142 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.3321 3.2585 -1.1572 C.3 1 LGD 0.3456
2 O1 1.0920 2.0401 -1.1880 O.3 1 LGD -0.4478
3 O2 -1.0307 3.0595 -1.6358 O.3 1 LGD -0.3915
4 C2 1.0660 4.1554 -2.1755 C.3 1 LGD -0.0872
5 C3 0.3292 3.8247 0.2871 C.3 1 LGD -0.1224
6 C4 1.6088 1.7728 -2.5087 C.3 1 LGD 0.1532
7 C5 -2.0755 2.6053 -0.7272 C.3 1 LGD 0.1746
8 C6 1.6924 3.1759 -3.1801 C.3 1 LGD -0.1023
9 C7 -0.9691 4.5871 0.5777 C.3 1 LGD 0.1473
10 C8 3.0150 1.0903 -2.3747 C.3 1 LGD 0.1530
11 C9 -1.9094 1.0526 -0.4154 C.3 1 LGD -0.0714
12 C10 -2.1966 3.6368 0.4716 C.3 1 LGD -0.0765
13 O3 -0.9041 5.1773 1.8758 O.3 1 LGD -0.6085
14 O4 2.8867 -0.2073 -1.7510 O.3 1 LGD -0.4018
15 C11 4.0346 1.8349 -1.4865 C.3 1 LGD -0.1009
16 C12 -2.8126 0.1332 -1.3084 C.3 1 LGD 0.1623
17 C13 -2.0190 0.6299 1.0711 C.3 1 LGD -0.0876
18 C14 -3.4882 4.4855 0.3456 C.3 1 LGD -0.0878
19 C15 3.2969 -0.2166 -0.3588 C.3 1 LGD 0.1723
20 C16 3.8904 1.1952 -0.1051 C.3 1 LGD -0.0966
21 C17 -4.3216 0.0258 -0.9079 C.3 1 LGD 0.0836
22 C18 2.0485 -0.5464 0.5354 C.3 1 LGD 0.1176
23 C19 4.4137 -1.2974 -0.2633 C.3 1 LGD -0.0915
24 C20 -5.0922 -0.8503 -1.9448 C.3 1 LGD 0.1248
25 O5 -4.9140 1.3434 -0.8499 O.3 1 LGD -0.3923
26 O6 1.5019 -1.7925 0.0565 O.3 1 LGD -0.3825
27 O7 -6.4885 -0.8937 -1.6470 O.3 1 LGD -0.5984
28 C21 0.9423 -2.5303 1.1509 C.3 1 LGD 0.1484
29 C22 1.9631 -2.2751 2.2692 C.3 1 LGD -0.1124
30 C23 0.7913 -4.0353 0.7832 C.3 1 LGD 0.1837
31 O8 2.0194 -4.4930 0.1627 O.3 1 LGD -0.4552
32 C24 -0.4051 -4.3629 -0.1627 C.3 1 LGD -0.0807
33 C25 2.1620 -5.9159 -0.0592 C.3 1 LGD 0.3612
34 C26 -0.3863 -5.8745 -0.5375 C.3 1 LGD -0.0676
35 C27 -0.5000 -3.4447 -1.4130 C.3 1 LGD -0.0830
36 C28 1.0071 -6.4061 -1.0035 C.3 1 LGD -0.0851
37 C29 2.1881 -6.6566 1.3079 C.3 1 LGD -0.1128
38 O9 3.4283 -6.1159 -0.6764 O.3 1 LGD -0.5952
39 C30 1.2724 -6.0919 -2.5055 C.3 1 LGD -0.0801
40 O10 1.5274 -0.0117 2.9024 O.3 1 LGD -0.4563
41 C31 0.6097 0.8499 -3.2602 C.3 1 LGD -0.1073
42 C32 2.3711 -0.8139 2.0414 C.3 1 LGD 0.1181
43 O11 -2.7140 0.5757 -2.6809 O.3 1 LGD -0.4034
44 C33 -3.3016 -0.2753 -3.6915 C.3 1 LGD 0.3608
45 C34 -4.8449 -0.3564 -3.4063 C.3 1 LGD -0.0480
46 C35 -5.6047 -1.2367 -4.4418 C.3 1 LGD -0.0714
47 C36 -5.8504 1.5633 0.2231 C.3 1 LGD 0.1229
48 C37 -2.9308 0.3443 -5.0693 C.3 1 LGD -0.2296
49 C38 -3.4366 1.7792 -5.2540 C.2 1 LGD 0.9417
50 O12 -2.6967 2.6824 -4.9047 O.co2 1 LGD -0.8312
51 O13 -4.5272 1.9215 -5.7789 O.co2 1 LGD -0.8312
52 O14 -2.7064 -1.5727 -3.6205 O.3 1 LGD -0.6513
53 C39 1.8512 1.3873 3.0131 C.3 1 LGD 0.3382
54 C40 0.7724 2.1106 3.8597 C.3 1 LGD -0.0916
55 C41 0.8805 1.7884 5.3668 C.3 1 LGD -0.0656
56 C42 2.3164 2.0226 5.8898 C.3 1 LGD 0.1243
57 C43 3.3683 1.2665 5.0217 C.3 1 LGD 0.1386
58 O15 3.1613 1.5782 3.6150 O.3 1 LGD -0.4467
59 C44 3.3890 -0.2648 5.2649 C.3 1 LGD -0.1166
60 O16 2.5651 3.4460 5.8337 O.3 1 LGD -0.4189
61 C45 3.6701 3.9272 6.6199 C.3 1 LGD 0.1259
62 H1 0.3783 4.8522 -2.6721 H 1 LGD 0.0559
63 H2 1.8553 4.7446 -1.6917 H 1 LGD 0.0559
64 H3 0.4179 2.9972 0.9990 H 1 LGD 0.0478
65 H4 1.1953 4.4785 0.4502 H 1 LGD 0.0478
66 H5 -3.0109 2.6995 -1.2884 H 1 LGD 0.1312
67 H6 2.7231 3.4670 -3.4184 H 1 LGD 0.0559
68 H7 1.1289 3.1952 -4.1222 H 1 LGD 0.0559
69 H8 -1.0699 5.3796 -0.1757 H 1 LGD 0.0445
70 H9 3.4345 0.9720 -3.3817 H 1 LGD 0.0676
71 H10 -0.8919 0.7703 -0.6940 H 1 LGD 0.0774
72 H11 -2.2714 3.1069 1.4251 H 1 LGD 0.0491
73 H12 -0.2252 5.8735 1.8437 H 1 LGD 0.3965
74 H13 5.0488 1.6685 -1.8715 H 1 LGD 0.0461
75 H14 3.8620 2.9172 -1.4435 H 1 LGD 0.0461
76 H15 -2.3966 -0.8773 -1.2280 H 1 LGD 0.0349
77 H16 -2.9779 0.9289 1.5112 H 1 LGD 0.0272
78 H17 -1.9264 -0.4592 1.1702 H 1 LGD 0.0272
79 H18 -1.2066 1.0757 1.6536 H 1 LGD 0.0272
80 H19 -3.5466 4.9710 -0.6369 H 1 LGD 0.0376
81 H20 -4.3769 3.8598 0.4721 H 1 LGD 0.0376
82 H21 -3.5265 5.2672 1.1147 H 1 LGD 0.0376
83 H22 4.8549 1.1567 0.4176 H 1 LGD 0.0516
84 H23 3.2147 1.8061 0.5000 H 1 LGD 0.0516
85 H24 -4.3831 -0.4574 0.0757 H 1 LGD 0.0204
86 H25 1.2899 0.2395 0.4534 H 1 LGD 0.0891
87 H26 5.2114 -1.0930 -0.9890 H 1 LGD 0.0389
88 H27 4.8727 -1.3194 0.7323 H 1 LGD 0.0389
89 H28 4.0188 -2.2985 -0.4770 H 1 LGD 0.0389
90 H29 -4.6946 -1.8699 -1.8645 H 1 LGD 0.0388
91 H30 -6.5903 -0.6508 -0.7108 H 1 LGD 0.3862
92 H31 -0.0285 -2.1039 1.4352 H 1 LGD 0.0586
93 H32 2.8379 -2.9293 2.1616 H 1 LGD 0.0623
94 H33 1.5273 -2.4393 3.2632 H 1 LGD 0.0623
95 H34 0.6286 -4.5718 1.7252 H 1 LGD 0.0305
96 H35 -1.3261 -4.1932 0.4102 H 1 LGD 0.0394
97 H36 -0.6939 -6.4469 0.3470 H 1 LGD 0.0378
98 H37 -1.1490 -6.0859 -1.2981 H 1 LGD 0.0378
99 H38 -1.2366 -3.8285 -2.1298 H 1 LGD 0.0476
100 H39 -0.8186 -2.4370 -1.1240 H 1 LGD 0.0476
101 H40 0.4631 -3.3493 -1.9256 H 1 LGD 0.0476
102 H41 0.9613 -7.5007 -0.9290 H 1 LGD 0.0431
103 H42 1.2003 -6.6849 1.7822 H 1 LGD 0.0425
104 H43 2.5116 -7.6970 1.1756 H 1 LGD 0.0425
105 H44 2.8856 -6.1694 2.0013 H 1 LGD 0.0425
106 H45 3.7058 -5.2418 -1.0008 H 1 LGD 0.4294
107 H46 1.6353 -5.0684 -2.6507 H 1 LGD 0.0388
108 H47 2.0336 -6.7707 -2.9105 H 1 LGD 0.0388
109 H48 0.3643 -6.2256 -3.1067 H 1 LGD 0.0388
110 H49 0.3607 -0.0354 -2.6617 H 1 LGD 0.0603
111 H50 -0.3219 1.3779 -3.4928 H 1 LGD 0.0603
112 H51 1.0396 0.5068 -4.2095 H 1 LGD 0.0603
113 H52 3.4290 -0.6593 2.2836 H 1 LGD 0.0644
114 H53 -5.2543 0.6593 -3.4815 H 1 LGD 0.1141
115 H54 -6.6843 -1.2298 -4.2469 H 1 LGD 0.0340
116 H55 -5.4668 -0.8627 -5.4630 H 1 LGD 0.0340
117 H56 -5.2612 -2.2780 -4.4065 H 1 LGD 0.0340
118 H57 -6.6578 0.8229 0.2052 H 1 LGD 0.0221
119 H58 -5.3366 1.5020 1.1906 H 1 LGD 0.0221
120 H59 -6.2960 2.5610 0.1287 H 1 LGD 0.0221
121 H60 -1.8390 0.3501 -5.1833 H 1 LGD 0.0339
122 H61 -3.3145 -0.2773 -5.8878 H 1 LGD 0.0339
123 H62 -1.7447 -1.4372 -3.6707 H 1 LGD 0.4067
124 H63 1.8516 1.8249 2.0130 H 1 LGD 0.0894
125 H64 0.8714 3.1932 3.7092 H 1 LGD 0.0694
126 H65 -0.2283 1.8416 3.5050 H 1 LGD 0.0694
127 H66 0.1732 2.4103 5.9303 H 1 LGD 0.0528
128 H67 0.5863 0.7460 5.5415 H 1 LGD 0.0528
129 H68 2.3757 1.6787 6.9307 H 1 LGD 0.0352
130 H69 4.3664 1.6247 5.2985 H 1 LGD 0.0641
131 H70 2.3950 -0.7167 5.1741 H 1 LGD 0.0415
132 H71 4.0664 -0.7610 4.5592 H 1 LGD 0.0415
133 H72 3.7527 -0.4778 6.2778 H 1 LGD 0.0415
134 H73 3.5526 3.6261 7.6685 H 1 LGD 0.0270
135 H74 4.6207 3.5360 6.2388 H 1 LGD 0.0270
136 H75 3.7060 5.0226 6.5743 H 1 LGD 0.0270
@BOND
1 10 14 1
2 10 15 1
3 11 16 1
4 11 17 1
5 12 18 1
6 14 19 1
7 15 20 1
8 16 21 1
9 19 22 1
10 19 23 1
11 21 24 1
12 21 25 1
13 22 26 1
14 22 42 1
15 24 27 1
16 26 28 1
17 29 42 1
18 28 30 1
19 30 31 1
20 30 32 1
21 31 33 1
22 32 34 1
23 32 35 1
24 33 36 1
25 33 37 1
26 33 38 1
27 36 39 1
28 6 8 1
29 9 12 1
30 19 20 1
31 28 29 1
32 34 36 1
33 1 2 1
34 1 3 1
35 1 4 1
36 1 5 1
37 2 6 1
38 40 42 1
39 3 7 1
40 4 8 1
41 5 9 1
42 6 41 1
43 6 10 1
44 7 11 1
45 7 12 1
46 9 13 1
47 16 43 1
48 43 44 1
49 44 45 1
50 24 45 1
51 45 46 1
52 25 47 1
53 44 48 1
54 48 49 1
55 49 50 1
56 49 51 2
57 44 52 1
58 40 53 1
59 53 54 1
60 54 55 1
61 55 56 1
62 56 57 1
63 57 58 1
64 53 58 1
65 57 59 1
66 56 60 1
67 60 61 1
68 4 62 1
69 4 63 1
70 5 64 1
71 5 65 1
72 7 66 1
73 8 67 1
74 8 68 1
75 9 69 1
76 10 70 1
77 11 71 1
78 12 72 1
79 13 73 1
80 15 74 1
81 15 75 1
82 16 76 1
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84 17 78 1
85 17 79 1
86 18 80 1
87 18 81 1
88 18 82 1
89 20 83 1
90 20 84 1
91 21 85 1
92 22 86 1
93 23 87 1
94 23 88 1
95 23 89 1
96 24 90 1
97 27 91 1
98 28 92 1
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100 29 94 1
101 30 95 1
102 32 96 1
103 34 97 1
104 34 98 1
105 35 99 1
106 35 100 1
107 35 101 1
108 36 102 1
109 37 103 1
110 37 104 1
111 37 105 1
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113 39 107 1
114 39 108 1
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142 61 136 1