@COMMENT
LIGANDBOX_ID = D06386-05
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D06386
NAME = Zorubicin_hydrochloride_(USAN)
MOLECULAR_FORMULA = C34H35N3O10
MOLECULAR_WEIGHT = 645.665
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 7
NUM_OF_ACCEPTOR = 11
NUM_OF_CHIRAL_ATOMS = 6
TPSA = 210.2300
HOMO = -10.8120
LUMO = -3.7109
mLOGPA = -6.794
mLOGD = 1.519
mLOGS = -1.432
@MOLECULE
D06386-05
83 88 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.1480 -0.7320 3.0261 C.3 1 LGD 0.3366
2 O1 0.0427 -1.4219 3.4780 O.3 1 LGD -0.4217
3 C2 0.2090 -2.7813 3.0138 C.3 1 LGD 0.0999
4 C3 -0.9585 -3.6389 3.5772 C.3 1 LGD 0.1057
5 C4 -2.3228 -3.0443 3.1411 C.3 1 LGD 0.0783
6 C5 -2.4036 -1.5292 3.4734 C.3 1 LGD -0.1339
7 C6 -5.8741 6.2131 -2.5233 C.ar 1 LGD -0.1915
8 C7 -5.4834 5.9577 -3.8428 C.ar 1 LGD -0.0706
9 C8 -4.6689 4.8573 -4.1315 C.ar 1 LGD -0.1146
10 C9 -4.2394 3.9964 -3.1027 C.ar 1 LGD -0.1020
11 C10 -4.6447 4.2322 -1.7723 C.ar 1 LGD -0.1628
12 C11 -5.4598 5.3572 -1.4795 C.ar 1 LGD 0.2038
13 C12 -3.3517 2.8313 -3.4345 C.2 1 LGD 0.6035
14 C13 -2.5719 2.1981 -2.3020 C.ar 1 LGD -0.1758
15 C14 -2.9864 2.4183 -0.9696 C.ar 1 LGD -0.1900
16 C15 -4.2133 3.2639 -0.6986 C.2 1 LGD 0.6106
17 C16 -1.4269 1.4010 -2.5539 C.ar 1 LGD 0.1543
18 C17 -0.6982 0.8186 -1.4932 C.ar 1 LGD -0.0438
19 C18 -1.1089 1.0494 -0.1594 C.ar 1 LGD -0.1119
20 C19 -2.2491 1.8418 0.0934 C.ar 1 LGD 0.1615
21 C20 0.5569 -0.0168 -1.8113 C.3 1 LGD -0.0520
22 C21 1.0286 -0.9436 -0.6611 C.3 1 LGD 0.1561
23 C22 1.0525 -0.1033 0.6486 C.3 1 LGD -0.1356
24 C23 -0.3446 0.4484 1.0286 C.3 1 LGD 0.2141
25 O2 -5.8198 5.6160 -0.1683 O.3 1 LGD -0.3360
26 C24 -6.6470 6.7239 0.2281 C.3 1 LGD 0.1364
27 O3 -4.8587 3.1251 0.3278 O.2 1 LGD -0.5223
28 O4 -3.2777 2.4174 -4.5805 O.2 1 LGD -0.5223
29 O5 -0.9963 1.2045 -3.8382 O.3 1 LGD -0.5005
30 O6 -2.6266 2.0640 1.3907 O.3 1 LGD -0.5249
31 O7 -1.1526 -0.6162 1.5856 O.3 1 LGD -0.5135
32 C25 2.4115 -1.5438 -0.9881 C.2 1 LGD 0.3171
33 N1 3.4793 -1.1688 -0.3661 N.2 1 LGD -0.4086
34 C26 2.4395 -2.5920 -2.1040 C.3 1 LGD -0.1698
35 N2 4.7045 -1.6937 -0.6519 N.am 1 LGD -0.3493
36 C27 5.8526 -1.3015 0.0251 C.2 1 LGD 0.6980
37 C28 7.1790 -1.9203 -0.3446 C.ar 1 LGD -0.1480
38 O8 5.7693 -0.4633 0.9093 O.2 1 LGD -0.5453
39 C29 8.3349 -1.6040 0.4008 C.ar 1 LGD -0.0862
40 C30 9.5754 -2.1731 0.0714 C.ar 1 LGD -0.1343
41 C31 9.6768 -3.0632 -1.0075 C.ar 1 LGD -0.0949
42 C32 8.5357 -3.3837 -1.7576 C.ar 1 LGD -0.1343
43 C33 7.2928 -2.8173 -1.4301 C.ar 1 LGD -0.0862
44 N3 -2.5049 -3.2328 1.6887 N.4 1 LGD -0.8190
45 O9 -0.9032 -3.6867 5.0024 O.3 1 LGD -0.5549
46 C34 1.6042 -3.2758 3.4577 C.3 1 LGD -0.0851
47 O10 0.0757 -1.9961 -0.5031 O.3 1 LGD -0.6218
48 H1 -1.1851 0.2696 3.4716 H 1 LGD 0.1267
49 H2 0.1774 -2.8132 1.9196 H 1 LGD 0.0529
50 H3 -0.8763 -4.6590 3.1806 H 1 LGD 0.0872
51 H4 -3.1269 -3.5722 3.6583 H 1 LGD 0.1217
52 H5 -3.3015 -1.0915 3.0184 H 1 LGD 0.1001
53 H6 -2.5233 -1.4089 4.5575 H 1 LGD 0.1001
54 H7 -6.4968 7.0804 -2.3288 H 1 LGD 0.1528
55 H8 -5.8058 6.6189 -4.6424 H 1 LGD 0.1534
56 H9 -4.3652 4.6804 -5.1598 H 1 LGD 0.1612
57 H10 0.3873 -0.6303 -2.7052 H 1 LGD 0.0859
58 H11 1.3743 0.6695 -2.0682 H 1 LGD 0.0859
59 H12 1.4717 -0.6894 1.4740 H 1 LGD 0.0909
60 H13 1.7293 0.7510 0.5138 H 1 LGD 0.0909
61 H14 -0.2006 1.2366 1.7794 H 1 LGD 0.0864
62 H15 -7.6324 6.6537 -0.2493 H 1 LGD 0.0500
63 H16 -6.7850 6.7137 1.3163 H 1 LGD 0.0500
64 H17 -6.1749 7.6733 -0.0542 H 1 LGD 0.0500
65 H18 -1.6536 1.6050 -4.4389 H 1 LGD 0.4666
66 H19 -3.4723 2.5519 1.3748 H 1 LGD 0.4694
67 H20 1.4578 -2.7432 -2.5689 H 1 LGD 0.0538
68 H21 3.1274 -2.2928 -2.9049 H 1 LGD 0.0538
69 H22 2.7671 -3.5647 -1.7161 H 1 LGD 0.0538
70 H23 4.7824 -2.3942 -1.3737 H 1 LGD 0.3044
71 H24 8.2763 -0.9172 1.2408 H 1 LGD 0.1395
72 H25 10.4580 -1.9234 0.6535 H 1 LGD 0.1442
73 H26 10.6371 -3.5028 -1.2620 H 1 LGD 0.1437
74 H27 8.6140 -4.0718 -2.5945 H 1 LGD 0.1442
75 H28 6.4267 -3.0808 -2.0295 H 1 LGD 0.1395
76 H29 -3.4043 -2.8673 1.4091 H 1 LGD 0.4614
77 H30 -1.7806 -2.7306 1.1957 H 1 LGD 0.4614
78 H31 -0.5419 -2.8328 5.3012 H 1 LGD 0.4369
79 H32 1.7461 -4.3288 3.1840 H 1 LGD 0.0678
80 H33 2.3912 -2.6906 2.9653 H 1 LGD 0.0678
81 H34 1.7372 -3.1808 4.5427 H 1 LGD 0.0678
82 H35 -0.6619 -1.5965 -0.0076 H 1 LGD 0.4040
83 H36 -2.4548 -4.2150 1.4574 H 1 LGD 0.4614
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 7 8 ar
8 8 9 ar
9 9 10 ar
10 10 11 ar
11 11 12 ar
12 7 12 ar
13 10 13 1
14 13 14 1
15 14 15 ar
16 15 16 1
17 11 16 1
18 14 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 15 20 ar
23 18 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 19 24 1
28 12 25 1
29 25 26 1
30 16 27 2
31 13 28 2
32 17 29 1
33 20 30 1
34 24 31 1
35 22 32 1
36 32 33 2
37 32 34 1
38 33 35 1
39 35 36 am
40 36 37 1
41 36 38 2
42 37 39 ar
43 39 40 ar
44 40 41 ar
45 41 42 ar
46 42 43 ar
47 37 43 ar
48 1 31 1
49 5 44 1
50 4 45 1
51 3 46 1
52 22 47 1
53 1 48 1
54 3 49 1
55 4 50 1
56 5 51 1
57 6 52 1
58 6 53 1
59 7 54 1
60 8 55 1
61 9 56 1
62 21 57 1
63 21 58 1
64 23 59 1
65 23 60 1
66 24 61 1
67 26 62 1
68 26 63 1
69 26 64 1
70 29 65 1
71 30 66 1
72 34 67 1
73 34 68 1
74 34 69 1
75 35 70 1
76 39 71 1
77 40 72 1
78 41 73 1
79 42 74 1
80 43 75 1
81 44 76 1
82 44 77 1
83 45 78 1
84 46 79 1
85 46 80 1
86 46 81 1
87 47 82 1
88 44 83 1