@COMMENT
LIGANDBOX_ID = D08013-14
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08013
NAME = Gentamicin_(BAN)_Gentamicin_(TN)
MOLECULAR_FORMULA = C21H43N5O7
MOLECULAR_WEIGHT = 477.603
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 11
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 13
TPSA = 199.7300
HOMO = -22.8469
LUMO = -14.2978
mLOGD = -2.472
mLOGS = 4.775
mLOGPA = -4.415
@MOLECULE
D08013-14
81 83 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.6595 -0.5949 -1.1023 C.3 1 LGD 0.1311
2 C2 0.8843 0.6263 -0.5419 C.3 1 LGD 0.1354
3 O1 1.0402 -1.7794 -0.5536 O.3 1 LGD -0.4925
4 C3 3.1671 -0.5875 -0.7360 C.3 1 LGD 0.1011
5 C4 1.5742 1.9943 -0.8559 C.3 1 LGD 0.0917
6 O2 -0.4367 0.5876 -1.0763 O.3 1 LGD -0.5794
7 C5 1.3328 -3.0250 -1.2195 C.3 1 LGD 0.2933
8 C6 3.8187 0.7530 -1.1417 C.3 1 LGD -0.1366
9 N1 3.3369 -0.8059 0.7157 N.4 1 LGD -0.8258
10 O3 1.0035 3.0581 -0.0446 O.3 1 LGD -0.5147
11 C7 3.0888 1.9610 -0.5075 C.3 1 LGD 0.1084
12 C8 0.7098 -4.1792 -0.3965 C.3 1 LGD 0.1285
13 O4 0.7427 -3.0252 -2.5418 O.3 1 LGD -0.3921
14 C9 -0.2950 3.5954 -0.4033 C.3 1 LGD 0.3300
15 N2 3.7326 3.2040 -0.9696 N.4 1 LGD -0.8133
16 C10 -0.8508 -4.0839 -0.4048 C.3 1 LGD 0.0898
17 O5 1.1415 -5.4336 -0.9262 O.3 1 LGD -0.5343
18 C11 -0.6849 -2.7940 -2.5913 C.3 1 LGD 0.1002
19 O6 -1.3502 2.7785 0.1589 O.3 1 LGD -0.4350
20 C12 -0.4494 5.0311 0.1768 C.3 1 LGD 0.0912
21 C13 -1.4222 -3.9469 -1.8556 C.3 1 LGD 0.0980
22 N3 -1.4545 -5.2531 0.2741 N.4 1 LGD -0.7341
23 C14 -1.3523 2.6253 1.5992 C.3 1 LGD 0.1226
24 C15 -0.4913 5.0178 1.7255 C.3 1 LGD -0.1023
25 N4 0.6572 5.8977 -0.2737 N.4 1 LGD -0.8186
26 C16 -2.9419 -3.6434 -1.8132 C.3 1 LGD -0.1324
27 O7 -1.2249 -5.1653 -2.5793 O.3 1 LGD -0.5941
28 C17 -1.2336 -5.2173 1.7342 C.3 1 LGD 0.0903
29 C18 -1.5609 4.0249 2.2338 C.3 1 LGD -0.0929
30 C19 -2.4517 1.5888 2.0001 C.3 1 LGD 0.1260
31 N5 -2.0734 0.2347 1.5378 N.4 1 LGD -0.7594
32 C20 -3.8490 1.9083 1.4093 C.3 1 LGD -0.1345
33 C21 -1.0645 -0.3829 2.4220 C.3 1 LGD 0.0881
34 H1 1.5616 -0.5882 -2.1965 H 1 LGD 0.1485
35 H2 0.8389 0.5242 0.5491 H 1 LGD 0.0231
36 H3 3.6645 -1.4021 -1.2684 H 1 LGD 0.1770
37 H4 1.4606 2.2234 -1.9240 H 1 LGD 0.1089
38 H5 -0.8463 1.4510 -0.8765 H 1 LGD 0.4457
39 H6 2.4172 -3.1670 -1.2957 H 1 LGD 0.1171
40 H7 4.8753 0.7546 -0.8429 H 1 LGD 0.1374
41 H8 3.8016 0.8432 -2.2362 H 1 LGD 0.1374
42 H9 4.3195 -0.8629 0.9469 H 1 LGD 0.4723
43 H10 2.8853 -1.6723 0.9759 H 1 LGD 0.4723
44 H11 3.1927 1.9018 0.5777 H 1 LGD 0.1087
45 H12 1.0635 -4.0884 0.6379 H 1 LGD 0.0865
46 H13 -0.3936 3.6304 -1.4951 H 1 LGD 0.1296
47 H14 3.2815 3.9946 -0.5344 H 1 LGD 0.4815
48 H15 4.7109 3.2020 -0.7144 H 1 LGD 0.4815
49 H16 -1.1385 -3.1874 0.1475 H 1 LGD 0.0694
50 H17 0.7906 -5.4938 -1.8342 H 1 LGD 0.4685
51 H18 -0.9339 -1.8327 -2.1256 H 1 LGD 0.0938
52 H19 -1.0148 -2.7509 -3.6371 H 1 LGD 0.0938
53 H20 -1.3919 5.4450 -0.1899 H 1 LGD 0.1775
54 H21 -1.0544 -6.0971 -0.1155 H 1 LGD 0.4872
55 H22 -0.3795 2.2429 1.9325 H 1 LGD 0.0437
56 H23 0.4903 4.7303 2.1253 H 1 LGD 0.1012
57 H24 -0.7109 6.0245 2.1040 H 1 LGD 0.1012
58 H25 1.5302 5.5344 0.0785 H 1 LGD 0.4719
59 H26 0.5232 6.8345 0.0828 H 1 LGD 0.4719
60 H27 -3.1461 -2.7591 -1.1958 H 1 LGD 0.0724
61 H28 -3.3318 -3.4467 -2.8203 H 1 LGD 0.0724
62 H29 -3.5063 -4.4856 -1.3932 H 1 LGD 0.0724
63 H30 -1.2317 -4.9506 -3.5293 H 1 LGD 0.4782
64 H31 -1.6396 -4.2907 2.1445 H 1 LGD 0.1078
65 H32 -1.7343 -6.0677 2.2013 H 1 LGD 0.1078
66 H33 -0.1644 -5.2701 1.9474 H 1 LGD 0.1078
67 H34 -2.5553 4.4154 1.9847 H 1 LGD 0.1220
68 H35 -1.5088 3.9509 3.3278 H 1 LGD 0.1220
69 H36 -2.5371 1.5671 3.0890 H 1 LGD 0.1494
70 H37 -1.7188 0.2856 0.5916 H 1 LGD 0.4647
71 H38 -4.2212 2.8776 1.7610 H 1 LGD 0.1025
72 H39 -3.8285 1.9242 0.3123 H 1 LGD 0.1025
73 H40 -4.5776 1.1488 1.7201 H 1 LGD 0.1025
74 H41 -1.4596 -0.4508 3.4376 H 1 LGD 0.0989
75 H42 -0.8270 -1.3851 2.0599 H 1 LGD 0.0989
76 H43 -0.1564 0.2219 2.4280 H 1 LGD 0.0989
77 H44 2.9122 -0.0511 1.2342 H 1 LGD 0.4723
78 H45 3.6535 3.2840 -1.9739 H 1 LGD 0.4815
79 H46 -2.4484 -5.2614 0.0916 H 1 LGD 0.4872
80 H47 0.6838 5.9319 -1.2834 H 1 LGD 0.4719
81 H48 -2.8991 -0.3490 1.5391 H 1 LGD 0.4647
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 1
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 5 10 1
10 5 11 1
11 7 12 1
12 7 13 1
13 10 14 1
14 11 15 1
15 12 16 1
16 12 17 1
17 13 18 1
18 14 19 1
19 14 20 1
20 16 21 1
21 16 22 1
22 19 23 1
23 20 24 1
24 20 25 1
25 21 26 1
26 21 27 1
27 22 28 1
28 23 29 1
29 23 30 1
30 30 31 1
31 30 32 1
32 31 33 1
33 8 11 1
34 18 21 1
35 24 29 1
36 1 34 1
37 2 35 1
38 4 36 1
39 5 37 1
40 6 38 1
41 7 39 1
42 8 40 1
43 8 41 1
44 9 42 1
45 9 43 1
46 11 44 1
47 12 45 1
48 14 46 1
49 15 47 1
50 15 48 1
51 16 49 1
52 17 50 1
53 18 51 1
54 18 52 1
55 20 53 1
56 22 54 1
57 23 55 1
58 24 56 1
59 24 57 1
60 25 58 1
61 25 59 1
62 26 60 1
63 26 61 1
64 26 62 1
65 27 63 1
66 28 64 1
67 28 65 1
68 28 66 1
69 29 67 1
70 29 68 1
71 30 69 1
72 31 70 1
73 32 71 1
74 32 72 1
75 32 73 1
76 33 74 1
77 33 75 1
78 33 76 1
79 9 77 1
80 15 78 1
81 22 79 1
82 25 80 1
83 31 81 1