@COMMENT
LIGANDBOX_ID = D06503-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D06503
NAME = Pemetrexed_sodium_hydrate_(JAN)_Pemetrexed_disodium_heptahydrate_Alimta_(TN)
MOLECULAR_FORMULA = C20H19N5O6
MOLECULAR_WEIGHT = 425.401
MOLECULAR_CHARGE = -2
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 192.6300
HOMO = -0.8898
LUMO = 2.8211
mLOGPA = -6.799
mLOGD = -1.552
mLOGS = -1.754
@MOLECULE
D06503-02
50 52 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.8824 -1.1122 1.5910 C.ar 1 LGD -0.1551
2 C2 -1.0397 0.2425 1.9281 C.ar 1 LGD -0.0995
3 C3 -1.4450 1.1551 0.9388 C.ar 1 LGD -0.1551
4 C4 -1.6861 0.7182 -0.3732 C.ar 1 LGD -0.0941
5 C5 -1.5211 -0.6387 -0.7196 C.ar 1 LGD -0.1035
6 C6 -1.1194 -1.5509 0.2794 C.ar 1 LGD -0.0941
7 C7 -0.7257 0.7235 3.3402 C.3 1 LGD -0.0192
8 C8 0.7957 0.7334 3.6176 C.3 1 LGD 0.0007
9 C9 1.5511 1.5194 2.5744 C.ar 1 LGD -0.0941
10 C10 1.6260 2.9289 2.5264 C.ar 1 LGD -0.2650
11 C11 2.3468 3.2653 1.4329 C.ar 1 LGD 0.1896
12 N1 2.7279 2.0944 0.7891 N.ar 1 LGD -0.1731
13 C12 2.2296 0.9970 1.5005 C.ar 1 LGD -0.1010
14 C13 1.0918 3.9911 3.3803 C.2 1 LGD 0.7550
15 N2 1.3836 5.2841 2.9756 N.am 1 LGD -0.5186
16 C14 2.1375 5.5256 1.8269 C.2 1 LGD 0.6818
17 N3 2.6208 4.5546 1.0562 N.2 1 LGD -0.6930
18 N4 2.4019 6.8166 1.4733 N.pl3 1 LGD -0.9385
19 C15 -1.7635 -1.0916 -2.1384 C.2 1 LGD 0.6507
20 N5 -1.4948 -2.4075 -2.4865 N.am 1 LGD -0.5214
21 C16 -1.6567 -2.9241 -3.8575 C.3 1 LGD -0.0137
22 C17 -1.8695 -4.4662 -3.8324 C.3 1 LGD -0.0413
23 C18 -0.6267 -5.3171 -3.4297 C.3 1 LGD -0.2073
24 C19 -0.1627 -5.1512 -1.9719 C.2 1 LGD 0.9410
25 O1 1.0387 -5.1310 -1.7711 O.co2 1 LGD -0.8646
26 O2 -2.1945 -0.3254 -2.9849 O.2 1 LGD -0.6579
27 C20 -0.5013 -2.5004 -4.7915 C.2 1 LGD 0.9410
28 O3 0.5994 -2.3117 -4.3002 O.co2 1 LGD -0.8423
29 O4 -0.7784 -2.3522 -5.9696 O.co2 1 LGD -0.8423
30 O5 -1.0194 -5.0400 -1.1112 O.co2 1 LGD -0.8646
31 O6 0.4326 3.8160 4.3884 O.2 1 LGD -0.6390
32 H1 -0.5642 -1.8269 2.3447 H 1 LGD 0.1152
33 H2 -1.5602 2.2077 1.1818 H 1 LGD 0.1152
34 H3 -1.9916 1.4423 -1.1233 H 1 LGD 0.1656
35 H4 -0.9827 -2.6033 0.0507 H 1 LGD 0.1656
36 H5 -1.1304 1.7312 3.4963 H 1 LGD 0.0373
37 H6 -1.2220 0.0772 4.0752 H 1 LGD 0.0373
38 H7 0.9841 1.1450 4.6168 H 1 LGD 0.0400
39 H8 1.1638 -0.3003 3.6376 H 1 LGD 0.0400
40 H9 3.2688 2.0495 -0.0621 H 1 LGD 0.3129
41 H10 2.3810 -0.0262 1.1817 H 1 LGD 0.2037
42 H11 1.0371 6.0570 3.5205 H 1 LGD 0.3166
43 H12 2.2787 7.5305 2.1742 H 1 LGD 0.4317
44 H13 3.1095 6.9525 0.7674 H 1 LGD 0.4317
45 H14 -1.1544 -3.0388 -1.7742 H 1 LGD 0.3468
46 H15 -2.5686 -2.4836 -4.2800 H 1 LGD 0.0293
47 H16 -2.7115 -4.7064 -3.1703 H 1 LGD 0.0065
48 H17 -2.1818 -4.7807 -4.8363 H 1 LGD 0.0065
49 H18 -0.8649 -6.3778 -3.5787 H 1 LGD 0.0183
50 H19 0.2107 -5.0946 -4.1036 H 1 LGD 0.0183
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 2 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 2
12 11 12 1
13 12 13 1
14 9 13 2
15 10 14 1
16 14 15 am
17 15 16 1
18 16 17 2
19 11 17 1
20 16 18 1
21 5 19 1
22 19 20 am
23 20 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 24 25 1
28 19 26 2
29 21 27 1
30 27 28 1
31 27 29 2
32 24 30 2
33 14 31 2
34 1 32 1
35 3 33 1
36 4 34 1
37 6 35 1
38 7 36 1
39 7 37 1
40 8 38 1
41 8 39 1
42 12 40 1
43 13 41 1
44 15 42 1
45 18 43 1
46 18 44 1
47 20 45 1
48 21 46 1
49 22 47 1
50 22 48 1
51 23 49 1
52 23 50 1