@COMMENT
LIGANDBOX_ID = D07811-08
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D07811
NAME = Dibekacin_(INN)
MOLECULAR_FORMULA = C18H37N5O8
MOLECULAR_WEIGHT = 451.521
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 14
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 13
TPSA = 247.9400
HOMO = -22.0975
LUMO = -14.6706
mLOGPA = -5.751
mLOGD = -3.377
mLOGS = 6.102
@MOLECULE
D07811-08
73 75 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.9628 0.2221 1.9931 C.3 1 LGD 0.0886
2 C2 -2.9439 -1.2177 2.5799 C.3 1 LGD 0.0806
3 C3 -1.4887 -1.7380 2.7167 C.3 1 LGD 0.0909
4 C4 -0.6066 -0.7241 3.4864 C.3 1 LGD 0.0983
5 C5 -0.7361 0.7021 2.8923 C.3 1 LGD 0.3325
6 O1 -2.1319 1.0617 2.8264 O.3 1 LGD -0.3805
7 N1 -1.4970 -3.0431 3.4067 N.4 1 LGD -0.8237
8 O2 -3.6858 -2.1053 1.7421 O.3 1 LGD -0.6432
9 O3 0.7638 -1.1324 3.4765 O.3 1 LGD -0.6262
10 O4 -0.1585 0.7557 1.5632 O.3 1 LGD -0.4804
11 C6 0.3355 2.0598 1.1744 C.3 1 LGD 0.1157
12 C7 1.8530 2.1727 1.5259 C.3 1 LGD 0.0894
13 C8 2.7061 1.2121 0.6635 C.3 1 LGD -0.1278
14 C9 2.5162 1.4713 -0.8499 C.3 1 LGD 0.1338
15 C10 1.0207 1.4270 -1.2672 C.3 1 LGD 0.1289
16 C11 0.0827 2.2773 -0.3486 C.3 1 LGD 0.1300
17 N2 2.1120 1.8812 2.9489 N.4 1 LGD -0.8226
18 N3 3.0798 2.7919 -1.1955 N.4 1 LGD -0.8292
19 O5 0.6079 0.0469 -1.2385 O.3 1 LGD -0.4654
20 O6 0.2896 3.6604 -0.6446 O.3 1 LGD -0.6225
21 C12 -0.3697 -0.3141 -2.2401 C.3 1 LGD 0.3330
22 O7 0.2606 -0.3413 -3.5441 O.3 1 LGD -0.4342
23 C13 1.3831 -1.2446 -3.6892 C.3 1 LGD 0.1075
24 C14 0.8836 -2.6906 -3.4471 C.3 1 LGD -0.0941
25 C15 0.1740 -2.8109 -2.0785 C.3 1 LGD -0.0997
26 C16 -0.9263 -1.7305 -1.9368 C.3 1 LGD 0.0914
27 C17 1.9545 -1.0696 -5.1127 C.3 1 LGD 0.1113
28 N4 2.4216 0.3194 -5.2935 N.4 1 LGD -0.8203
29 N5 -1.4794 -1.7642 -0.5705 N.4 1 LGD -0.8262
30 C18 -4.3815 0.8410 1.9784 C.3 1 LGD 0.1448
31 O8 -4.3373 2.1692 1.4620 O.3 1 LGD -0.5486
32 H1 -2.5736 0.2072 0.9672 H 1 LGD 0.0155
33 H2 -3.3975 -1.1886 3.5799 H 1 LGD 0.1167
34 H3 -1.0674 -1.8785 1.7222 H 1 LGD 0.0602
35 H4 -0.9617 -0.6759 4.5242 H 1 LGD 0.1238
36 H5 -0.2230 1.4057 3.5562 H 1 LGD 0.0970
37 H6 -1.8371 -2.9366 4.3523 H 1 LGD 0.4851
38 H7 -2.1083 -3.6782 2.9114 H 1 LGD 0.4851
39 H8 -4.6079 -2.1149 2.0584 H 1 LGD 0.5030
40 H9 0.9210 -1.6810 4.2662 H 1 LGD 0.4692
41 H10 -0.2172 2.8376 1.7187 H 1 LGD 0.1233
42 H11 2.1730 3.1973 1.3233 H 1 LGD 0.1278
43 H12 3.7675 1.3178 0.9229 H 1 LGD 0.1177
44 H13 2.4326 0.1722 0.8873 H 1 LGD 0.1177
45 H14 3.0625 0.7095 -1.4103 H 1 LGD 0.1297
46 H15 0.9478 1.8058 -2.2955 H 1 LGD 0.0907
47 H16 -0.9602 2.0168 -0.5710 H 1 LGD 0.1011
48 H17 1.8213 0.9343 3.1567 H 1 LGD 0.4838
49 H18 3.0991 1.9731 3.1463 H 1 LGD 0.4838
50 H19 4.0335 2.8638 -0.8685 H 1 LGD 0.4837
51 H20 2.5167 3.5195 -0.7737 H 1 LGD 0.4837
52 H21 -0.5793 4.1029 -0.6313 H 1 LGD 0.4998
53 H22 -1.1907 0.4128 -2.2411 H 1 LGD 0.1260
54 H23 2.1652 -1.0002 -2.9588 H 1 LGD 0.0447
55 H24 0.1890 -2.9812 -4.2467 H 1 LGD 0.1225
56 H25 1.7292 -3.3897 -3.4877 H 1 LGD 0.1225
57 H26 -0.2658 -3.8113 -1.9756 H 1 LGD 0.0900
58 H27 0.9146 -2.7004 -1.2751 H 1 LGD 0.0900
59 H28 -1.7234 -1.9510 -2.6509 H 1 LGD 0.1737
60 H29 2.7893 -1.7575 -5.2659 H 1 LGD 0.1592
61 H30 1.1781 -1.2895 -5.8490 H 1 LGD 0.1592
62 H31 1.6518 0.9531 -5.1261 H 1 LGD 0.4680
63 H32 2.7601 0.4491 -6.2376 H 1 LGD 0.4680
64 H33 -0.7620 -1.4777 0.0820 H 1 LGD 0.4670
65 H34 -1.7917 -2.6991 -0.3473 H 1 LGD 0.4670
66 H35 -5.0442 0.2264 1.3564 H 1 LGD 0.1000
67 H36 -4.7891 0.8485 2.9977 H 1 LGD 0.1000
68 H37 -3.8025 2.7008 2.0783 H 1 LGD 0.4241
69 H38 -0.5636 -3.4295 3.4260 H 1 LGD 0.4851
70 H39 1.6021 2.5290 3.5335 H 1 LGD 0.4838
71 H40 3.0642 2.9220 -2.1971 H 1 LGD 0.4837
72 H41 3.1686 0.5178 -4.6435 H 1 LGD 0.4680
73 H42 -2.2636 -1.1312 -0.4974 H 1 LGD 0.4670
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 11 12 1
5 12 13 1
6 13 14 1
7 14 15 1
8 15 16 1
9 11 16 1
10 4 5 1
11 12 17 1
12 5 6 1
13 14 18 1
14 1 6 1
15 15 19 1
16 16 20 1
17 3 7 1
18 19 21 1
19 2 8 1
20 4 9 1
21 21 22 1
22 22 23 1
23 23 24 1
24 24 25 1
25 25 26 1
26 21 26 1
27 5 10 1
28 23 27 1
29 27 28 1
30 10 11 1
31 26 29 1
32 1 30 1
33 30 31 1
34 1 32 1
35 2 33 1
36 3 34 1
37 4 35 1
38 5 36 1
39 7 37 1
40 7 38 1
41 8 39 1
42 9 40 1
43 11 41 1
44 12 42 1
45 13 43 1
46 13 44 1
47 14 45 1
48 15 46 1
49 16 47 1
50 17 48 1
51 17 49 1
52 18 50 1
53 18 51 1
54 20 52 1
55 21 53 1
56 23 54 1
57 24 55 1
58 24 56 1
59 25 57 1
60 25 58 1
61 26 59 1
62 27 60 1
63 27 61 1
64 28 62 1
65 28 63 1
66 29 64 1
67 29 65 1
68 30 66 1
69 30 67 1
70 31 68 1
71 7 69 1
72 17 70 1
73 18 71 1
74 28 72 1
75 29 73 1