@COMMENT
LIGANDBOX_ID = D07233-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D07233
NAME = Penimepicycline_(INN)
MOLECULAR_FORMULA = C29H38N4O9
MOLECULAR_WEIGHT = 586.642
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 7
NUM_OF_ACCEPTOR = 9
NUM_OF_CHIRAL_ATOMS = 5
TPSA = 194.3400
HOMO = -13.6086
LUMO = -9.7987
mLOGD = -0.187
mLOGPA = -4.847
mLOGS = -0.225
@MOLECULE
D07233-02
83 87 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 6.3443 3.0533 4.0211 C.ar 1 LGD -0.0449
2 C2 6.4550 3.7005 2.7873 C.ar 1 LGD -0.1564
3 C3 5.3188 3.9068 1.9925 C.ar 1 LGD 0.2089
4 C4 4.0442 3.4496 2.4224 C.ar 1 LGD -0.2668
5 C5 3.9412 2.7689 3.6631 C.ar 1 LGD -0.0541
6 C6 5.0966 2.5942 4.4587 C.ar 1 LGD -0.1632
7 C7 2.7937 3.7013 1.5951 C.2 1 LGD 0.6018
8 C8 1.5703 2.8514 1.8630 C.2 1 LGD -0.1854
9 C9 1.7852 1.7273 2.8984 C.3 1 LGD 0.0142
10 C10 2.5740 2.2519 4.1393 C.3 1 LGD 0.2176
11 C11 0.3811 3.0357 1.2063 C.2 1 LGD 0.0772
12 C12 -0.8652 2.1724 1.4810 C.3 1 LGD 0.0714
13 C13 -0.3882 0.7879 2.0013 C.3 1 LGD -0.0810
14 C14 0.4770 0.9600 3.2632 C.3 1 LGD -0.0707
15 C15 -1.8105 1.9896 0.2534 C.2 1 LGD 0.5342
16 C16 -2.1186 0.5876 -0.2217 C.2 1 LGD -0.2441
17 C17 -2.0524 -0.4358 0.6832 C.2 1 LGD 0.1242
18 C18 -1.5483 -0.2345 2.1078 C.3 1 LGD 0.1216
19 O1 5.4820 4.5491 0.7988 O.3 1 LGD -0.4839
20 O2 0.1832 4.0213 0.3138 O.3 1 LGD -0.4353
21 O3 2.7928 4.5838 0.7527 O.2 1 LGD -0.5067
22 O4 -2.2801 2.9633 -0.3129 O.2 1 LGD -0.4158
23 C19 -2.5592 0.3804 -1.6540 C.2 1 LGD 0.6792
24 N1 -3.0618 -0.8385 -2.0805 N.am 1 LGD -0.6183
25 O5 -2.3109 -1.7245 0.4066 O.3 1 LGD -0.5093
26 O6 -2.4660 1.2652 -2.4877 O.2 1 LGD -0.5019
27 C20 -3.2904 -1.1359 -3.4960 C.3 1 LGD 0.2936
28 N2 -2.0684 -1.7518 -4.0491 N.4 1 LGD -0.7106
29 C21 -1.8484 -3.0908 -3.4532 C.3 1 LGD 0.0846
30 C22 -0.5585 -3.7075 -4.0340 C.3 1 LGD 0.0880
31 N3 -0.6846 -3.8196 -5.5068 N.4 1 LGD -0.6776
32 C23 -0.9002 -2.4798 -6.1014 C.3 1 LGD 0.0880
33 C24 -2.1886 -1.8512 -5.5209 C.3 1 LGD 0.0846
34 C25 0.5284 -4.4111 -6.1232 C.3 1 LGD 0.0958
35 C26 0.6941 -5.9147 -5.7892 C.3 1 LGD 0.1162
36 O7 1.2603 -6.0910 -4.4927 O.3 1 LGD -0.6306
37 N4 -2.6067 0.2222 3.0510 N.4 1 LGD -0.6728
38 C27 -2.3463 -0.3086 4.4061 C.3 1 LGD 0.0837
39 C28 -3.9791 -0.1893 2.6792 C.3 1 LGD 0.0837
40 O8 -1.6389 2.8452 2.4839 O.3 1 LGD -0.6138
41 C29 1.8304 3.3946 4.8859 C.3 1 LGD -0.1243
42 O9 2.7430 1.1642 5.0521 O.3 1 LGD -0.6129
43 H1 7.2259 2.9059 4.6388 H 1 LGD 0.1618
44 H2 7.4252 4.0527 2.4479 H 1 LGD 0.1735
45 H3 5.0415 2.0998 5.4236 H 1 LGD 0.1404
46 H4 2.4340 0.9858 2.4120 H 1 LGD 0.0776
47 H5 0.2861 0.3739 1.2375 H 1 LGD 0.1024
48 H6 0.7304 -0.0260 3.6737 H 1 LGD 0.0719
49 H7 -0.0863 1.4910 4.0381 H 1 LGD 0.0719
50 H8 -1.1474 -1.1799 2.4783 H 1 LGD 0.1196
51 H9 4.5951 4.6973 0.4195 H 1 LGD 0.4551
52 H10 -0.7240 3.9429 -0.0333 H 1 LGD 0.4360
53 H11 -3.1912 -1.5684 -1.3947 H 1 LGD 0.3467
54 H12 -2.1677 -2.2446 1.2170 H 1 LGD 0.4709
55 H13 -3.5088 -0.2076 -4.0294 H 1 LGD 0.1441
56 H14 -4.1365 -1.8183 -3.6014 H 1 LGD 0.1441
57 H15 -2.7016 -3.7328 -3.6804 H 1 LGD 0.1390
58 H16 -1.7554 -2.9974 -2.3694 H 1 LGD 0.1390
59 H17 -0.4069 -4.6985 -3.6029 H 1 LGD 0.1485
60 H18 0.3013 -3.0813 -3.7888 H 1 LGD 0.1485
61 H19 -0.9913 -2.5736 -7.1856 H 1 LGD 0.1485
62 H20 -0.0428 -1.8427 -5.8751 H 1 LGD 0.1485
63 H21 -3.0507 -2.4713 -5.7741 H 1 LGD 0.1390
64 H22 -2.3352 -0.8538 -5.9414 H 1 LGD 0.1390
65 H23 1.4140 -3.8582 -5.8039 H 1 LGD 0.1294
66 H24 0.4367 -4.3132 -7.2067 H 1 LGD 0.1294
67 H25 1.3581 -6.3648 -6.5379 H 1 LGD 0.0815
68 H26 -0.2777 -6.4199 -5.8573 H 1 LGD 0.0815
69 H27 1.5125 -7.0278 -4.4033 H 1 LGD 0.4730
70 H28 -3.0998 0.0701 5.0992 H 1 LGD 0.1092
71 H29 -1.3592 0.0025 4.7493 H 1 LGD 0.1092
72 H30 -2.3912 -1.3992 4.3877 H 1 LGD 0.1092
73 H31 -4.6849 0.1698 3.4307 H 1 LGD 0.1092
74 H32 -4.0362 -1.2777 2.6216 H 1 LGD 0.1092
75 H33 -4.2429 0.2398 1.7107 H 1 LGD 0.1092
76 H34 -1.8983 3.7127 2.1242 H 1 LGD 0.4731
77 H35 0.8776 3.0554 5.3089 H 1 LGD 0.0557
78 H36 1.6220 4.2398 4.2182 H 1 LGD 0.0557
79 H37 2.4442 3.7752 5.7123 H 1 LGD 0.0557
80 H38 3.1458 1.5272 5.8598 H 1 LGD 0.4364
81 H39 -1.2847 -1.1534 -3.8225 H 1 LGD 0.4650
82 H40 -1.4788 -4.4066 -5.7269 H 1 LGD 0.4609
83 H41 -2.5753 1.2348 3.0849 H 1 LGD 0.4934
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 4 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 5 10 1
12 8 11 2
13 11 12 1
14 12 13 1
15 13 14 1
16 9 14 1
17 12 15 1
18 15 16 1
19 16 17 2
20 17 18 1
21 13 18 1
22 3 19 1
23 11 20 1
24 7 21 2
25 15 22 2
26 16 23 1
27 23 24 am
28 17 25 1
29 23 26 2
30 24 27 1
31 27 28 1
32 28 29 1
33 29 30 1
34 30 31 1
35 31 32 1
36 32 33 1
37 28 33 1
38 31 34 1
39 34 35 1
40 35 36 1
41 18 37 1
42 37 38 1
43 37 39 1
44 12 40 1
45 10 41 1
46 10 42 1
47 1 43 1
48 2 44 1
49 6 45 1
50 9 46 1
51 13 47 1
52 14 48 1
53 14 49 1
54 18 50 1
55 19 51 1
56 20 52 1
57 24 53 1
58 25 54 1
59 27 55 1
60 27 56 1
61 29 57 1
62 29 58 1
63 30 59 1
64 30 60 1
65 32 61 1
66 32 62 1
67 33 63 1
68 33 64 1
69 34 65 1
70 34 66 1
71 35 67 1
72 35 68 1
73 36 69 1
74 38 70 1
75 38 71 1
76 38 72 1
77 39 73 1
78 39 74 1
79 39 75 1
80 40 76 1
81 41 77 1
82 41 78 1
83 41 79 1
84 42 80 1
85 28 81 1
86 31 82 1
87 37 83 1