@COMMENT
LIGANDBOX_ID = D06199-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D06199
NAME = Trabectedin_(JAN/USAN/INN)_Yondelis_(TN)
MOLECULAR_FORMULA = C39H43N3O11S
MOLECULAR_WEIGHT = 761.848
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 11
NUM_OF_CHIRAL_ATOMS = 7
TPSA = 168.7200
HOMO = -15.1091
LUMO = -9.4642
mLOGS = -0.709
mLOGPA = -4.375
mLOGD = 0.029
@MOLECULE
D06199-02
100 108 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.3324 1.5416 1.2169 C.3 1 LGD 0.1855
2 C2 2.7697 1.8261 1.7114 C.ar 1 LGD -0.1876
3 C3 3.0157 2.7631 2.7423 C.ar 1 LGD -0.0711
4 C4 1.8668 3.4946 3.4239 C.3 1 LGD -0.0590
5 C5 0.5782 3.4458 2.5873 C.3 1 LGD 0.1081
6 N1 0.3365 2.0437 2.1983 N.4 1 LGD -0.7392
7 C6 -4.5796 0.2248 -2.0157 C.3 1 LGD 0.0789
8 C7 -3.3294 0.9086 -2.6258 C.3 1 LGD 0.3113
9 N2 -2.0920 0.5687 -1.8661 N.4 1 LGD -0.7147
10 C8 -1.9448 -0.9183 -1.7874 C.3 1 LGD 0.1314
11 C9 -3.2354 -1.6628 -1.2913 C.3 1 LGD 0.1947
12 C10 -3.5742 -1.4039 0.1739 C.ar 1 LGD -0.2277
13 C11 -4.2893 -0.2471 0.5325 C.ar 1 LGD -0.0931
14 C12 -4.8804 0.6626 -0.5410 C.3 1 LGD -0.0547
15 C13 -4.5341 0.0287 1.8888 C.ar 1 LGD -0.1333
16 C14 -4.0772 -0.8421 2.8945 C.ar 1 LGD 0.0103
17 C15 -3.3940 -2.0183 2.5276 C.ar 1 LGD 0.0486
18 C16 -3.1666 -2.3122 1.1711 C.ar 1 LGD 0.1857
19 C17 -0.6743 -1.2502 -0.9594 C.3 1 LGD 0.1384
20 C18 0.4984 -0.8252 -1.8169 C.ar 1 LGD -0.1759
21 C19 0.3701 0.3715 -2.5587 C.ar 1 LGD -0.1455
22 C20 -0.9076 1.2384 -2.5144 C.3 1 LGD 0.1819
23 C21 1.6690 -1.6286 -1.9209 C.ar 1 LGD 0.1499
24 C22 2.7505 -1.2250 -2.7433 C.ar 1 LGD -0.0311
25 C23 2.6032 -0.0118 -3.4286 C.ar 1 LGD 0.1185
26 C24 1.4621 0.7404 -3.3533 C.ar 1 LGD 0.0988
27 O1 3.5063 0.5765 -4.2615 O.3 1 LGD -0.2795
28 C25 2.9009 1.8174 -4.7239 C.3 1 LGD 0.3303
29 O2 1.5679 1.8484 -4.1377 O.3 1 LGD -0.3280
30 O3 -3.5585 2.3118 -2.7126 O.3 1 LGD -0.5050
31 N3 -4.3704 -1.2377 -2.1422 N.4 1 LGD -0.6666
32 C26 -5.6039 -1.9994 -1.8397 C.3 1 LGD 0.0934
33 O4 -2.5234 -3.4688 0.8280 O.3 1 LGD -0.5037
34 O5 -2.9313 -2.8788 3.4976 O.3 1 LGD -0.3299
35 C27 -4.3325 -0.5127 4.3617 C.3 1 LGD -0.0669
36 C28 -1.5723 -2.7477 3.9462 C.3 1 LGD 0.1243
37 C29 -0.6225 2.6071 -1.8159 C.3 1 LGD 0.1292
38 S1 -0.6880 -0.3907 0.7041 S.3 1 LGD -0.4191
39 O6 -0.2145 2.3566 -0.4587 O.3 1 LGD -0.4824
40 C30 1.1152 2.2112 -0.1630 C.2 1 LGD 0.6161
41 O7 2.0230 2.5732 -0.8941 O.2 1 LGD -0.3961
42 C31 4.0117 -2.0701 -2.9078 C.3 1 LGD -0.0610
43 C32 1.0785 0.0111 1.0902 C.3 1 LGD 0.0084
44 O8 1.7188 -2.8308 -1.2459 O.3 1 LGD -0.3717
45 C33 2.5224 -3.0910 -0.1740 C.2 1 LGD 0.6477
46 C34 3.8673 1.1957 1.0837 C.ar 1 LGD -0.1206
47 C35 5.1894 1.4757 1.4854 C.ar 1 LGD 0.0856
48 C36 5.4149 2.3882 2.5288 C.ar 1 LGD 0.1937
49 C37 4.3340 3.0265 3.1522 C.ar 1 LGD -0.1137
50 O9 6.2828 0.8898 0.8717 O.3 1 LGD -0.3419
51 C38 6.1656 -0.0462 -0.2147 C.3 1 LGD 0.1381
52 O10 6.6894 2.6679 2.9293 O.3 1 LGD -0.4486
53 C39 2.2858 -4.4956 0.3690 C.3 1 LGD -0.1416
54 O11 3.3241 -2.3053 0.3007 O.2 1 LGD -0.5151
55 H1 1.6760 3.0388 4.4037 H 1 LGD 0.1040
56 H2 2.1329 4.5429 3.6093 H 1 LGD 0.1040
57 H3 -0.2625 3.8154 3.1778 H 1 LGD 0.1122
58 H4 0.6832 4.0597 1.6905 H 1 LGD 0.1122
59 H5 -0.5812 1.9607 1.7813 H 1 LGD 0.4540
60 H6 -5.4358 0.5038 -2.6333 H 1 LGD 0.1616
61 H7 -3.2053 0.5394 -3.6461 H 1 LGD 0.1443
62 H8 -1.7650 -1.2698 -2.8050 H 1 LGD 0.1246
63 H9 -3.0866 -2.7345 -1.4382 H 1 LGD 0.1612
64 H10 -5.9704 0.6712 -0.4149 H 1 LGD 0.1033
65 H11 -4.5584 1.6965 -0.3694 H 1 LGD 0.1033
66 H12 -5.0889 0.9223 2.1617 H 1 LGD 0.1698
67 H13 -0.6346 -2.3329 -0.7904 H 1 LGD 0.1526
68 H14 -1.1852 1.4499 -3.5490 H 1 LGD 0.1372
69 H15 3.4853 2.6723 -4.3639 H 1 LGD 0.1148
70 H16 2.8341 1.8205 -5.8179 H 1 LGD 0.1148
71 H17 -3.6302 2.6597 -1.8069 H 1 LGD 0.4370
72 H18 -5.9067 -1.8229 -0.8061 H 1 LGD 0.1230
73 H19 -6.4053 -1.6800 -2.5086 H 1 LGD 0.1230
74 H20 -5.4199 -3.0659 -1.9820 H 1 LGD 0.1230
75 H21 -2.3813 -3.9798 1.6449 H 1 LGD 0.4809
76 H22 -4.6982 -1.3913 4.9079 H 1 LGD 0.0785
77 H23 -3.4115 -0.1714 4.8503 H 1 LGD 0.0785
78 H24 -5.0834 0.2792 4.4740 H 1 LGD 0.0785
79 H25 -1.4119 -1.7545 4.3838 H 1 LGD 0.0509
80 H26 -1.3543 -3.5069 4.7074 H 1 LGD 0.0509
81 H27 -0.8778 -2.8799 3.1070 H 1 LGD 0.0509
82 H28 0.1457 3.1655 -2.3651 H 1 LGD 0.1208
83 H29 -1.5202 3.2316 -1.8085 H 1 LGD 0.1208
84 H30 3.7758 -3.1413 -2.9300 H 1 LGD 0.0815
85 H31 4.5356 -1.8352 -3.8426 H 1 LGD 0.0815
86 H32 4.7118 -1.8959 -2.0824 H 1 LGD 0.0815
87 H33 1.7290 -0.4017 0.3198 H 1 LGD 0.1327
88 H34 1.3372 -0.4775 2.0378 H 1 LGD 0.1327
89 H35 3.6866 0.5108 0.2625 H 1 LGD 0.1424
90 H36 4.5223 3.7386 3.9512 H 1 LGD 0.1870
91 H37 5.6125 -0.9361 0.1092 H 1 LGD 0.0554
92 H38 5.6431 0.4146 -1.0628 H 1 LGD 0.0554
93 H39 7.1629 -0.3586 -0.5475 H 1 LGD 0.0554
94 H40 7.2946 2.1416 2.3768 H 1 LGD 0.4683
95 H41 2.9378 -4.6870 1.2304 H 1 LGD 0.0932
96 H42 1.2397 -4.6033 0.6815 H 1 LGD 0.0932
97 H43 2.4958 -5.2381 -0.4107 H 1 LGD 0.0932
98 H44 0.3693 1.4640 3.0247 H 1 LGD 0.4540
99 H45 -2.1694 0.9086 -0.9167 H 1 LGD 0.4664
100 H46 -4.1248 -1.4355 -3.1030 H 1 LGD 0.4511
@BOND
1 1 2 1
2 2 3 ar
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 7 8 1
8 8 9 1
9 9 10 1
10 10 11 1
11 11 12 1
12 12 13 ar
13 13 14 1
14 7 14 1
15 13 15 ar
16 15 16 ar
17 16 17 ar
18 17 18 ar
19 12 18 ar
20 10 19 1
21 19 20 1
22 20 21 ar
23 21 22 1
24 9 22 1
25 20 23 ar
26 23 24 ar
27 24 25 ar
28 25 26 ar
29 21 26 ar
30 25 27 1
31 27 28 1
32 28 29 1
33 26 29 1
34 8 30 1
35 7 31 1
36 11 31 1
37 31 32 1
38 18 33 1
39 17 34 1
40 16 35 1
41 34 36 1
42 22 37 1
43 19 38 1
44 37 39 1
45 39 40 1
46 40 41 2
47 24 42 1
48 1 40 1
49 1 43 1
50 38 43 1
51 23 44 1
52 44 45 1
53 2 46 ar
54 46 47 ar
55 47 48 ar
56 48 49 ar
57 3 49 ar
58 47 50 1
59 50 51 1
60 48 52 1
61 45 53 1
62 45 54 2
63 4 55 1
64 4 56 1
65 5 57 1
66 5 58 1
67 6 59 1
68 7 60 1
69 8 61 1
70 10 62 1
71 11 63 1
72 14 64 1
73 14 65 1
74 15 66 1
75 19 67 1
76 22 68 1
77 28 69 1
78 28 70 1
79 30 71 1
80 32 72 1
81 32 73 1
82 32 74 1
83 33 75 1
84 35 76 1
85 35 77 1
86 35 78 1
87 36 79 1
88 36 80 1
89 36 81 1
90 37 82 1
91 37 83 1
92 42 84 1
93 42 85 1
94 42 86 1
95 43 87 1
96 43 88 1
97 46 89 1
98 49 90 1
99 51 91 1
100 51 92 1
101 51 93 1
102 52 94 1
103 53 95 1
104 53 96 1
105 53 97 1
106 6 98 1
107 9 99 1
108 31 100 1