@COMMENT
LIGANDBOX_ID = D05820-13
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D05820
NAME = Semduramicin_(USAN/INN)
MOLECULAR_FORMULA = C45H76O16
MOLECULAR_WEIGHT = 873.087
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 16
NUM_OF_CHIRAL_ATOMS = 23
TPSA = 210.5200
HOMO = -4.1619
LUMO = 3.7703
mLOGPA = -5.212
mLOGS = -1.614
mLOGD = 0.690
@MOLECULE
D05820-13
136 142 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.7341 1.5810 -3.2468 C.3 1 LGD 0.3496
2 O1 0.6577 1.4283 -2.3056 O.3 1 LGD -0.4426
3 O2 3.0291 1.6047 -2.5824 O.3 1 LGD -0.3906
4 C2 1.4784 2.9822 -3.8434 C.3 1 LGD -0.0870
5 C3 1.6855 0.4340 -4.2981 C.3 1 LGD -0.1217
6 C4 0.2959 2.6852 -1.6930 C.3 1 LGD 0.1530
7 C5 3.6975 0.3619 -2.2201 C.3 1 LGD 0.1745
8 C6 0.7006 3.7463 -2.7583 C.3 1 LGD -0.1016
9 C7 3.1038 0.0164 -4.7332 C.3 1 LGD 0.1506
10 C8 -1.2482 2.6984 -1.4047 C.3 1 LGD 0.1609
11 C9 3.0179 -0.2927 -0.9422 C.3 1 LGD -0.0782
12 C10 3.9150 -0.5150 -3.5168 C.3 1 LGD -0.0808
13 O3 3.0271 -0.9771 -5.7549 O.3 1 LGD -0.6072
14 O4 -1.6103 1.7785 -0.3477 O.3 1 LGD -0.4215
15 C11 -2.1473 2.2806 -2.5869 C.3 1 LGD -0.1040
16 C12 3.8565 -0.0501 0.3601 C.3 1 LGD 0.1613
17 C13 2.5472 -1.7669 -1.0779 C.3 1 LGD -0.0777
18 C14 5.4229 -0.6018 -3.8694 C.3 1 LGD -0.0872
19 C15 -2.1366 0.5229 -0.8452 C.3 1 LGD 0.1728
20 C16 -2.5189 0.8149 -2.3261 C.3 1 LGD -0.0878
21 C17 5.2696 -0.7179 0.3964 C.3 1 LGD 0.0824
22 C18 -3.4074 0.1965 0.0057 C.3 1 LGD 0.1168
23 C19 -1.0418 -0.5867 -0.7085 C.3 1 LGD -0.0953
24 C20 6.0974 -0.2219 1.6198 C.3 1 LGD 0.1222
25 O5 5.1015 -2.1492 0.5106 O.3 1 LGD -0.4428
26 O6 -3.9617 -1.0441 -0.4789 O.3 1 LGD -0.4075
27 O7 7.4267 -0.7387 1.5628 O.3 1 LGD -0.6027
28 C21 -4.5599 -1.7612 0.6111 C.3 1 LGD 0.1506
29 C22 -3.5649 -1.5100 1.7538 C.3 1 LGD -0.1131
30 C23 -4.7171 -3.2672 0.2567 C.3 1 LGD 0.1829
31 O8 -3.4917 -3.7279 -0.3663 O.3 1 LGD -0.4520
32 C24 -5.9186 -3.5983 -0.6813 C.3 1 LGD -0.0817
33 C25 -3.3498 -5.1502 -0.5840 C.3 1 LGD 0.3617
34 C26 -5.8988 -5.1105 -1.0545 C.3 1 LGD -0.0679
35 C27 -6.0262 -2.6788 -1.9302 C.3 1 LGD -0.0767
36 C28 -4.5065 -5.6400 -1.5256 C.3 1 LGD -0.0849
37 C29 -3.3211 -5.8854 0.7859 C.3 1 LGD -0.1156
38 O9 -2.0846 -5.3514 -1.2030 O.3 1 LGD -0.5897
39 C30 -4.2465 -5.3187 -3.0269 C.3 1 LGD -0.0787
40 O10 -3.9496 0.7771 2.3373 O.3 1 LGD -0.4670
41 C31 1.1075 2.8791 -0.3814 C.3 1 LGD -0.1069
42 C32 -3.1144 -0.0644 1.5137 C.3 1 LGD 0.1309
43 O11 4.0328 1.3815 0.4616 O.3 1 LGD -0.4191
44 C33 4.6670 1.9099 1.6431 C.3 1 LGD 0.3635
45 C34 6.1249 1.3335 1.7002 C.3 1 LGD -0.0464
46 C35 6.9126 1.8253 2.9503 C.3 1 LGD -0.0724
47 C36 6.0280 -2.9558 -0.2417 C.3 1 LGD 0.1249
48 C37 4.6038 3.4604 1.5217 C.3 1 LGD -0.2307
49 C38 5.4054 4.0158 0.3368 C.2 1 LGD 0.9365
50 O12 4.8697 4.0080 -0.7576 O.co2 1 LGD -0.8302
51 O13 6.5149 4.4596 0.5763 O.co2 1 LGD -0.8302
52 O14 3.9148 1.5161 2.7911 O.3 1 LGD -0.6455
53 C39 -3.6087 2.1751 2.3944 C.3 1 LGD 0.3474
54 C40 -4.7103 2.9240 3.1851 C.3 1 LGD -0.0917
55 C41 -4.6637 2.6094 4.6998 C.3 1 LGD -0.0641
56 C42 -3.2476 2.8384 5.2806 C.3 1 LGD 0.1249
57 C43 -2.1610 2.0810 4.4562 C.3 1 LGD 0.1357
58 O15 -2.3207 2.3744 3.0393 O.3 1 LGD -0.4234
59 C44 -2.1341 0.5531 4.7193 C.3 1 LGD -0.1164
60 O16 -2.9933 4.2613 5.2396 O.3 1 LGD -0.4253
61 C45 -1.9066 4.7347 6.0561 C.3 1 LGD 0.1245
62 H1 2.4184 3.4918 -4.0922 H 1 LGD 0.0565
63 H2 0.8744 2.9246 -4.7576 H 1 LGD 0.0565
64 H3 1.1659 -0.4337 -3.8705 H 1 LGD 0.0500
65 H4 1.1053 0.7402 -5.1775 H 1 LGD 0.0500
66 H5 4.7018 0.6631 -1.9022 H 1 LGD 0.1029
67 H6 -0.1710 4.2516 -3.1932 H 1 LGD 0.0537
68 H7 1.3365 4.5255 -2.3177 H 1 LGD 0.0537
69 H8 3.6094 0.9056 -5.1321 H 1 LGD 0.0444
70 H9 -1.5185 3.7165 -1.0970 H 1 LGD 0.0673
71 H10 2.0907 0.2514 -0.7540 H 1 LGD 0.0822
72 H11 3.5853 -1.5428 -3.3457 H 1 LGD 0.0557
73 H12 2.5454 -0.5855 -6.5039 H 1 LGD 0.3952
74 H13 -3.0534 2.8997 -2.5949 H 1 LGD 0.0444
75 H14 -1.6523 2.3973 -3.5591 H 1 LGD 0.0444
76 H15 3.2734 -0.4100 1.2175 H 1 LGD 0.0437
77 H16 3.3719 -2.4452 -1.3230 H 1 LGD 0.0296
78 H17 2.0941 -2.1132 -0.1403 H 1 LGD 0.0296
79 H18 1.7859 -1.8597 -1.8623 H 1 LGD 0.0296
80 H19 5.8292 0.3906 -4.1029 H 1 LGD 0.0359
81 H20 5.9949 -1.0155 -3.0295 H 1 LGD 0.0359
82 H21 5.5881 -1.2524 -4.7375 H 1 LGD 0.0359
83 H22 -3.5879 0.6550 -2.5174 H 1 LGD 0.0517
84 H23 -1.9680 0.1611 -3.0143 H 1 LGD 0.0517
85 H24 5.8120 -0.4694 -0.5239 H 1 LGD 0.0623
86 H25 -4.1501 0.9972 -0.1034 H 1 LGD 0.0559
87 H26 -0.3763 -0.6262 -1.5753 H 1 LGD 0.0486
88 H27 -0.4249 -0.4265 0.1845 H 1 LGD 0.0486
89 H28 -1.4893 -1.5846 -0.6283 H 1 LGD 0.0486
90 H29 5.6100 -0.5974 2.5289 H 1 LGD 0.0415
91 H30 7.3516 -1.7087 1.5811 H 1 LGD 0.3916
92 H31 -5.5320 -1.3195 0.8666 H 1 LGD 0.0536
93 H32 -2.7035 -2.1865 1.6822 H 1 LGD 0.0665
94 H33 -4.0317 -1.6462 2.7378 H 1 LGD 0.0665
95 H34 -4.8764 -3.7973 1.2030 H 1 LGD 0.0374
96 H35 -6.8360 -3.4318 -0.1017 H 1 LGD 0.0371
97 H36 -6.2018 -5.6823 -0.1680 H 1 LGD 0.0363
98 H37 -6.6643 -5.3243 -1.8115 H 1 LGD 0.0363
99 H38 -6.7467 -3.0797 -2.6541 H 1 LGD 0.0384
100 H39 -6.3745 -1.6786 -1.6433 H 1 LGD 0.0384
101 H40 -5.0615 -2.5610 -2.4356 H 1 LGD 0.0384
102 H41 -4.5504 -6.7348 -1.4541 H 1 LGD 0.0470
103 H42 -4.3080 -5.9114 1.2625 H 1 LGD 0.0450
104 H43 -2.9977 -6.9262 0.6575 H 1 LGD 0.0450
105 H44 -2.6225 -5.3948 1.4759 H 1 LGD 0.0450
106 H45 -1.7684 -4.4660 -1.4528 H 1 LGD 0.4326
107 H46 -3.8938 -4.2911 -3.1688 H 1 LGD 0.0369
108 H47 -3.4797 -5.9889 -3.4356 H 1 LGD 0.0369
109 H48 -5.1544 -5.4587 -3.6267 H 1 LGD 0.0369
110 H49 0.9801 2.0261 0.2963 H 1 LGD 0.0610
111 H50 2.1772 2.9988 -0.5862 H 1 LGD 0.0610
112 H51 0.7728 3.7798 0.1484 H 1 LGD 0.0610
113 H52 -2.0562 0.0658 1.7705 H 1 LGD 0.0896
114 H53 6.6638 1.6892 0.8125 H 1 LGD 0.1029
115 H54 7.9439 1.4517 2.9389 H 1 LGD 0.0361
116 H55 6.9711 2.9197 2.9806 H 1 LGD 0.0361
117 H56 6.4393 1.4815 3.8786 H 1 LGD 0.0361
118 H57 5.9367 -2.7379 -1.3131 H 1 LGD 0.0258
119 H58 7.0613 -2.7675 0.0713 H 1 LGD 0.0258
120 H59 5.8064 -4.0184 -0.0842 H 1 LGD 0.0258
121 H60 3.5591 3.7768 1.4055 H 1 LGD 0.0362
122 H61 4.9634 3.9306 2.4458 H 1 LGD 0.0362
123 H62 2.9847 1.7192 2.5922 H 1 LGD 0.4060
124 H63 -3.5658 2.5765 1.3755 H 1 LGD 0.0898
125 H64 -4.5910 4.0038 3.0311 H 1 LGD 0.0564
126 H65 -5.6972 2.6587 2.7849 H 1 LGD 0.0564
127 H66 -5.3899 3.2362 5.2331 H 1 LGD 0.0484
128 H67 -4.9684 1.5689 4.8691 H 1 LGD 0.0484
129 H68 -3.2310 2.4922 6.3223 H 1 LGD 0.0352
130 H69 -1.1751 2.4493 4.7612 H 1 LGD 0.0768
131 H70 -3.1241 0.0938 4.6216 H 1 LGD 0.0411
132 H71 -1.4434 0.0522 4.0300 H 1 LGD 0.0411
133 H72 -1.7830 0.3555 5.7397 H 1 LGD 0.0411
134 H73 -2.0368 4.4065 7.0951 H 1 LGD 0.0307
135 H74 -0.9456 4.3636 5.6807 H 1 LGD 0.0307
136 H75 -1.8816 5.8312 6.0378 H 1 LGD 0.0307
@BOND
1 10 14 1
2 10 15 1
3 11 16 1
4 11 17 1
5 12 18 1
6 14 19 1
7 15 20 1
8 16 21 1
9 19 22 1
10 19 23 1
11 21 24 1
12 21 25 1
13 22 26 1
14 22 42 1
15 24 27 1
16 26 28 1
17 29 42 1
18 28 30 1
19 30 31 1
20 30 32 1
21 31 33 1
22 32 34 1
23 32 35 1
24 33 36 1
25 33 37 1
26 33 38 1
27 36 39 1
28 6 8 1
29 9 12 1
30 19 20 1
31 28 29 1
32 34 36 1
33 1 2 1
34 1 3 1
35 1 4 1
36 1 5 1
37 2 6 1
38 40 42 1
39 3 7 1
40 4 8 1
41 5 9 1
42 6 41 1
43 6 10 1
44 7 11 1
45 7 12 1
46 9 13 1
47 16 43 1
48 43 44 1
49 44 45 1
50 24 45 1
51 45 46 1
52 25 47 1
53 44 48 1
54 48 49 1
55 49 50 1
56 49 51 2
57 44 52 1
58 40 53 1
59 53 54 1
60 54 55 1
61 55 56 1
62 56 57 1
63 57 58 1
64 53 58 1
65 57 59 1
66 56 60 1
67 60 61 1
68 4 62 1
69 4 63 1
70 5 64 1
71 5 65 1
72 7 66 1
73 8 67 1
74 8 68 1
75 9 69 1
76 10 70 1
77 11 71 1
78 12 72 1
79 13 73 1
80 15 74 1
81 15 75 1
82 16 76 1
83 17 77 1
84 17 78 1
85 17 79 1
86 18 80 1
87 18 81 1
88 18 82 1
89 20 83 1
90 20 84 1
91 21 85 1
92 22 86 1
93 23 87 1
94 23 88 1
95 23 89 1
96 24 90 1
97 27 91 1
98 28 92 1
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100 29 94 1
101 30 95 1
102 32 96 1
103 34 97 1
104 34 98 1
105 35 99 1
106 35 100 1
107 35 101 1
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109 37 103 1
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111 37 105 1
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114 39 108 1
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140 61 134 1
141 61 135 1
142 61 136 1