@COMMENT
LIGANDBOX_ID = D06386-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D06386
NAME = Zorubicin_hydrochloride_(USAN)
MOLECULAR_FORMULA = C34H35N3O10
MOLECULAR_WEIGHT = 645.665
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 7
NUM_OF_ACCEPTOR = 11
NUM_OF_CHIRAL_ATOMS = 6
TPSA = 210.2300
HOMO = -10.8120
LUMO = -3.7109
mLOGPA = -6.794
mLOGD = 1.519
mLOGS = -1.432
@MOLECULE
D06386-01
83 88 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 18.1830 -24.1960 0.0630 C.3 1 LGD 0.3567
2 O1 19.3760 -24.8850 0.5120 O.3 1 LGD -0.4312
3 C2 19.5370 -26.2470 0.0450 C.3 1 LGD 0.1173
4 C3 18.3700 -27.1000 0.6130 C.3 1 LGD 0.0974
5 C4 17.0220 -26.4910 0.1360 C.3 1 LGD 0.0640
6 C5 16.9290 -24.9890 0.5130 C.3 1 LGD -0.1264
7 C6 13.4600 -17.2520 -5.4890 C.ar 1 LGD -0.1936
8 C7 13.8510 -17.5090 -6.8080 C.ar 1 LGD -0.0722
9 C8 14.6660 -18.6100 -7.0940 C.ar 1 LGD -0.1160
10 C9 15.0930 -19.4700 -6.0640 C.ar 1 LGD -0.1008
11 C10 14.6880 -19.2340 -4.7350 C.ar 1 LGD -0.1610
12 C11 13.8760 -18.1060 -4.4440 C.ar 1 LGD 0.2017
13 C12 15.9780 -20.6370 -6.3940 C.2 1 LGD 0.6034
14 C13 16.7590 -21.2680 -5.2620 C.ar 1 LGD -0.1781
15 C14 16.3470 -21.0460 -3.9320 C.ar 1 LGD -0.1909
16 C15 15.1150 -20.2080 -3.6630 C.2 1 LGD 0.6124
17 C16 17.9050 -22.0640 -5.5140 C.ar 1 LGD 0.1559
18 C17 18.6310 -22.6490 -4.4540 C.ar 1 LGD -0.0329
19 C18 18.2230 -22.4150 -3.1200 C.ar 1 LGD -0.0985
20 C19 17.0870 -21.6160 -2.8670 C.ar 1 LGD 0.1621
21 C20 19.8810 -23.4900 -4.7730 C.3 1 LGD -0.0461
22 C21 20.3540 -24.4160 -3.6210 C.3 1 LGD 0.1548
23 C22 20.3830 -23.5730 -2.3130 C.3 1 LGD -0.1340
24 C23 18.9860 -23.0220 -1.9330 C.3 1 LGD 0.2086
25 O2 13.5210 -17.8400 -3.1330 O.3 1 LGD -0.3383
26 C24 12.6860 -16.7380 -2.7360 C.3 1 LGD 0.1376
27 O3 14.4580 -20.3650 -2.6470 O.2 1 LGD -0.5271
28 O4 16.0450 -21.0540 -7.5390 O.2 1 LGD -0.5236
29 O5 18.3390 -22.2580 -6.7980 O.3 1 LGD -0.5014
30 O6 16.7200 -21.3770 -1.5680 O.3 1 LGD -0.5281
31 O7 18.1800 -24.0900 -1.3780 O.3 1 LGD -0.4713
32 C25 21.7370 -25.0130 -3.9510 C.2 1 LGD 0.3223
33 N1 22.8070 -24.6340 -3.3340 N.2 1 LGD -0.4184
34 C26 21.7630 -26.0620 -5.0670 C.3 1 LGD -0.1699
35 N2 24.0310 -25.1620 -3.6170 N.am 1 LGD -0.3501
36 C27 25.1810 -24.7630 -2.9460 C.2 1 LGD 0.6978
37 C28 26.5090 -25.3840 -3.3100 C.ar 1 LGD -0.1464
38 O8 25.0980 -23.9160 -2.0710 O.2 1 LGD -0.5485
39 C29 27.6630 -25.0690 -2.5610 C.ar 1 LGD -0.0866
40 C30 28.9050 -25.6390 -2.8880 C.ar 1 LGD -0.1352
41 C31 29.0090 -26.5270 -3.9670 C.ar 1 LGD -0.0968
42 C32 27.8690 -26.8470 -4.7210 C.ar 1 LGD -0.1352
43 C33 26.6260 -26.2800 -4.3960 C.ar 1 LGD -0.0866
44 N3 15.8800 -27.2300 0.6990 N.4 1 LGD -0.8074
45 O9 18.4280 -27.1320 2.0420 O.3 1 LGD -0.5990
46 C34 20.9330 -26.7450 0.4830 C.3 1 LGD -0.0866
47 O10 19.4060 -25.4750 -3.4640 O.3 1 LGD -0.6161
48 H1 18.1460 -23.1930 0.5050 H 1 LGD 0.1220
49 H2 19.4950 -26.2790 -1.0490 H 1 LGD 0.0834
50 H3 18.4520 -28.1220 0.2200 H 1 LGD 0.0962
51 H4 16.9790 -26.5700 -0.9580 H 1 LGD 0.1254
52 H5 16.0330 -24.5470 0.0590 H 1 LGD 0.0806
53 H6 16.8150 -24.8830 1.6000 H 1 LGD 0.0806
54 H7 12.8370 -16.3850 -5.2940 H 1 LGD 0.1510
55 H8 13.5290 -16.8490 -7.6080 H 1 LGD 0.1518
56 H9 14.9710 -18.7880 -8.1220 H 1 LGD 0.1608
57 H10 19.7070 -24.1040 -5.6650 H 1 LGD 0.0828
58 H11 20.7010 -22.8070 -5.0340 H 1 LGD 0.0828
59 H12 20.8020 -24.1600 -1.4880 H 1 LGD 0.0864
60 H13 21.0600 -22.7200 -2.4490 H 1 LGD 0.0864
61 H14 19.1300 -22.2350 -1.1810 H 1 LGD 0.0785
62 H15 11.6960 -16.8220 -3.2020 H 1 LGD 0.0488
63 H16 12.5590 -16.7430 -1.6460 H 1 LGD 0.0488
64 H17 13.1450 -15.7850 -3.0280 H 1 LGD 0.0488
65 H18 17.6800 -21.8680 -7.4050 H 1 LGD 0.4650
66 H19 15.8600 -20.9130 -1.5760 H 1 LGD 0.4662
67 H20 20.7790 -26.2170 -5.5270 H 1 LGD 0.0536
68 H21 22.4460 -25.7610 -5.8710 H 1 LGD 0.0536
69 H22 22.0950 -27.0340 -4.6800 H 1 LGD 0.0536
70 H23 24.1040 -25.8710 -4.3310 H 1 LGD 0.3027
71 H24 27.6030 -24.3830 -1.7210 H 1 LGD 0.1398
72 H25 29.7860 -25.3900 -2.3030 H 1 LGD 0.1432
73 H26 29.9690 -26.9670 -4.2200 H 1 LGD 0.1424
74 H27 27.9500 -27.5340 -5.5590 H 1 LGD 0.1432
75 H28 25.7610 -26.5420 -4.9980 H 1 LGD 0.1398
76 H29 15.9020 -28.1820 0.3610 H 1 LGD 0.4593
77 H30 15.9040 -27.1440 1.7050 H 1 LGD 0.4593
78 H31 18.8060 -26.2780 2.3190 H 1 LGD 0.4441
79 H32 21.0700 -27.7990 0.2110 H 1 LGD 0.0666
80 H33 21.7190 -26.1630 -0.0140 H 1 LGD 0.0666
81 H34 21.0700 -26.6470 1.5670 H 1 LGD 0.0666
82 H35 18.7500 -25.1610 -2.8100 H 1 LGD 0.4223
83 H36 15.0330 -26.8622 0.3150 H 1 LGD 0.4593
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 7 8 ar
8 8 9 ar
9 9 10 ar
10 10 11 ar
11 11 12 ar
12 7 12 ar
13 10 13 1
14 13 14 1
15 14 15 ar
16 15 16 1
17 11 16 1
18 14 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 15 20 ar
23 18 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 19 24 1
28 12 25 1
29 25 26 1
30 16 27 2
31 13 28 2
32 17 29 1
33 20 30 1
34 24 31 1
35 22 32 1
36 32 33 2
37 32 34 1
38 33 35 1
39 35 36 am
40 36 37 1
41 36 38 2
42 37 39 ar
43 39 40 ar
44 40 41 ar
45 41 42 ar
46 42 43 ar
47 37 43 ar
48 1 31 1
49 5 44 1
50 4 45 1
51 3 46 1
52 22 47 1
53 1 48 1
54 3 49 1
55 4 50 1
56 5 51 1
57 6 52 1
58 6 53 1
59 7 54 1
60 8 55 1
61 9 56 1
62 21 57 1
63 21 58 1
64 23 59 1
65 23 60 1
66 24 61 1
67 26 62 1
68 26 63 1
69 26 64 1
70 29 65 1
71 30 66 1
72 34 67 1
73 34 68 1
74 34 69 1
75 35 70 1
76 39 71 1
77 40 72 1
78 41 73 1
79 42 74 1
80 43 75 1
81 44 76 1
82 44 77 1
83 45 78 1
84 46 79 1
85 46 80 1
86 46 81 1
87 47 82 1
88 44 83 1