@COMMENT
LIGANDBOX_ID = D08336-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08336
NAME = Peplomycin_(INN)_PEP
MOLECULAR_FORMULA = C61H88N18O21S2
MOLECULAR_WEIGHT = 1473.610
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 26
NUM_OF_ACCEPTOR = 26
NUM_OF_CHIRAL_ATOMS = 20
TPSA = 639.1000
HOMO = -14.6368
LUMO = -9.9810
mLOGS = -0.529
mLOGD = -2.122
mLOGPA = -8.954
@MOLECULE
D08336-04
193 199 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 2.2860 4.9916 0.7378 C.3 1 LGD 0.0666
2 C2 2.0392 6.0915 1.7819 C.2 1 LGD 0.6478
3 N1 1.1748 7.1293 1.4664 N.am 1 LGD -0.5958
4 C3 2.8297 5.5599 -0.6066 C.3 1 LGD 0.1328
5 O1 1.8124 6.2657 -1.3203 O.3 1 LGD -0.6221
6 C4 3.4027 4.4436 -1.5088 C.3 1 LGD -0.1291
7 O2 2.5769 6.0614 2.8760 O.2 1 LGD -0.5662
8 C5 0.8834 8.2334 2.3852 C.3 1 LGD 0.1158
9 C6 -1.1779 -3.3485 -0.5491 C.3 1 LGD 0.0298
10 C7 -1.0733 -1.8149 -0.6457 C.2 1 LGD 0.6541
11 N2 0.0742 -1.1842 -0.1830 N.am 1 LGD -0.6204
12 O3 -1.9730 -1.1488 -1.1282 O.2 1 LGD -0.5390
13 C8 0.2528 0.2743 -0.1610 C.3 1 LGD 0.0892
14 C9 -0.6015 0.8940 1.0006 C.3 1 LGD 0.1512
15 C10 -0.6629 2.4587 0.9991 C.3 1 LGD -0.1089
16 O4 -0.1900 0.3883 2.2722 O.3 1 LGD -0.5786
17 C11 0.6654 3.1664 1.3250 C.2 1 LGD 0.6560
18 N3 1.0481 4.2246 0.5142 N.am 1 LGD -0.6100
19 O5 1.3870 2.8283 2.2487 O.2 1 LGD -0.5649
20 C12 -1.7672 2.9915 1.9464 C.3 1 LGD -0.0847
21 C13 1.7789 0.5338 -0.0645 C.3 1 LGD -0.0943
22 N4 2.6967 -7.3900 -3.7856 N.ar 1 LGD -0.7486
23 C14 1.5462 -7.4238 -4.4774 C.ar 1 LGD 0.7088
24 C15 0.4279 -6.6271 -4.1230 C.ar 1 LGD -0.2572
25 C16 0.5657 -5.8277 -2.9558 C.ar 1 LGD 0.4418
26 N5 1.7361 -5.7948 -2.2854 N.ar 1 LGD -0.8127
27 C17 2.7417 -6.5760 -2.7207 C.ar 1 LGD 0.6177
28 C18 4.0964 -6.4602 -1.9986 C.3 1 LGD 0.1263
29 N6 1.5134 -8.2732 -5.5495 N.pl3 1 LGD -0.9216
30 C19 -0.5511 -4.9893 -2.3595 C.2 1 LGD 0.5879
31 N7 4.1583 -5.1799 -1.2521 N.4 1 LGD -0.7638
32 C20 5.5242 -4.8043 -0.8385 C.3 1 LGD 0.0990
33 C21 5.5217 -3.3464 -0.3170 C.3 1 LGD 0.0052
34 C22 6.8824 -2.9626 0.2872 C.2 1 LGD 0.6225
35 N8 5.1977 -2.4231 -1.4292 N.4 1 LGD -0.8309
36 N9 6.9906 -1.7887 1.0011 N.am 1 LGD -0.6544
37 O6 7.8781 -3.6514 0.1630 O.2 1 LGD -0.4770
38 O7 -1.7290 -5.1873 -2.6077 O.2 1 LGD -0.5251
39 N10 -0.2075 -3.9858 -1.4579 N.am 1 LGD -0.5741
40 C23 -0.8553 -6.6158 -4.9684 C.3 1 LGD -0.0471
41 C24 4.3956 -7.6648 -1.0553 C.3 1 LGD -0.1852
42 C25 3.5452 -7.7300 0.2210 C.2 1 LGD 0.6431
43 N11 3.8887 -8.6281 1.2051 N.am 1 LGD -0.6458
44 O8 2.5803 -7.0175 0.4226 O.2 1 LGD -0.6272
45 C26 -0.3123 7.8729 3.2905 C.3 1 LGD -0.1344
46 C27 -0.7491 9.0636 4.0963 C.ar 1 LGD 0.4484
47 S1 -0.1463 9.4215 5.7206 S.3 1 LGD -0.1434
48 C28 -1.0658 10.9263 5.7221 C.ar 1 LGD -0.1545
49 C29 -1.7209 11.0081 4.5216 C.ar 1 LGD 0.2893
50 N12 -1.5508 9.9937 3.6255 N.ar 1 LGD -0.6314
51 C30 -0.9989 -3.8892 0.9091 C.3 1 LGD 0.1025
52 O9 -1.0498 -5.3340 0.9012 O.3 1 LGD -0.4500
53 C31 -2.3458 -5.9465 0.7190 C.3 1 LGD 0.3395
54 O10 -3.2135 -5.5866 1.8222 O.3 1 LGD -0.4515
55 C32 -2.7399 -5.9639 3.1386 C.3 1 LGD 0.0520
56 C33 -2.6717 -7.5164 3.2072 C.3 1 LGD 0.1062
57 C34 -1.7540 -8.0678 2.0830 C.3 1 LGD 0.0908
58 C35 -2.1905 -7.4955 0.6962 C.3 1 LGD 0.1010
59 C36 -3.6906 -5.3483 4.1923 C.3 1 LGD 0.1472
60 O11 -3.6934 -3.9279 4.0794 O.3 1 LGD -0.5883
61 O12 -3.9796 -8.0754 3.0693 O.3 1 LGD -0.5771
62 O13 -0.3912 -7.7344 2.3597 O.3 1 LGD -0.6047
63 O14 -1.2229 -7.8475 -0.3202 O.3 1 LGD -0.4634
64 C37 -1.1220 -9.2500 -0.6479 C.3 1 LGD 0.3079
65 O15 -2.3913 -9.7244 -1.1693 O.3 1 LGD -0.4135
66 C38 -2.6052 -9.5016 -2.5739 C.3 1 LGD 0.1040
67 C39 -1.6566 -10.4786 -3.3448 C.3 1 LGD 0.0854
68 C40 -0.2595 -10.6216 -2.6479 C.3 1 LGD 0.1669
69 C41 0.0031 -9.4171 -1.7117 C.3 1 LGD 0.1397
70 C42 -4.1019 -9.7499 -2.8716 C.3 1 LGD 0.1459
71 O16 -1.4915 -10.0252 -4.6887 O.3 1 LGD -0.6225
72 O17 -0.2473 -11.8234 -1.8402 O.3 1 LGD -0.4310
73 O18 1.2805 -9.4889 -1.0830 O.3 1 LGD -0.6013
74 C43 0.3004 -3.4927 1.5773 C.ar 1 LGD 0.3418
75 N13 0.3540 -2.6688 2.6474 N.ar 1 LGD -0.6262
76 C44 1.6317 -2.5644 2.9482 C.ar 1 LGD 0.4476
77 N14 2.3949 -3.3257 2.0576 N.ar 1 LGD -0.3804
78 C45 1.5221 -3.9324 1.1592 C.ar 1 LGD -0.2908
79 S2 -2.7969 13.5481 5.3624 S.3 1 LGD -0.1032
80 C46 -2.5354 12.1768 4.2845 C.ar 1 LGD 0.4107
81 C47 -3.8148 14.2786 4.1185 C.ar 1 LGD -0.0879
82 C48 -3.8655 13.4350 3.0354 C.ar 1 LGD 0.2463
83 N15 -3.1540 12.2737 3.1260 N.ar 1 LGD -0.6667
84 C49 -4.6317 13.7833 1.8183 C.2 1 LGD 0.5791
85 N16 -4.6500 12.8602 0.7808 N.am 1 LGD -0.6274
86 O19 -5.2206 14.8441 1.6911 O.2 1 LGD -0.5510
87 C50 -0.1998 -13.0513 -2.4364 C.2 1 LGD 0.7524
88 N17 -0.2310 -14.1654 -1.6323 N.am 1 LGD -0.6615
89 O20 -0.1304 -13.2187 -3.6416 O.2 1 LGD -0.6047
90 O21 -4.3976 -9.4616 -4.2357 O.3 1 LGD -0.5872
91 C51 -5.1190 13.1846 -0.5714 C.3 1 LGD 0.1047
92 C52 -4.1198 14.1065 -1.3208 C.3 1 LGD -0.1399
93 C53 -2.6990 13.5083 -1.4626 C.3 1 LGD 0.1065
94 N18 -1.9944 13.5578 -0.1647 N.4 1 LGD -0.7471
95 C54 -0.6214 13.0263 -0.2597 C.3 1 LGD 0.1812
96 C55 -0.6529 11.5390 -0.6022 C.ar 1 LGD -0.1637
97 C56 0.0892 13.2819 1.0853 C.3 1 LGD -0.1264
98 C57 -1.3958 10.6290 0.1746 C.ar 1 LGD -0.1070
99 C58 -1.4067 9.2634 -0.1487 C.ar 1 LGD -0.1189
100 C59 -0.6728 8.7965 -1.2496 C.ar 1 LGD -0.1069
101 C60 0.0672 9.6983 -2.0301 C.ar 1 LGD -0.1189
102 C61 0.0751 11.0655 -1.7085 C.ar 1 LGD -0.1070
103 H1 3.0557 4.3308 1.1572 H 1 LGD 0.1045
104 H2 0.7591 7.1368 0.5458 H 1 LGD 0.3220
105 H3 3.6507 6.2498 -0.3723 H 1 LGD 0.0593
106 H4 2.2087 6.5781 -2.1529 H 1 LGD 0.4224
107 H5 4.1906 3.8888 -0.9838 H 1 LGD 0.0418
108 H6 2.6222 3.7306 -1.8036 H 1 LGD 0.0418
109 H7 3.8433 4.8700 -2.4188 H 1 LGD 0.0418
110 H8 1.7611 8.4678 3.0012 H 1 LGD 0.0625
111 H9 0.6392 9.1268 1.7972 H 1 LGD 0.0625
112 H10 -2.1992 -3.5893 -0.8682 H 1 LGD 0.1381
113 H11 0.8073 -1.7588 0.2059 H 1 LGD 0.2907
114 H12 -0.1021 0.6846 -1.1154 H 1 LGD 0.0791
115 H13 -1.6325 0.5600 0.8280 H 1 LGD 0.0657
116 H14 -0.9479 2.7640 -0.0164 H 1 LGD 0.0518
117 H15 -0.2019 -0.5848 2.2172 H 1 LGD 0.4144
118 H16 0.4510 4.4876 -0.2565 H 1 LGD 0.3231
119 H17 -2.7413 2.5484 1.7034 H 1 LGD 0.0566
120 H18 -1.5350 2.7556 2.9930 H 1 LGD 0.0566
121 H19 -1.8600 4.0816 1.8586 H 1 LGD 0.0566
122 H20 2.3187 -0.0674 -0.8071 H 1 LGD 0.0290
123 H21 2.0199 1.5828 -0.2676 H 1 LGD 0.0290
124 H22 2.1687 0.2696 0.9269 H 1 LGD 0.0290
125 H23 4.8744 -6.4350 -2.7639 H 1 LGD 0.1192
126 H24 0.7647 -8.1694 -6.2166 H 1 LGD 0.4633
127 H25 2.3949 -8.6520 -5.8611 H 1 LGD 0.4633
128 H26 3.5522 -5.2594 -0.4442 H 1 LGD 0.4612
129 H27 5.8604 -5.4816 -0.0499 H 1 LGD 0.1556
130 H28 6.2061 -4.8933 -1.6871 H 1 LGD 0.1556
131 H29 4.7733 -3.2407 0.4706 H 1 LGD 0.1320
132 H30 5.2418 -1.4663 -1.1050 H 1 LGD 0.4754
133 H31 4.2689 -2.5959 -1.7842 H 1 LGD 0.4754
134 H32 6.1854 -1.1986 1.1484 H 1 LGD 0.3572
135 H33 7.8847 -1.5297 1.3931 H 1 LGD 0.3572
136 H34 0.7748 -3.8116 -1.3073 H 1 LGD 0.2844
137 H35 -1.1964 -5.5885 -5.1475 H 1 LGD 0.0776
138 H36 -0.7262 -7.0714 -5.9566 H 1 LGD 0.0776
139 H37 -1.6664 -7.1537 -4.4655 H 1 LGD 0.0776
140 H38 5.4507 -7.6402 -0.7565 H 1 LGD 0.1180
141 H39 4.2595 -8.6047 -1.6053 H 1 LGD 0.1180
142 H40 4.6835 -9.2380 1.0845 H 1 LGD 0.3494
143 H41 3.3330 -8.6752 2.0467 H 1 LGD 0.3494
144 H42 -1.1477 7.5187 2.6730 H 1 LGD 0.0756
145 H43 -0.0371 7.0438 3.9547 H 1 LGD 0.0756
146 H44 -1.0455 11.6013 6.5674 H 1 LGD 0.1983
147 H45 -1.8181 -3.4942 1.5235 H 1 LGD 0.1053
148 H46 -2.7883 -5.6094 -0.2250 H 1 LGD 0.1076
149 H47 -1.7364 -5.5541 3.3116 H 1 LGD 0.0708
150 H48 -2.2525 -7.8130 4.1773 H 1 LGD 0.1064
151 H49 -1.8591 -9.1600 2.0684 H 1 LGD 0.0964
152 H50 -3.1680 -7.9184 0.4320 H 1 LGD 0.0979
153 H51 -4.7076 -5.7336 4.0464 H 1 LGD 0.0710
154 H52 -3.3594 -5.6422 5.1961 H 1 LGD 0.0710
155 H53 -3.8730 -3.7214 3.1451 H 1 LGD 0.4079
156 H54 -4.4624 -7.5151 2.4359 H 1 LGD 0.4141
157 H55 -0.1635 -6.9867 1.7757 H 1 LGD 0.4237
158 H56 -0.8690 -9.8279 0.2482 H 1 LGD 0.1110
159 H57 -2.3643 -8.4592 -2.8161 H 1 LGD 0.0575
160 H58 -2.1371 -11.4651 -3.3655 H 1 LGD 0.0866
161 H59 0.5392 -10.6712 -3.3999 H 1 LGD 0.0788
162 H60 -0.0107 -8.5218 -2.3421 H 1 LGD 0.0379
163 H61 -4.3477 -10.7958 -2.6479 H 1 LGD 0.0658
164 H62 -4.7113 -9.1135 -2.2176 H 1 LGD 0.0658
165 H63 -0.9949 -10.7156 -5.1644 H 1 LGD 0.4349
166 H64 1.3656 -8.6943 -0.5246 H 1 LGD 0.4159
167 H65 2.0649 -1.9886 3.7557 H 1 LGD 0.0933
168 H66 3.3981 -3.4345 2.0857 H 1 LGD 0.2635
169 H67 1.8297 -4.5915 0.3611 H 1 LGD 0.1737
170 H68 -4.2849 15.2415 4.2698 H 1 LGD 0.2154
171 H69 -4.2519 11.9473 0.9524 H 1 LGD 0.3294
172 H70 -0.2886 -14.0594 -0.6310 H 1 LGD 0.3431
173 H71 -0.1980 -15.0818 -2.0526 H 1 LGD 0.3431
174 H72 -3.6146 -9.7210 -4.7556 H 1 LGD 0.4169
175 H73 -5.2430 12.2526 -1.1374 H 1 LGD 0.0836
176 H74 -6.0999 13.6744 -0.5161 H 1 LGD 0.0836
177 H75 -4.5182 14.2952 -2.3254 H 1 LGD 0.0911
178 H76 -4.0629 15.0837 -0.8245 H 1 LGD 0.0911
179 H77 -2.7615 12.4744 -1.8084 H 1 LGD 0.1015
180 H78 -2.1301 14.0886 -2.1915 H 1 LGD 0.1015
181 H79 -2.5144 13.0178 0.5146 H 1 LGD 0.4562
182 H80 -0.0935 13.5745 -1.0429 H 1 LGD 0.1029
183 H81 -0.4343 12.7860 1.9124 H 1 LGD 0.0751
184 H82 1.1175 12.9009 1.0537 H 1 LGD 0.0751
185 H83 0.1317 14.3567 1.3015 H 1 LGD 0.0751
186 H84 -1.9652 10.9773 1.0296 H 1 LGD 0.1510
187 H85 -1.9805 8.5683 0.4573 H 1 LGD 0.1518
188 H86 -0.6797 7.7392 -1.4988 H 1 LGD 0.1468
189 H87 0.6342 9.3387 -2.8840 H 1 LGD 0.1518
190 H88 0.6513 11.7567 -2.3177 H 1 LGD 0.1510
191 H89 3.7771 -4.4689 -1.8578 H 1 LGD 0.4612
192 H90 5.8697 -2.5361 -2.1772 H 1 LGD 0.4754
193 H91 -1.9565 14.5164 0.1512 H 1 LGD 0.4562
@BOND
1 1 2 1
2 2 3 am
3 1 4 1
4 4 5 1
5 4 6 1
6 2 7 2
7 3 8 1
8 9 10 1
9 10 11 am
10 10 12 2
11 11 13 1
12 13 14 1
13 14 15 1
14 14 16 1
15 15 17 1
16 17 18 am
17 17 19 2
18 15 20 1
19 13 21 1
20 22 23 ar
21 23 24 ar
22 24 25 ar
23 25 26 ar
24 26 27 ar
25 22 27 ar
26 27 28 1
27 23 29 1
28 25 30 1
29 28 31 1
30 31 32 1
31 32 33 1
32 33 34 1
33 33 35 1
34 34 36 am
35 34 37 2
36 30 38 2
37 30 39 am
38 24 40 1
39 41 42 1
40 28 41 1
41 42 43 am
42 42 44 2
43 9 39 1
44 1 18 1
45 8 45 1
46 45 46 1
47 46 47 1
48 47 48 1
49 48 49 2
50 49 50 1
51 46 50 2
52 9 51 1
53 52 53 1
54 53 54 1
55 54 55 1
56 55 56 1
57 56 57 1
58 57 58 1
59 53 58 1
60 55 59 1
61 59 60 1
62 56 61 1
63 57 62 1
64 58 63 1
65 63 64 1
66 64 65 1
67 65 66 1
68 66 67 1
69 67 68 1
70 68 69 1
71 64 69 1
72 66 70 1
73 67 71 1
74 68 72 1
75 69 73 1
76 51 74 1
77 74 75 1
78 75 76 2
79 76 77 1
80 77 78 1
81 74 78 2
82 51 52 1
83 79 80 1
84 49 80 1
85 79 81 1
86 81 82 2
87 82 83 1
88 80 83 2
89 82 84 1
90 84 85 am
91 84 86 2
92 72 87 1
93 87 88 am
94 87 89 2
95 70 90 1
96 85 91 1
97 91 92 1
98 92 93 1
99 93 94 1
100 94 95 1
101 95 96 1
102 95 97 1
103 96 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 101 102 ar
108 96 102 ar
109 1 103 1
110 3 104 1
111 4 105 1
112 5 106 1
113 6 107 1
114 6 108 1
115 6 109 1
116 8 110 1
117 8 111 1
118 9 112 1
119 11 113 1
120 13 114 1
121 14 115 1
122 15 116 1
123 16 117 1
124 18 118 1
125 20 119 1
126 20 120 1
127 20 121 1
128 21 122 1
129 21 123 1
130 21 124 1
131 28 125 1
132 29 126 1
133 29 127 1
134 31 128 1
135 32 129 1
136 32 130 1
137 33 131 1
138 35 132 1
139 35 133 1
140 36 134 1
141 36 135 1
142 39 136 1
143 40 137 1
144 40 138 1
145 40 139 1
146 41 140 1
147 41 141 1
148 43 142 1
149 43 143 1
150 45 144 1
151 45 145 1
152 48 146 1
153 51 147 1
154 53 148 1
155 55 149 1
156 56 150 1
157 57 151 1
158 58 152 1
159 59 153 1
160 59 154 1
161 60 155 1
162 61 156 1
163 62 157 1
164 64 158 1
165 66 159 1
166 67 160 1
167 68 161 1
168 69 162 1
169 70 163 1
170 70 164 1
171 71 165 1
172 73 166 1
173 76 167 1
174 77 168 1
175 78 169 1
176 81 170 1
177 85 171 1
178 88 172 1
179 88 173 1
180 90 174 1
181 91 175 1
182 91 176 1
183 92 177 1
184 92 178 1
185 93 179 1
186 93 180 1
187 94 181 1
188 95 182 1
189 97 183 1
190 97 184 1
191 97 185 1
192 98 186 1
193 99 187 1
194 100 188 1
195 101 189 1
196 102 190 1
197 31 191 1
198 35 192 1
199 94 193 1