@COMMENT
LIGANDBOX_ID = D06386-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D06386
NAME = Zorubicin_hydrochloride_(USAN)
MOLECULAR_FORMULA = C34H35N3O10
MOLECULAR_WEIGHT = 645.665
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 7
NUM_OF_ACCEPTOR = 11
NUM_OF_CHIRAL_ATOMS = 6
TPSA = 210.2300
HOMO = -10.8120
LUMO = -3.7109
mLOGPA = -6.794
mLOGD = 1.519
mLOGS = -1.432
@MOLECULE
D06386-04
83 88 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.0865 -0.6767 2.9820 C.3 1 LGD 0.3585
2 O1 0.0968 -1.3863 3.4193 O.3 1 LGD -0.4211
3 C2 0.2479 -2.7472 2.9513 C.3 1 LGD 0.1295
4 C3 -0.9444 -3.5811 3.4917 C.3 1 LGD 0.0912
5 C4 -2.2780 -2.9427 3.0368 C.3 1 LGD 0.0668
6 C5 -2.3401 -1.4550 3.4499 C.3 1 LGD -0.1244
7 C6 -5.8217 6.2686 -2.5770 C.ar 1 LGD -0.1935
8 C7 -5.4294 6.0146 -3.8963 C.ar 1 LGD -0.0721
9 C8 -4.6136 4.9151 -4.1848 C.ar 1 LGD -0.1159
10 C9 -4.1847 4.0535 -3.1563 C.ar 1 LGD -0.1002
11 C10 -4.5919 4.2877 -1.8262 C.ar 1 LGD -0.1613
12 C11 -5.4082 5.4121 -1.5334 C.ar 1 LGD 0.2016
13 C12 -3.2960 2.8893 -3.4886 C.2 1 LGD 0.6037
14 C13 -2.5201 2.2516 -2.3558 C.ar 1 LGD -0.1789
15 C14 -2.9368 2.4697 -1.0237 C.ar 1 LGD -0.1924
16 C15 -4.1619 3.3182 -0.7527 C.2 1 LGD 0.6121
17 C16 -1.3761 1.4528 -2.6070 C.ar 1 LGD 0.1557
18 C17 -0.6515 0.8654 -1.5464 C.ar 1 LGD -0.0354
19 C18 -1.0648 1.0929 -0.2130 C.ar 1 LGD -0.1000
20 C19 -2.2029 1.8886 0.0395 C.ar 1 LGD 0.1630
21 C20 0.6041 0.0309 -1.8636 C.3 1 LGD -0.0497
22 C21 1.0748 -0.8996 -0.7155 C.3 1 LGD 0.1556
23 C22 1.0947 -0.0645 0.5971 C.3 1 LGD -0.1343
24 C23 -0.3013 0.4907 0.9750 C.3 1 LGD 0.2090
25 O2 -5.7710 5.6692 -0.2227 O.3 1 LGD -0.3364
26 C24 -6.5944 6.7797 0.1742 C.3 1 LGD 0.1369
27 O3 -4.8072 3.1813 0.2742 O.2 1 LGD -0.5273
28 O4 -3.2180 2.4796 -4.6359 O.2 1 LGD -0.5239
29 O5 -0.9419 1.2604 -3.8908 O.3 1 LGD -0.5008
30 O6 -2.5806 2.1113 1.3366 O.3 1 LGD -0.5269
31 O7 -1.1105 -0.5684 1.5416 O.3 1 LGD -0.4739
32 C25 2.4626 -1.4907 -1.0426 C.2 1 LGD 0.3240
33 N1 3.5281 -1.1152 -0.4163 N.2 1 LGD -0.4154
34 C26 2.4981 -2.5340 -2.1631 C.3 1 LGD -0.1700
35 N2 4.7551 -1.6363 -0.7033 N.am 1 LGD -0.3503
36 C27 5.9027 -1.2487 -0.0225 C.2 1 LGD 0.6977
37 C28 7.2292 -1.8665 -0.3946 C.ar 1 LGD -0.1464
38 O8 5.8189 -0.4157 0.8667 O.2 1 LGD -0.5483
39 C29 8.3869 -1.5486 0.3476 C.ar 1 LGD -0.0866
40 C30 9.6271 -2.1169 0.0155 C.ar 1 LGD -0.1352
41 C31 9.7266 -3.0080 -1.0627 C.ar 1 LGD -0.0967
42 C32 8.5839 -3.3304 -1.8094 C.ar 1 LGD -0.1352
43 C33 7.3413 -2.7646 -1.4794 C.ar 1 LGD -0.0866
44 N3 -3.4103 -3.6693 3.6394 N.4 1 LGD -0.8150
45 O9 -0.8756 -4.9296 3.0255 O.3 1 LGD -0.5901
46 C34 1.6199 -3.2547 3.4481 C.3 1 LGD -0.0866
47 O10 0.1288 -1.9620 -0.5668 O.3 1 LGD -0.6167
48 H1 -1.1017 0.3261 3.4260 H 1 LGD 0.1214
49 H2 0.2420 -2.7728 1.8561 H 1 LGD 0.0752
50 H3 -0.9045 -3.5715 4.5890 H 1 LGD 0.1045
51 H4 -2.3486 -3.0115 1.9491 H 1 LGD 0.1244
52 H5 -3.2403 -0.9881 3.0301 H 1 LGD 0.0800
53 H6 -2.4190 -1.3749 4.5418 H 1 LGD 0.0800
54 H7 -6.4455 7.1351 -2.3826 H 1 LGD 0.1511
55 H8 -5.7516 6.6759 -4.6957 H 1 LGD 0.1520
56 H9 -4.3089 4.7393 -5.2129 H 1 LGD 0.1608
57 H10 0.4375 -0.5790 -2.7603 H 1 LGD 0.0832
58 H11 1.4216 0.7190 -2.1155 H 1 LGD 0.0832
59 H12 1.5114 -0.6543 1.4210 H 1 LGD 0.0867
60 H13 1.7732 0.7890 0.4674 H 1 LGD 0.0867
61 H14 -0.1532 1.2822 1.7215 H 1 LGD 0.0781
62 H15 -7.5778 6.7168 -0.3085 H 1 LGD 0.0488
63 H16 -6.7381 6.7656 1.2616 H 1 LGD 0.0488
64 H17 -6.1159 7.7278 -0.1018 H 1 LGD 0.0488
65 H18 -1.5976 1.6625 -4.4919 H 1 LGD 0.4649
66 H19 -3.4265 2.5986 1.3199 H 1 LGD 0.4665
67 H20 1.5202 -2.6816 -2.6368 H 1 LGD 0.0536
68 H21 3.1930 -2.2326 -2.9570 H 1 LGD 0.0536
69 H22 2.8210 -3.5089 -1.7765 H 1 LGD 0.0536
70 H23 4.8344 -2.3323 -1.4293 H 1 LGD 0.3028
71 H24 8.3299 -0.8609 1.1870 H 1 LGD 0.1398
72 H25 10.5110 -1.8658 0.5950 H 1 LGD 0.1431
73 H26 10.6866 -3.4471 -1.3192 H 1 LGD 0.1425
74 H27 8.6606 -4.0194 -2.6458 H 1 LGD 0.1431
75 H28 6.4740 -3.0300 -2.0762 H 1 LGD 0.1398
76 H29 -3.3456 -4.6476 3.3928 H 1 LGD 0.4588
77 H30 -3.3741 -3.5814 4.6449 H 1 LGD 0.4588
78 H31 -0.8032 -4.9069 2.0549 H 1 LGD 0.4283
79 H32 1.7996 -4.2869 3.1228 H 1 LGD 0.0662
80 H33 2.4272 -2.6311 3.0432 H 1 LGD 0.0662
81 H34 1.6773 -3.2235 4.5435 H 1 LGD 0.0662
82 H35 -0.5933 -1.6090 -0.0139 H 1 LGD 0.4219
83 H36 -4.2826 -3.2907 3.2986 H 1 LGD 0.4588
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 7 8 ar
8 8 9 ar
9 9 10 ar
10 10 11 ar
11 11 12 ar
12 7 12 ar
13 10 13 1
14 13 14 1
15 14 15 ar
16 15 16 1
17 11 16 1
18 14 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 15 20 ar
23 18 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 19 24 1
28 12 25 1
29 25 26 1
30 16 27 2
31 13 28 2
32 17 29 1
33 20 30 1
34 24 31 1
35 22 32 1
36 32 33 2
37 32 34 1
38 33 35 1
39 35 36 am
40 36 37 1
41 36 38 2
42 37 39 ar
43 39 40 ar
44 40 41 ar
45 41 42 ar
46 42 43 ar
47 37 43 ar
48 1 31 1
49 5 44 1
50 4 45 1
51 3 46 1
52 22 47 1
53 1 48 1
54 3 49 1
55 4 50 1
56 5 51 1
57 6 52 1
58 6 53 1
59 7 54 1
60 8 55 1
61 9 56 1
62 21 57 1
63 21 58 1
64 23 59 1
65 23 60 1
66 24 61 1
67 26 62 1
68 26 63 1
69 26 64 1
70 29 65 1
71 30 66 1
72 34 67 1
73 34 68 1
74 34 69 1
75 35 70 1
76 39 71 1
77 40 72 1
78 41 73 1
79 42 74 1
80 43 75 1
81 44 76 1
82 44 77 1
83 45 78 1
84 46 79 1
85 46 80 1
86 46 81 1
87 47 82 1
88 44 83 1