@COMMENT
LIGANDBOX_ID = D06598-08
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D06598
NAME = Gamithromycin_(USAN/INN)
MOLECULAR_FORMULA = C40H76N2O12
MOLECULAR_WEIGHT = 777.050
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 12
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 180.0800
HOMO = -14.9005
LUMO = -5.4961
mLOGD = 0.554
mLOGS = -1.053
mLOGPA = -4.398
@MOLECULE
D06598-08
132 134 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 2.7037 -0.4969 1.1980 C.3 1 LGD 0.1496
2 C2 1.5364 -1.3725 1.8222 C.3 1 LGD -0.0630
3 O1 2.9279 -0.8672 -0.1898 O.3 1 LGD -0.4731
4 C3 2.5907 1.0752 1.3883 C.3 1 LGD 0.1475
5 C4 0.5148 -2.0377 0.8031 C.3 1 LGD 0.1984
6 C5 2.1956 -2.4302 2.7626 C.3 1 LGD -0.1038
7 C6 4.3212 -0.9425 -0.5868 C.3 1 LGD 0.3358
8 C7 1.4060 1.6911 0.5914 C.3 1 LGD -0.1302
9 C8 3.9245 1.7836 1.0111 C.3 1 LGD -0.1008
10 O2 2.3757 1.3464 2.7756 O.3 1 LGD -0.5859
11 O3 -0.1208 -0.9603 0.0644 O.3 1 LGD -0.4451
12 C9 -0.5371 -2.9647 1.5430 C.3 1 LGD -0.1493
13 C10 4.7435 -2.4008 -0.9050 C.3 1 LGD 0.1053
14 O4 4.5893 -0.0769 -1.7161 O.3 1 LGD -0.3944
15 C11 1.2903 3.2422 0.7323 C.3 1 LGD 0.1174
16 C12 -0.9824 -1.2281 -1.0679 C.3 1 LGD 0.3665
17 C13 -1.3364 -2.2367 2.6386 C.2 1 LGD 0.6485
18 C14 -1.4546 -3.8261 0.6383 C.3 1 LGD -0.0905
19 C15 4.1331 -2.9143 -2.2458 C.3 1 LGD 0.0938
20 O5 6.1673 -2.4627 -0.9976 O.3 1 LGD -0.5481
21 C16 4.0362 -0.4094 -3.0105 C.3 1 LGD 0.1424
22 N1 -0.0523 3.6107 1.2647 N.4 1 LGD -0.6752
23 C17 1.6320 3.9710 -0.5989 C.3 1 LGD -0.1115
24 C18 -1.2344 0.1114 -1.8005 C.3 1 LGD -0.0958
25 O6 -0.3371 -2.1326 -1.9936 O.3 1 LGD -0.5043
26 O7 -2.2235 -1.3274 2.1299 O.3 1 LGD -0.4478
27 O8 -1.1783 -2.4549 3.8277 O.2 1 LGD -0.4970
28 C19 4.4132 -1.8698 -3.3779 C.3 1 LGD -0.1200
29 N2 2.6886 -3.2512 -2.0988 N.4 1 LGD -0.6617
30 C20 2.5274 -0.0829 -3.0723 C.3 1 LGD -0.1236
31 C21 -1.1436 3.3595 0.2917 C.3 1 LGD 0.1055
32 C22 -2.0892 -0.0694 -3.0895 C.3 1 LGD 0.1334
33 C23 -1.1128 -2.5026 -3.1674 C.3 1 LGD 0.1547
34 C24 -3.0623 -0.5434 3.0172 C.3 1 LGD 0.1263
35 C25 2.1060 -3.7176 -3.3742 C.3 1 LGD 0.0880
36 C26 2.5006 -4.3781 -1.1588 C.3 1 LGD 0.0880
37 C27 -2.4692 2.8781 0.9611 C.3 1 LGD -0.1164
38 C28 -1.4955 -1.2240 -3.9747 C.3 1 LGD 0.1047
39 C29 -2.2943 -3.4347 -2.7929 C.3 1 LGD -0.1259
40 C30 -3.5197 0.7489 2.2408 C.3 1 LGD 0.1520
41 C31 -4.2285 -1.4446 3.5499 C.3 1 LGD -0.0987
42 C32 -2.2473 1.6056 1.8644 C.3 1 LGD 0.0966
43 C33 -3.2240 4.0374 1.6654 C.3 1 LGD -0.1064
44 O9 -0.3183 -0.7551 -4.6312 O.3 1 LGD -0.6140
45 C34 -4.3265 0.3624 0.9644 C.3 1 LGD -0.0824
46 O10 -4.3733 1.5151 3.0942 O.3 1 LGD -0.5781
47 C35 -4.1772 -1.6415 5.0819 C.3 1 LGD -0.0991
48 O11 -1.5257 1.9549 3.0524 O.3 1 LGD -0.6288
49 C36 -3.5911 -0.2814 -2.7261 C.3 1 LGD -0.1192
50 C37 -0.0943 5.0107 1.7503 C.3 1 LGD 0.0980
51 C38 0.6941 5.1595 3.0703 C.3 1 LGD -0.1040
52 C39 0.4542 6.5396 3.7126 C.3 1 LGD -0.0931
53 O12 -1.9853 1.1906 -3.8134 O.3 1 LGD -0.4582
54 C40 -2.7235 1.3479 -5.0485 C.3 1 LGD 0.1149
55 H1 3.6073 -0.7660 1.7593 H 1 LGD 0.0654
56 H2 0.9410 -0.7232 2.4748 H 1 LGD 0.0704
57 H3 1.0848 -2.6603 0.1086 H 1 LGD 0.0250
58 H4 2.6633 -3.2352 2.1815 H 1 LGD 0.0556
59 H5 2.9678 -1.9742 3.3953 H 1 LGD 0.0556
60 H6 1.4728 -2.8730 3.4565 H 1 LGD 0.0556
61 H7 4.9493 -0.5987 0.2421 H 1 LGD 0.1144
62 H8 1.4849 1.4129 -0.4664 H 1 LGD 0.0784
63 H9 0.4867 1.2323 0.9590 H 1 LGD 0.0784
64 H10 4.0656 1.8181 -0.0746 H 1 LGD 0.0617
65 H11 3.9479 2.8187 1.3743 H 1 LGD 0.0617
66 H12 4.7853 1.2683 1.4555 H 1 LGD 0.0617
67 H13 1.4191 1.2820 2.9424 H 1 LGD 0.4062
68 H14 0.0472 -3.7303 2.0644 H 1 LGD 0.0867
69 H15 4.4278 -3.0386 -0.0722 H 1 LGD 0.0500
70 H16 2.0205 3.5559 1.4789 H 1 LGD 0.1137
71 H17 -1.9334 -1.6351 -0.7221 H 1 LGD 0.0661
72 H18 -2.3550 -3.2901 0.3218 H 1 LGD 0.0513
73 H19 -0.9110 -4.1822 -0.2449 H 1 LGD 0.0513
74 H20 -1.7985 -4.7102 1.1900 H 1 LGD 0.0513
75 H21 4.6414 -3.8413 -2.5171 H 1 LGD 0.0964
76 H22 6.4276 -3.4002 -0.9709 H 1 LGD 0.4278
77 H23 4.5161 0.2425 -3.7517 H 1 LGD 0.1094
78 H24 1.6013 5.0599 -0.4760 H 1 LGD 0.0695
79 H25 2.6450 3.7089 -0.9276 H 1 LGD 0.0695
80 H26 0.9396 3.6945 -1.4034 H 1 LGD 0.0695
81 H27 -1.7416 0.8056 -1.1218 H 1 LGD 0.0587
82 H28 -0.2706 0.5688 -2.0571 H 1 LGD 0.0587
83 H29 5.4895 -1.8872 -3.5914 H 1 LGD 0.0930
84 H30 3.9383 -2.1530 -4.3240 H 1 LGD 0.0930
85 H31 1.9184 -0.7835 -2.4948 H 1 LGD 0.0501
86 H32 2.3366 0.9308 -2.6996 H 1 LGD 0.0501
87 H33 2.1883 -0.1229 -4.1136 H 1 LGD 0.0501
88 H34 -1.3191 4.2602 -0.2993 H 1 LGD 0.0980
89 H35 -0.8115 2.5743 -0.3890 H 1 LGD 0.0980
90 H36 -0.4748 -3.0989 -3.8294 H 1 LGD 0.0774
91 H37 -2.4619 -0.2200 3.8772 H 1 LGD 0.0698
92 H38 2.7335 -4.5027 -3.8000 H 1 LGD 0.0986
93 H39 1.1071 -4.1166 -3.1925 H 1 LGD 0.0986
94 H40 2.0337 -2.8849 -4.0758 H 1 LGD 0.0986
95 H41 1.4451 -4.6560 -1.1317 H 1 LGD 0.0986
96 H42 3.0919 -5.2346 -1.4878 H 1 LGD 0.0986
97 H43 2.8111 -4.0848 -0.1553 H 1 LGD 0.0986
98 H44 -3.0940 2.5859 0.1104 H 1 LGD 0.0970
99 H45 -2.2345 -1.5047 -4.7358 H 1 LGD 0.0717
100 H46 -2.9154 -3.6360 -3.6746 H 1 LGD 0.0562
101 H47 -1.9145 -4.3990 -2.4339 H 1 LGD 0.0562
102 H48 -2.9413 -3.0208 -2.0152 H 1 LGD 0.0562
103 H49 -5.2049 -1.0092 3.3069 H 1 LGD 0.0629
104 H50 -4.2025 -2.4268 3.0603 H 1 LGD 0.0629
105 H51 -1.6154 0.9374 1.2707 H 1 LGD 0.0894
106 H52 -4.2822 3.7872 1.8069 H 1 LGD 0.0595
107 H53 -2.7941 4.2700 2.6471 H 1 LGD 0.0595
108 H54 -3.1880 4.9477 1.0536 H 1 LGD 0.0595
109 H55 -0.4016 0.2150 -4.6754 H 1 LGD 0.4335
110 H56 -4.8023 1.2383 0.5074 H 1 LGD 0.0539
111 H57 -3.6669 -0.0952 0.2198 H 1 LGD 0.0539
112 H58 -5.1258 -0.3555 1.1794 H 1 LGD 0.0539
113 H59 -3.9911 1.4877 3.9885 H 1 LGD 0.4156
114 H60 -4.2337 -0.6757 5.5997 H 1 LGD 0.0493
115 H61 -5.0224 -2.2558 5.4169 H 1 LGD 0.0493
116 H62 -3.2528 -2.1435 5.3908 H 1 LGD 0.0493
117 H63 -2.0659 2.6070 3.5331 H 1 LGD 0.4290
118 H64 -4.1585 -0.6622 -3.5847 H 1 LGD 0.0547
119 H65 -3.7221 -0.9927 -1.9059 H 1 LGD 0.0547
120 H66 -4.0497 0.6638 -2.4081 H 1 LGD 0.0547
121 H67 0.3040 5.6834 0.9898 H 1 LGD 0.1011
122 H68 -1.1308 5.2888 1.9371 H 1 LGD 0.1011
123 H69 0.3849 4.3765 3.7745 H 1 LGD 0.0606
124 H70 1.7678 5.0281 2.8880 H 1 LGD 0.0606
125 H71 -0.6073 6.6753 3.9567 H 1 LGD 0.0596
126 H72 1.0324 6.6387 4.6399 H 1 LGD 0.0596
127 H73 0.7575 7.3455 3.0323 H 1 LGD 0.0596
128 H74 -3.8043 1.3124 -4.8654 H 1 LGD 0.0514
129 H75 -2.4870 2.3206 -5.4968 H 1 LGD 0.0514
130 H76 -2.4582 0.5656 -5.7699 H 1 LGD 0.0514
131 H77 -0.2305 3.0096 2.0591 H 1 LGD 0.4634
132 H78 2.1770 -2.4411 -1.7663 H 1 LGD 0.4844
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 1
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 4 10 1
10 5 11 1
11 5 12 1
12 7 13 1
13 7 14 1
14 8 15 1
15 11 16 1
16 12 17 1
17 12 18 1
18 13 19 1
19 13 20 1
20 14 21 1
21 15 22 1
22 15 23 1
23 16 24 1
24 16 25 1
25 17 26 1
26 17 27 2
27 19 28 1
28 19 29 1
29 21 30 1
30 22 31 1
31 24 32 1
32 25 33 1
33 26 34 1
34 29 35 1
35 29 36 1
36 31 37 1
37 32 38 1
38 33 39 1
39 34 40 1
40 34 41 1
41 37 42 1
42 37 43 1
43 38 44 1
44 40 45 1
45 40 46 1
46 41 47 1
47 42 48 1
48 21 28 1
49 33 38 1
50 40 42 1
51 32 49 1
52 22 50 1
53 50 51 1
54 51 52 1
55 32 53 1
56 53 54 1
57 1 55 1
58 2 56 1
59 5 57 1
60 6 58 1
61 6 59 1
62 6 60 1
63 7 61 1
64 8 62 1
65 8 63 1
66 9 64 1
67 9 65 1
68 9 66 1
69 10 67 1
70 12 68 1
71 13 69 1
72 15 70 1
73 16 71 1
74 18 72 1
75 18 73 1
76 18 74 1
77 19 75 1
78 20 76 1
79 21 77 1
80 23 78 1
81 23 79 1
82 23 80 1
83 24 81 1
84 24 82 1
85 28 83 1
86 28 84 1
87 30 85 1
88 30 86 1
89 30 87 1
90 31 88 1
91 31 89 1
92 33 90 1
93 34 91 1
94 35 92 1
95 35 93 1
96 35 94 1
97 36 95 1
98 36 96 1
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100 37 98 1
101 38 99 1
102 39 100 1
103 39 101 1
104 39 102 1
105 41 103 1
106 41 104 1
107 42 105 1
108 43 106 1
109 43 107 1
110 43 108 1
111 44 109 1
112 45 110 1
113 45 111 1
114 45 112 1
115 46 113 1
116 47 114 1
117 47 115 1
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119 48 117 1
120 49 118 1
121 49 119 1
122 49 120 1
123 50 121 1
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128 52 126 1
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133 22 131 1
134 29 132 1