@COMMENT
LIGANDBOX_ID = D08336-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08336
NAME = Peplomycin_(INN)_PEP
MOLECULAR_FORMULA = C61H88N18O21S2
MOLECULAR_WEIGHT = 1473.610
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 26
NUM_OF_ACCEPTOR = 26
NUM_OF_CHIRAL_ATOMS = 20
TPSA = 639.1000
HOMO = -14.6368
LUMO = -9.9810
mLOGS = -0.529
mLOGD = -2.122
mLOGPA = -8.954
@MOLECULE
D08336-03
193 199 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 4.8834 -4.7258 3.4310 C.3 1 LGD 0.0194
2 C2 3.3912 -4.6911 3.0511 C.2 1 LGD 0.6436
3 N1 2.6291 -3.5800 3.3867 N.am 1 LGD -0.6199
4 C3 5.1338 -4.7517 4.9713 C.3 1 LGD 0.1432
5 O1 6.4888 -5.1186 5.2175 O.3 1 LGD -0.5594
6 C4 4.8386 -3.4203 5.7097 C.3 1 LGD -0.1378
7 O2 2.8751 -5.6088 2.4368 O.2 1 LGD -0.5311
8 C5 1.1886 -3.4868 3.1213 C.3 1 LGD 0.1209
9 C6 1.6701 -1.3909 -2.3040 C.3 1 LGD 0.0272
10 C7 2.6584 -1.9569 -1.2691 C.2 1 LGD 0.6451
11 N2 3.2204 -1.1069 -0.3239 N.am 1 LGD -0.6244
12 O3 2.9493 -3.1406 -1.2603 O.2 1 LGD -0.5222
13 C8 4.2251 -1.5426 0.6545 C.3 1 LGD 0.0794
14 C9 5.6019 -1.7752 -0.0532 C.3 1 LGD 0.1395
15 C10 6.6911 -2.4105 0.8689 C.3 1 LGD -0.1123
16 O4 6.0812 -0.5484 -0.6095 O.3 1 LGD -0.5947
17 C11 6.1608 -3.6981 1.5244 C.2 1 LGD 0.6508
18 N3 5.5986 -3.6054 2.7908 N.am 1 LGD -0.6240
19 O5 6.2373 -4.7837 0.9743 O.2 1 LGD -0.5189
20 C12 8.0071 -2.6904 0.0932 C.3 1 LGD -0.0777
21 C13 4.2845 -0.4847 1.7869 C.3 1 LGD -0.0919
22 N4 -4.2002 0.8751 -0.8249 N.ar 1 LGD -0.7603
23 C14 -4.4484 -0.3320 -1.3557 C.ar 1 LGD 0.7015
24 C15 -3.4099 -1.2081 -1.7615 C.ar 1 LGD -0.2735
25 C16 -2.0819 -0.7154 -1.6348 C.ar 1 LGD 0.4463
26 N5 -1.8548 0.4925 -1.0802 N.ar 1 LGD -0.7937
27 C17 -2.9144 1.2319 -0.7042 C.ar 1 LGD 0.6271
28 C18 -2.6353 2.5539 0.0300 C.3 1 LGD 0.1303
29 N6 -5.7674 -0.6759 -1.4684 N.pl3 1 LGD -0.9315
30 C19 -0.8439 -1.4560 -2.1103 C.2 1 LGD 0.5782
31 N7 -1.2609 2.5236 0.5836 N.4 1 LGD -0.7622
32 C20 -0.9782 3.6073 1.5428 C.3 1 LGD 0.1007
33 C21 0.4235 3.3852 2.1578 C.3 1 LGD 0.0070
34 C22 0.8251 4.5520 3.0753 C.2 1 LGD 0.6222
35 N8 0.4295 2.1217 2.9286 N.4 1 LGD -0.8343
36 N9 2.1252 4.6361 3.5245 N.am 1 LGD -0.6579
37 O6 0.0416 5.4134 3.4291 O.2 1 LGD -0.4897
38 O7 -0.8938 -2.3844 -2.8996 O.2 1 LGD -0.5199
39 N10 0.3983 -1.0216 -1.6545 N.am 1 LGD -0.5739
40 C23 -3.7105 -2.6194 -2.2897 C.3 1 LGD -0.0471
41 C24 -2.8604 3.8110 -0.8655 C.3 1 LGD -0.1864
42 C25 -1.8445 4.0107 -1.9987 C.2 1 LGD 0.6444
43 N11 -1.8891 5.1718 -2.7362 N.am 1 LGD -0.6441
44 O8 -0.9864 3.1974 -2.2828 O.2 1 LGD -0.6289
45 C26 0.9414 -2.7383 1.7959 C.3 1 LGD -0.1520
46 C27 -0.5139 -2.4331 1.6023 C.ar 1 LGD 0.4564
47 S1 -1.6486 -3.5665 0.8599 S.3 1 LGD 0.0070
48 C28 -2.9762 -2.4775 1.2496 C.ar 1 LGD -0.1732
49 C29 -2.4407 -1.3843 1.8771 C.ar 1 LGD 0.2434
50 N12 -1.0897 -1.3436 2.0669 N.ar 1 LGD -0.7265
51 C30 2.2523 -0.1857 -3.1157 C.3 1 LGD 0.1029
52 O9 1.2480 0.3207 -4.0235 O.3 1 LGD -0.4512
53 C31 0.9667 -0.4693 -5.2009 C.3 1 LGD 0.3392
54 O10 2.1532 -0.5501 -6.0294 O.3 1 LGD -0.4482
55 C32 2.6883 0.7182 -6.4825 C.3 1 LGD 0.0513
56 C33 1.6323 1.3955 -7.4022 C.3 1 LGD 0.1058
57 C34 0.2885 1.5706 -6.6454 C.3 1 LGD 0.0901
58 C35 -0.1656 0.2105 -6.0246 C.3 1 LGD 0.1004
59 C36 4.0347 0.4516 -7.1968 C.3 1 LGD 0.1474
60 O11 4.9559 -0.1565 -6.2960 O.3 1 LGD -0.5860
61 O12 1.4173 0.6067 -8.5744 O.3 1 LGD -0.5749
62 O13 0.4284 2.5669 -5.6290 O.3 1 LGD -0.6045
63 O14 -1.3075 0.4090 -5.1596 O.3 1 LGD -0.4671
64 C37 -2.5335 0.8174 -5.8030 C.3 1 LGD 0.3085
65 O15 -2.9607 -0.2061 -6.7401 O.3 1 LGD -0.4102
66 C38 -3.7214 -1.2860 -6.1716 C.3 1 LGD 0.1048
67 C39 -5.1276 -0.7105 -5.7969 C.3 1 LGD 0.0846
68 C40 -5.0378 0.7421 -5.2135 C.3 1 LGD 0.1672
69 C41 -3.6076 1.0295 -4.6961 C.3 1 LGD 0.1393
70 C42 -3.7906 -2.4223 -7.2178 C.3 1 LGD 0.1451
71 O16 -5.7677 -1.5777 -4.8602 O.3 1 LGD -0.6263
72 O17 -5.3324 1.6976 -6.2606 O.3 1 LGD -0.4296
73 O18 -3.4882 2.3298 -4.1237 O.3 1 LGD -0.6011
74 C43 2.7219 0.9792 -2.2709 C.ar 1 LGD 0.3422
75 N13 4.0181 1.3559 -2.1963 N.ar 1 LGD -0.6197
76 C44 4.0382 2.3879 -1.3791 C.ar 1 LGD 0.4411
77 N14 2.7444 2.6622 -0.9253 N.ar 1 LGD -0.3804
78 C45 1.8833 1.7369 -1.5075 C.ar 1 LGD -0.2888
79 S2 -5.1156 -0.3618 2.1762 S.3 1 LGD -0.0215
80 C46 -3.3587 -0.3700 2.3327 C.ar 1 LGD 0.4200
81 C47 -5.1463 1.1606 3.0641 C.ar 1 LGD -0.0733
82 C48 -3.8617 1.4878 3.4234 C.ar 1 LGD 0.2020
83 N15 -2.8666 0.6495 3.0063 N.ar 1 LGD -0.7724
84 C49 -3.5761 2.6647 4.2688 C.2 1 LGD 0.5617
85 N16 -2.2636 2.8409 4.6804 N.am 1 LGD -0.6499
86 O19 -4.4384 3.4437 4.6374 O.2 1 LGD -0.4890
87 C50 -6.6106 1.8390 -6.7207 C.2 1 LGD 0.7522
88 N17 -6.8372 2.7250 -7.7466 N.am 1 LGD -0.6593
89 O20 -7.5644 1.2254 -6.2747 O.2 1 LGD -0.6073
90 O21 -4.4594 -3.5604 -6.6803 O.3 1 LGD -0.5857
91 C51 -1.8750 3.7928 5.7263 C.3 1 LGD 0.0952
92 C52 -2.2621 3.2741 7.1364 C.3 1 LGD -0.1422
93 C53 -1.6217 1.9122 7.4997 C.3 1 LGD 0.1008
94 N18 -2.3109 0.8139 6.7895 N.4 1 LGD -0.7489
95 C54 -1.7126 -0.5005 7.0961 C.3 1 LGD 0.1750
96 C55 -0.2684 -0.5464 6.6033 C.ar 1 LGD -0.1477
97 C56 -2.5767 -1.5948 6.4345 C.3 1 LGD -0.1263
98 C57 0.0448 -0.3212 5.2499 C.ar 1 LGD -0.1171
99 C58 1.3776 -0.3655 4.8145 C.ar 1 LGD -0.1311
100 C59 2.4086 -0.6276 5.7280 C.ar 1 LGD -0.0902
101 C60 2.1032 -0.8584 7.0781 C.ar 1 LGD -0.1311
102 C61 0.7687 -0.8173 7.5141 C.ar 1 LGD -0.1171
103 H1 5.2688 -5.6748 3.0356 H 1 LGD 0.1524
104 H2 3.0804 -2.8211 3.8740 H 1 LGD 0.2951
105 H3 4.4819 -5.5225 5.4021 H 1 LGD 0.1008
106 H4 7.0538 -4.4533 4.7872 H 1 LGD 0.4132
107 H5 3.7714 -3.1777 5.6805 H 1 LGD 0.0344
108 H6 5.1167 -3.5034 6.7680 H 1 LGD 0.0344
109 H7 5.3999 -2.5820 5.2785 H 1 LGD 0.0344
110 H8 0.7316 -4.4839 3.0781 H 1 LGD 0.0604
111 H9 0.7125 -2.9393 3.9440 H 1 LGD 0.0604
112 H10 1.4990 -2.2094 -3.0136 H 1 LGD 0.1406
113 H11 2.9593 -0.1320 -0.3421 H 1 LGD 0.2911
114 H12 3.8798 -2.4891 1.0864 H 1 LGD 0.0862
115 H13 5.4333 -2.4849 -0.8731 H 1 LGD 0.0848
116 H14 6.9277 -1.7041 1.6750 H 1 LGD 0.0463
117 H15 5.3731 -0.1894 -1.1750 H 1 LGD 0.4191
118 H16 5.6059 -2.7074 3.2509 H 1 LGD 0.2909
119 H17 7.8260 -3.3430 -0.7706 H 1 LGD 0.0631
120 H18 8.4570 -1.7587 -0.2722 H 1 LGD 0.0631
121 H19 8.7418 -3.1816 0.7439 H 1 LGD 0.0631
122 H20 3.2911 -0.3280 2.2200 H 1 LGD 0.0230
123 H21 4.9509 -0.8037 2.5969 H 1 LGD 0.0230
124 H22 4.6380 0.4839 1.4116 H 1 LGD 0.0230
125 H23 -3.3263 2.6166 0.8726 H 1 LGD 0.1154
126 H24 -5.9989 -1.6377 -1.6627 H 1 LGD 0.4614
127 H25 -6.4383 -0.0961 -0.9873 H 1 LGD 0.4614
128 H26 -0.6146 2.5666 -0.1954 H 1 LGD 0.4681
129 H27 -1.0053 4.5678 1.0232 H 1 LGD 0.1558
130 H28 -1.7371 3.6136 2.3278 H 1 LGD 0.1558
131 H29 1.1656 3.3240 1.3596 H 1 LGD 0.1332
132 H30 1.3478 1.9645 3.3207 H 1 LGD 0.4744
133 H31 0.1871 1.3357 2.3418 H 1 LGD 0.4744
134 H32 2.8155 3.9586 3.2372 H 1 LGD 0.3561
135 H33 2.3910 5.4029 4.1260 H 1 LGD 0.3561
136 H34 0.4091 -0.2875 -0.9624 H 1 LGD 0.2883
137 H35 -3.0474 -3.3623 -1.8308 H 1 LGD 0.0760
138 H36 -4.7323 -2.9515 -2.0747 H 1 LGD 0.0760
139 H37 -3.5702 -2.6757 -3.3741 H 1 LGD 0.0760
140 H38 -2.8509 4.7129 -0.2414 H 1 LGD 0.1162
141 H39 -3.8618 3.7654 -1.3120 H 1 LGD 0.1162
142 H40 -2.5833 5.8766 -2.5370 H 1 LGD 0.3506
143 H41 -1.2263 5.3075 -3.4856 H 1 LGD 0.3506
144 H42 1.5078 -1.8013 1.7944 H 1 LGD 0.0807
145 H43 1.3154 -3.3429 0.9609 H 1 LGD 0.0807
146 H44 -4.0010 -2.7278 1.0087 H 1 LGD 0.2009
147 H45 3.1175 -0.5456 -3.6872 H 1 LGD 0.1105
148 H46 0.6509 -1.4767 -4.9071 H 1 LGD 0.1049
149 H47 2.8872 1.3729 -5.6241 H 1 LGD 0.0690
150 H48 1.9989 2.3873 -7.6969 H 1 LGD 0.1083
151 H49 -0.4650 1.9028 -7.3706 H 1 LGD 0.0981
152 H50 -0.4374 -0.4752 -6.8371 H 1 LGD 0.0995
153 H51 3.8740 -0.2043 -8.0617 H 1 LGD 0.0731
154 H52 4.4442 1.4006 -7.5652 H 1 LGD 0.0731
155 H53 4.5062 -0.9319 -5.9162 H 1 LGD 0.4079
156 H54 1.4722 -0.3268 -8.3028 H 1 LGD 0.4143
157 H55 0.5378 2.0895 -4.7851 H 1 LGD 0.4219
158 H56 -2.3778 1.7550 -6.3487 H 1 LGD 0.1135
159 H57 -3.2063 -1.6591 -5.2783 H 1 LGD 0.0528
160 H58 -5.7309 -0.6802 -6.7130 H 1 LGD 0.0896
161 H59 -5.7491 0.8662 -4.3862 H 1 LGD 0.0749
162 H60 -3.4074 0.2968 -3.9076 H 1 LGD 0.0329
163 H61 -4.3201 -2.0630 -8.1095 H 1 LGD 0.0689
164 H62 -2.7724 -2.6990 -7.5194 H 1 LGD 0.0689
165 H63 -6.6807 -1.2550 -4.7507 H 1 LGD 0.4342
166 H64 -2.5640 2.4244 -3.8287 H 1 LGD 0.4160
167 H65 4.9042 2.9640 -1.0799 H 1 LGD 0.0909
168 H66 2.4841 3.4176 -0.3082 H 1 LGD 0.2630
169 H67 0.8164 1.7103 -1.3434 H 1 LGD 0.1723
170 H68 -6.0792 1.6609 3.2897 H 1 LGD 0.2325
171 H69 -1.5903 2.1632 4.3649 H 1 LGD 0.2584
172 H70 -6.0677 3.2467 -8.1375 H 1 LGD 0.3447
173 H71 -7.7736 2.8428 -8.1026 H 1 LGD 0.3447
174 H72 -5.1656 -3.2246 -6.0981 H 1 LGD 0.4143
175 H73 -0.7894 3.9462 5.6847 H 1 LGD 0.0871
176 H74 -2.3564 4.7628 5.5454 H 1 LGD 0.0871
177 H75 -1.9347 4.0178 7.8736 H 1 LGD 0.1110
178 H76 -3.3538 3.2089 7.2296 H 1 LGD 0.1110
179 H77 -0.5627 1.9169 7.2336 H 1 LGD 0.1092
180 H78 -1.7109 1.7415 8.5744 H 1 LGD 0.1092
181 H79 -2.2646 0.9773 5.7940 H 1 LGD 0.4484
182 H80 -1.7365 -0.6452 8.1783 H 1 LGD 0.1267
183 H81 -2.6255 -1.4635 5.3463 H 1 LGD 0.0815
184 H82 -2.1598 -2.5886 6.6412 H 1 LGD 0.0815
185 H83 -3.6004 -1.5687 6.8283 H 1 LGD 0.0815
186 H84 -0.7450 -0.1189 4.5355 H 1 LGD 0.1475
187 H85 1.6095 -0.2079 3.7676 H 1 LGD 0.1475
188 H86 3.4408 -0.6573 5.3908 H 1 LGD 0.1618
189 H87 2.8991 -1.0712 7.7864 H 1 LGD 0.1475
190 H88 0.5409 -0.9993 8.5609 H 1 LGD 0.1475
191 H89 -1.1502 1.6282 1.0377 H 1 LGD 0.4681
192 H90 -0.2316 2.1868 3.6870 H 1 LGD 0.4744
193 H91 -3.2827 0.8049 7.0664 H 1 LGD 0.4484
@BOND
1 1 2 1
2 2 3 am
3 1 4 1
4 4 5 1
5 4 6 1
6 2 7 2
7 3 8 1
8 9 10 1
9 10 11 am
10 10 12 2
11 11 13 1
12 13 14 1
13 14 15 1
14 14 16 1
15 15 17 1
16 17 18 am
17 17 19 2
18 15 20 1
19 13 21 1
20 22 23 ar
21 23 24 ar
22 24 25 ar
23 25 26 ar
24 26 27 ar
25 22 27 ar
26 27 28 1
27 23 29 1
28 25 30 1
29 28 31 1
30 31 32 1
31 32 33 1
32 33 34 1
33 33 35 1
34 34 36 am
35 34 37 2
36 30 38 2
37 30 39 am
38 24 40 1
39 41 42 1
40 28 41 1
41 42 43 am
42 42 44 2
43 9 39 1
44 1 18 1
45 8 45 1
46 45 46 1
47 46 47 1
48 47 48 1
49 48 49 2
50 49 50 1
51 46 50 2
52 9 51 1
53 52 53 1
54 53 54 1
55 54 55 1
56 55 56 1
57 56 57 1
58 57 58 1
59 53 58 1
60 55 59 1
61 59 60 1
62 56 61 1
63 57 62 1
64 58 63 1
65 63 64 1
66 64 65 1
67 65 66 1
68 66 67 1
69 67 68 1
70 68 69 1
71 64 69 1
72 66 70 1
73 67 71 1
74 68 72 1
75 69 73 1
76 51 74 1
77 74 75 1
78 75 76 2
79 76 77 1
80 77 78 1
81 74 78 2
82 51 52 1
83 79 80 1
84 49 80 1
85 79 81 1
86 81 82 2
87 82 83 1
88 80 83 2
89 82 84 1
90 84 85 am
91 84 86 2
92 72 87 1
93 87 88 am
94 87 89 2
95 70 90 1
96 85 91 1
97 91 92 1
98 92 93 1
99 93 94 1
100 94 95 1
101 95 96 1
102 95 97 1
103 96 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 101 102 ar
108 96 102 ar
109 1 103 1
110 3 104 1
111 4 105 1
112 5 106 1
113 6 107 1
114 6 108 1
115 6 109 1
116 8 110 1
117 8 111 1
118 9 112 1
119 11 113 1
120 13 114 1
121 14 115 1
122 15 116 1
123 16 117 1
124 18 118 1
125 20 119 1
126 20 120 1
127 20 121 1
128 21 122 1
129 21 123 1
130 21 124 1
131 28 125 1
132 29 126 1
133 29 127 1
134 31 128 1
135 32 129 1
136 32 130 1
137 33 131 1
138 35 132 1
139 35 133 1
140 36 134 1
141 36 135 1
142 39 136 1
143 40 137 1
144 40 138 1
145 40 139 1
146 41 140 1
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148 43 142 1
149 43 143 1
150 45 144 1
151 45 145 1
152 48 146 1
153 51 147 1
154 53 148 1
155 55 149 1
156 56 150 1
157 57 151 1
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159 59 153 1
160 59 154 1
161 60 155 1
162 61 156 1
163 62 157 1
164 64 158 1
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166 67 160 1
167 68 161 1
168 69 162 1
169 70 163 1
170 70 164 1
171 71 165 1
172 73 166 1
173 76 167 1
174 77 168 1
175 78 169 1
176 81 170 1
177 85 171 1
178 88 172 1
179 88 173 1
180 90 174 1
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183 92 177 1
184 92 178 1
185 93 179 1
186 93 180 1
187 94 181 1
188 95 182 1
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190 97 184 1
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192 98 186 1
193 99 187 1
194 100 188 1
195 101 189 1
196 102 190 1
197 31 191 1
198 35 192 1
199 94 193 1