@COMMENT
LIGANDBOX_ID = D05820-11
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05820
NAME = Semduramicin_(USAN/INN)
MOLECULAR_FORMULA = C45H76O16
MOLECULAR_WEIGHT = 873.087
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 16
NUM_OF_CHIRAL_ATOMS = 23
TPSA = 210.5200
HOMO = -4.1619
LUMO = 3.7703
mLOGPA = -5.212
mLOGS = -1.614
mLOGD = 0.690
@MOLECULE
D05820-11
136 142 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.2315 3.3360 -1.1980 C.3 1 LGD 0.3479
2 O1 1.0322 2.1404 -1.2241 O.3 1 LGD -0.4449
3 O2 -1.1195 3.0971 -1.6916 O.3 1 LGD -0.3930
4 C2 0.9438 4.2589 -2.2094 C.3 1 LGD -0.0875
5 C3 0.1919 3.9021 0.2486 C.3 1 LGD -0.1219
6 C4 1.5708 1.8952 -2.5430 C.3 1 LGD 0.1528
7 C5 -2.1477 2.5963 -0.7911 C.3 1 LGD 0.1776
8 C6 1.6316 3.3058 -3.1997 C.3 1 LGD -0.1022
9 C7 -1.1300 4.6358 0.5190 C.3 1 LGD 0.1515
10 C8 2.9881 1.2384 -2.4038 C.3 1 LGD 0.1537
11 C9 -1.9114 1.0391 -0.5342 C.3 1 LGD -0.0785
12 C10 -2.3588 3.6785 0.3539 C.3 1 LGD -0.0731
13 O3 -1.0910 5.2639 1.8009 O.3 1 LGD -0.6046
14 O4 2.8775 -0.0715 -1.8021 O.3 1 LGD -0.4013
15 C11 3.9871 1.9907 -1.4994 C.3 1 LGD -0.1010
16 C12 -2.9008 0.1387 -1.3501 C.3 1 LGD 0.1635
17 C13 -1.6883 0.5247 0.9085 C.3 1 LGD -0.0747
18 C14 -2.9607 3.1889 1.6991 C.3 1 LGD -0.0724
19 C15 3.3014 -0.1042 -0.4154 C.3 1 LGD 0.1716
20 C16 3.8727 1.3115 -0.1349 C.3 1 LGD -0.0970
21 C17 -4.4169 0.2735 -0.9995 C.3 1 LGD 0.0866
22 C18 2.0682 -0.4684 0.4847 C.3 1 LGD 0.1164
23 C19 4.4343 -1.1702 -0.3518 C.3 1 LGD -0.0914
24 C20 -5.2941 -0.5109 -2.0284 C.3 1 LGD 0.1186
25 O5 -4.6179 -0.2820 0.3220 O.3 1 LGD -0.4446
26 O6 1.5361 -1.7197 0.0026 O.3 1 LGD -0.3820
27 O7 -6.6810 -0.2656 -1.7984 O.3 1 LGD -0.6030
28 C21 1.0119 -2.4755 1.1034 C.3 1 LGD 0.1467
29 C22 2.0575 -2.2213 2.1966 C.3 1 LGD -0.1119
30 C23 0.8447 -3.9734 0.7233 C.3 1 LGD 0.1841
31 O8 2.0588 -4.4368 0.0820 O.3 1 LGD -0.4557
32 C24 -0.3711 -4.2799 -0.2067 C.3 1 LGD -0.0804
33 C25 2.1813 -5.8597 -0.1505 C.3 1 LGD 0.3611
34 C26 -0.3725 -5.7877 -0.5968 C.3 1 LGD -0.0680
35 C27 -0.4831 -3.3476 -1.4463 C.3 1 LGD -0.0830
36 C28 1.0098 -6.3286 -1.0849 C.3 1 LGD -0.0841
37 C29 2.2135 -6.6100 1.2117 C.3 1 LGD -0.1138
38 O9 3.4381 -6.0707 -0.7830 O.3 1 LGD -0.5960
39 C30 1.2596 -6.0000 -2.5863 C.3 1 LGD -0.0797
40 O10 1.5536 0.0196 2.8613 O.3 1 LGD -0.4551
41 C31 0.6062 0.9589 -3.3245 C.3 1 LGD -0.1089
42 C32 2.4155 -0.7443 1.9838 C.3 1 LGD 0.1178
43 O11 -2.7209 0.5074 -2.7358 O.3 1 LGD -0.4184
44 C33 -3.3879 -0.2799 -3.7401 C.3 1 LGD 0.3625
45 C34 -4.9307 -0.1431 -3.4997 C.3 1 LGD -0.0464
46 C35 -5.7668 -0.9728 -4.5190 C.3 1 LGD -0.0720
47 C36 -5.7153 0.2433 1.0944 C.3 1 LGD 0.1297
48 C37 -2.9080 0.2646 -5.1173 C.3 1 LGD -0.2318
49 C38 -3.2924 1.7292 -5.3657 C.2 1 LGD 0.9378
50 O12 -2.5397 2.5876 -4.9395 O.co2 1 LGD -0.8305
51 O13 -4.3084 1.9362 -6.0062 O.co2 1 LGD -0.8305
52 O14 -2.9686 -1.6401 -3.6234 O.3 1 LGD -0.6459
53 C39 1.8187 1.4310 2.9680 C.3 1 LGD 0.3383
54 C40 0.7271 2.1056 3.8382 C.3 1 LGD -0.0922
55 C41 0.8896 1.8094 5.3463 C.3 1 LGD -0.0653
56 C42 2.3297 2.0993 5.8301 C.3 1 LGD 0.1242
57 C43 3.3841 1.3732 4.9412 C.3 1 LGD 0.1386
58 O15 3.1334 1.6752 3.5396 O.3 1 LGD -0.4467
59 C44 3.4581 -0.1560 5.1894 C.3 1 LGD -0.1167
60 O16 2.5287 3.5297 5.7569 O.3 1 LGD -0.4187
61 C45 3.6386 4.0527 6.5097 C.3 1 LGD 0.1259
62 H1 0.2332 4.9199 -2.7229 H 1 LGD 0.0558
63 H2 1.6956 4.8880 -1.7167 H 1 LGD 0.0558
64 H3 0.2983 3.0824 0.9668 H 1 LGD 0.0493
65 H4 1.0374 4.5804 0.4191 H 1 LGD 0.0493
66 H5 -3.0827 2.6472 -1.3605 H 1 LGD 0.0981
67 H6 2.6599 3.6304 -3.4021 H 1 LGD 0.0558
68 H7 1.0992 3.3152 -4.1601 H 1 LGD 0.0558
69 H8 -1.2213 5.4180 -0.2464 H 1 LGD 0.0375
70 H9 3.4183 1.1421 -3.4087 H 1 LGD 0.0668
71 H10 -0.9536 0.8016 -0.9996 H 1 LGD 0.0836
72 H11 -3.1464 4.3304 -0.0465 H 1 LGD 0.0470
73 H12 -0.4188 5.9661 1.7576 H 1 LGD 0.3971
74 H13 5.0041 1.8693 -1.8937 H 1 LGD 0.0457
75 H14 3.7784 3.0650 -1.4260 H 1 LGD 0.0457
76 H15 -2.6049 -0.9082 -1.2100 H 1 LGD 0.0462
77 H16 -2.5847 0.5781 1.5319 H 1 LGD 0.0295
78 H17 -1.3942 -0.5298 0.8790 H 1 LGD 0.0295
79 H18 -0.8754 1.0732 1.3942 H 1 LGD 0.0295
80 H19 -2.1991 2.7410 2.3475 H 1 LGD 0.0319
81 H20 -3.3987 4.0293 2.2523 H 1 LGD 0.0319
82 H21 -3.7678 2.4691 1.5298 H 1 LGD 0.0319
83 H22 4.8449 1.2768 0.3736 H 1 LGD 0.0515
84 H23 3.1950 1.8942 0.4953 H 1 LGD 0.0515
85 H24 -4.7016 1.3326 -1.0142 H 1 LGD 0.0611
86 H25 1.2970 0.3064 0.4155 H 1 LGD 0.0903
87 H26 5.2233 -0.9390 -1.0789 H 1 LGD 0.0387
88 H27 4.9009 -1.2073 0.6399 H 1 LGD 0.0387
89 H28 4.0516 -2.1721 -0.5838 H 1 LGD 0.0387
90 H29 -5.0946 -1.5816 -1.8911 H 1 LGD 0.0405
91 H30 -6.8894 -0.6279 -0.9199 H 1 LGD 0.3901
92 H31 0.0494 -2.0618 1.4252 H 1 LGD 0.0620
93 H32 2.9449 -2.8501 2.0481 H 1 LGD 0.0623
94 H33 1.6555 -2.4157 3.1993 H 1 LGD 0.0623
95 H34 0.6905 -4.5161 1.6631 H 1 LGD 0.0308
96 H35 -1.2805 -4.1088 0.3839 H 1 LGD 0.0438
97 H36 -0.6757 -6.3658 0.2855 H 1 LGD 0.0377
98 H37 -1.1464 -5.9837 -1.3502 H 1 LGD 0.0377
99 H38 -1.2275 -3.7256 -2.1582 H 1 LGD 0.0471
100 H39 -0.8016 -2.3427 -1.1447 H 1 LGD 0.0471
101 H40 0.4734 -3.2465 -1.9703 H 1 LGD 0.0471
102 H41 0.9538 -7.4234 -1.0213 H 1 LGD 0.0425
103 H42 1.2290 -6.6358 1.6934 H 1 LGD 0.0423
104 H43 2.5296 -7.6514 1.0704 H 1 LGD 0.0423
105 H44 2.9186 -6.1314 1.9034 H 1 LGD 0.0423
106 H45 3.7384 -5.1923 -1.0736 H 1 LGD 0.4291
107 H46 1.6234 -4.9758 -2.7246 H 1 LGD 0.0385
108 H47 2.0144 -6.6767 -3.0065 H 1 LGD 0.0385
109 H48 0.3445 -6.1252 -3.1786 H 1 LGD 0.0385
110 H49 0.3993 0.0401 -2.7616 H 1 LGD 0.0621
111 H50 -0.3485 1.4535 -3.5350 H 1 LGD 0.0621
112 H51 1.0454 0.6699 -4.2874 H 1 LGD 0.0621
113 H52 3.4700 -0.5570 2.2175 H 1 LGD 0.0635
114 H53 -5.2001 0.9119 -3.6380 H 1 LGD 0.1046
115 H54 -6.8422 -0.8210 -4.3649 H 1 LGD 0.0357
116 H55 -5.5489 -0.6741 -5.5511 H 1 LGD 0.0357
117 H56 -5.5603 -2.0460 -4.4219 H 1 LGD 0.0357
118 H57 -5.6800 1.3392 1.1183 H 1 LGD 0.0239
119 H58 -6.6789 -0.0716 0.6798 H 1 LGD 0.0239
120 H59 -5.6514 -0.1287 2.1242 H 1 LGD 0.0239
121 H60 -1.8152 0.1829 -5.1822 H 1 LGD 0.0361
122 H61 -3.3073 -0.3507 -5.9333 H 1 LGD 0.0361
123 H62 -1.9963 -1.6297 -3.6446 H 1 LGD 0.4076
124 H63 1.7755 1.8704 1.9687 H 1 LGD 0.0898
125 H64 0.7631 3.1900 3.6731 H 1 LGD 0.0694
126 H65 -0.2658 1.7758 3.5119 H 1 LGD 0.0694
127 H66 0.1760 2.4138 5.9209 H 1 LGD 0.0527
128 H67 0.6367 0.7600 5.5427 H 1 LGD 0.0527
129 H68 2.4280 1.7665 6.8716 H 1 LGD 0.0349
130 H69 4.3768 1.7630 5.1935 H 1 LGD 0.0638
131 H70 2.4776 -0.6400 5.1194 H 1 LGD 0.0416
132 H71 4.1376 -0.6338 4.4732 H 1 LGD 0.0416
133 H72 3.8471 -0.3531 6.1960 H 1 LGD 0.0416
134 H73 3.5564 3.7605 7.5642 H 1 LGD 0.0269
135 H74 4.5909 3.6850 6.1096 H 1 LGD 0.0269
136 H75 3.6415 5.1480 6.4512 H 1 LGD 0.0269
@BOND
1 10 14 1
2 10 15 1
3 11 16 1
4 11 17 1
5 12 18 1
6 14 19 1
7 15 20 1
8 16 21 1
9 19 22 1
10 19 23 1
11 21 24 1
12 21 25 1
13 22 26 1
14 22 42 1
15 24 27 1
16 26 28 1
17 29 42 1
18 28 30 1
19 30 31 1
20 30 32 1
21 31 33 1
22 32 34 1
23 32 35 1
24 33 36 1
25 33 37 1
26 33 38 1
27 36 39 1
28 6 8 1
29 9 12 1
30 19 20 1
31 28 29 1
32 34 36 1
33 1 2 1
34 1 3 1
35 1 4 1
36 1 5 1
37 2 6 1
38 40 42 1
39 3 7 1
40 4 8 1
41 5 9 1
42 6 41 1
43 6 10 1
44 7 11 1
45 7 12 1
46 9 13 1
47 16 43 1
48 43 44 1
49 44 45 1
50 24 45 1
51 45 46 1
52 25 47 1
53 44 48 1
54 48 49 1
55 49 50 1
56 49 51 2
57 44 52 1
58 40 53 1
59 53 54 1
60 54 55 1
61 55 56 1
62 56 57 1
63 57 58 1
64 53 58 1
65 57 59 1
66 56 60 1
67 60 61 1
68 4 62 1
69 4 63 1
70 5 64 1
71 5 65 1
72 7 66 1
73 8 67 1
74 8 68 1
75 9 69 1
76 10 70 1
77 11 71 1
78 12 72 1
79 13 73 1
80 15 74 1
81 15 75 1
82 16 76 1
83 17 77 1
84 17 78 1
85 17 79 1
86 18 80 1
87 18 81 1
88 18 82 1
89 20 83 1
90 20 84 1
91 21 85 1
92 22 86 1
93 23 87 1
94 23 88 1
95 23 89 1
96 24 90 1
97 27 91 1
98 28 92 1
99 29 93 1
100 29 94 1
101 30 95 1
102 32 96 1
103 34 97 1
104 34 98 1
105 35 99 1
106 35 100 1
107 35 101 1
108 36 102 1
109 37 103 1
110 37 104 1
111 37 105 1
112 38 106 1
113 39 107 1
114 39 108 1
115 39 109 1
116 41 110 1
117 41 111 1
118 41 112 1
119 42 113 1
120 45 114 1
121 46 115 1
122 46 116 1
123 46 117 1
124 47 118 1
125 47 119 1
126 47 120 1
127 48 121 1
128 48 122 1
129 52 123 1
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131 54 125 1
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133 55 127 1
134 55 128 1
135 56 129 1
136 57 130 1
137 59 131 1
138 59 132 1
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140 61 134 1
141 61 135 1
142 61 136 1