@COMMENT
LIGANDBOX_ID = D08336-12
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08336
NAME = Peplomycin_(INN)_PEP
MOLECULAR_FORMULA = C61H88N18O21S2
MOLECULAR_WEIGHT = 1473.610
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 26
NUM_OF_ACCEPTOR = 26
NUM_OF_CHIRAL_ATOMS = 20
TPSA = 639.1000
HOMO = -14.6368
LUMO = -9.9810
mLOGS = -0.529
mLOGD = -2.122
mLOGPA = -8.954
@MOLECULE
D08336-12
193 199 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 2.4089 -5.7865 3.8644 C.3 1 LGD 0.0731
2 C2 1.9177 -5.4571 2.4437 C.2 1 LGD 0.6401
3 N1 0.6543 -4.9059 2.2794 N.am 1 LGD -0.6154
4 C3 1.4297 -6.7201 4.6363 C.3 1 LGD 0.1308
5 O1 0.2318 -6.0296 4.9993 O.3 1 LGD -0.6571
6 C4 2.0843 -7.3059 5.9083 C.3 1 LGD -0.1317
7 O2 2.6196 -5.6574 1.4671 O.2 1 LGD -0.5439
8 C5 0.0890 -4.5768 0.9658 C.3 1 LGD 0.1232
9 C6 3.0420 0.4134 -0.0400 C.3 1 LGD 0.0331
10 C7 3.1072 -0.7002 1.0233 C.2 1 LGD 0.6419
11 N2 2.2932 -0.6190 2.1477 N.am 1 LGD -0.6266
12 O3 3.8586 -1.6510 0.8936 O.2 1 LGD -0.5229
13 C8 2.3469 -1.5745 3.2614 C.3 1 LGD 0.0794
14 C9 3.6544 -1.3609 4.0963 C.3 1 LGD 0.1395
15 C10 3.8823 -2.4406 5.2025 C.3 1 LGD -0.1121
16 O4 3.6598 -0.0526 4.6736 O.3 1 LGD -0.5910
17 C11 3.8380 -3.8513 4.5903 C.2 1 LGD 0.6519
18 N3 2.6324 -4.5377 4.6137 N.am 1 LGD -0.6108
19 O5 4.8248 -4.3796 4.1060 O.2 1 LGD -0.5318
20 C12 5.2155 -2.2140 5.9657 C.3 1 LGD -0.0768
21 C13 1.0508 -1.4068 4.0986 C.3 1 LGD -0.0917
22 N4 -2.0916 1.2804 -3.8715 N.ar 1 LGD -0.7591
23 C14 -1.2035 0.6507 -4.6554 C.ar 1 LGD 0.6936
24 C15 0.0743 0.2615 -4.1873 C.ar 1 LGD -0.2769
25 C16 0.4030 0.6372 -2.8575 C.ar 1 LGD 0.4508
26 N5 -0.5103 1.2501 -2.0795 N.ar 1 LGD -0.7821
27 C17 -1.7095 1.5406 -2.6142 C.ar 1 LGD 0.6204
28 C18 -2.7798 2.1180 -1.6785 C.3 1 LGD 0.1309
29 N6 -1.6017 0.3924 -5.9379 N.pl3 1 LGD -0.9256
30 C19 1.7484 0.3930 -2.2051 C.2 1 LGD 0.5872
31 N7 -2.4774 1.6906 -0.2925 N.4 1 LGD -0.7677
32 C20 -3.5599 1.9402 0.6743 C.3 1 LGD 0.1052
33 C21 -3.1112 1.4255 2.0625 C.3 1 LGD 0.0065
34 C22 -4.1854 1.6836 3.1322 C.2 1 LGD 0.6242
35 N8 -2.7962 -0.0206 1.9835 N.4 1 LGD -0.8322
36 N9 -3.8649 1.5101 4.4611 N.am 1 LGD -0.6599
37 O6 -5.3139 2.0493 2.8611 O.2 1 LGD -0.4910
38 O7 2.7837 0.3131 -2.8455 O.2 1 LGD -0.5290
39 N10 1.7937 0.3098 -0.8161 N.am 1 LGD -0.5747
40 C23 1.0116 -0.5712 -5.0714 C.3 1 LGD -0.0565
41 C24 -2.8996 3.6674 -1.7998 C.3 1 LGD -0.1855
42 C25 -1.6935 4.4706 -1.2902 C.2 1 LGD 0.6598
43 N11 -1.5793 5.7957 -1.6432 N.am 1 LGD -0.6355
44 O8 -0.8287 4.0025 -0.5745 O.2 1 LGD -0.6403
45 C26 0.4890 -3.1444 0.5525 C.3 1 LGD -0.1538
46 C27 -0.2561 -2.6975 -0.6697 C.ar 1 LGD 0.4596
47 S1 0.2660 -3.0864 -2.3128 S.3 1 LGD -0.0078
48 C28 -1.2500 -2.4437 -2.9351 C.ar 1 LGD -0.1676
49 C29 -1.9729 -1.9847 -1.8662 C.ar 1 LGD 0.2414
50 N12 -1.4309 -2.1036 -0.6195 N.ar 1 LGD -0.7394
51 C30 3.2071 1.8427 0.5728 C.3 1 LGD 0.0983
52 O9 3.1169 2.8463 -0.4681 O.3 1 LGD -0.4471
53 C31 4.3038 3.0721 -1.2664 C.3 1 LGD 0.3447
54 O10 5.4162 3.4121 -0.3968 O.3 1 LGD -0.4534
55 C32 5.2146 4.5683 0.4576 C.3 1 LGD 0.0513
56 C33 5.0465 5.8236 -0.4425 C.3 1 LGD 0.1039
57 C34 3.8871 5.6174 -1.4527 C.3 1 LGD 0.0873
58 C35 4.0821 4.2756 -2.2348 C.3 1 LGD 0.1053
59 C36 6.4128 4.6762 1.4308 C.3 1 LGD 0.1477
60 O11 6.4926 3.5093 2.2444 O.3 1 LGD -0.5858
61 O12 6.2556 6.0849 -1.1586 O.3 1 LGD -0.5796
62 O13 2.6298 5.6327 -0.7724 O.3 1 LGD -0.6028
63 O14 2.9517 4.0064 -3.1090 O.3 1 LGD -0.4367
64 C37 2.6617 4.9804 -4.1505 C.3 1 LGD 0.3348
65 O15 1.2474 4.8736 -4.4739 O.3 1 LGD -0.4291
66 C38 0.8529 4.3798 -5.7822 C.3 1 LGD 0.1125
67 C39 1.6738 3.0879 -6.0783 C.3 1 LGD 0.0864
68 C40 3.2029 3.4016 -6.1273 C.3 1 LGD 0.1525
69 C41 3.5350 4.7496 -5.4279 C.3 1 LGD 0.1099
70 C42 -0.6800 4.1683 -5.7305 C.3 1 LGD 0.1542
71 O16 1.2719 2.4680 -7.3028 O.3 1 LGD -0.6414
72 O17 3.9189 2.3226 -5.4786 O.3 1 LGD -0.4131
73 O18 4.9369 4.8819 -5.1871 O.3 1 LGD -0.5682
74 C43 2.2080 2.2093 1.6502 C.ar 1 LGD 0.3443
75 N13 2.5818 2.5246 2.9107 N.ar 1 LGD -0.6170
76 C44 1.4638 2.7688 3.5604 C.ar 1 LGD 0.4446
77 N14 0.3701 2.5947 2.7075 N.ar 1 LGD -0.3805
78 C45 0.8578 2.2239 1.4576 C.ar 1 LGD -0.2858
79 S2 -4.0861 -1.3350 -3.7066 S.3 1 LGD 0.0220
80 C46 -3.2876 -1.4582 -2.1388 C.ar 1 LGD 0.3984
81 C47 -5.5031 -0.6855 -2.8875 C.ar 1 LGD -0.0858
82 C48 -5.2672 -0.6776 -1.5347 C.ar 1 LGD 0.1983
83 N15 -4.0333 -1.0910 -1.1156 N.ar 1 LGD -0.7809
84 C49 -6.3293 -0.2991 -0.5802 C.2 1 LGD 0.5575
85 N16 -6.0560 -0.4416 0.7723 N.am 1 LGD -0.6358
86 O19 -7.4303 0.0852 -0.9361 O.2 1 LGD -0.4910
87 C50 4.0985 1.1298 -6.1179 C.2 1 LGD 0.7533
88 N17 4.7097 0.1087 -5.4314 N.am 1 LGD -0.6601
89 O20 3.7397 0.9117 -7.2623 O.2 1 LGD -0.6234
90 O21 -1.2002 3.8358 -7.0153 O.3 1 LGD -0.5982
91 C51 -7.1087 -0.4678 1.7932 C.3 1 LGD 0.0995
92 C52 -7.9503 -1.7693 1.7087 C.3 1 LGD -0.1425
93 C53 -7.1208 -3.0651 1.8818 C.3 1 LGD 0.1008
94 N18 -6.3351 -3.3457 0.6611 N.4 1 LGD -0.7480
95 C54 -5.5325 -4.5765 0.8006 C.3 1 LGD 0.1763
96 C55 -4.4938 -4.4012 1.9061 C.ar 1 LGD -0.1509
97 C56 -4.8740 -4.8887 -0.5604 C.3 1 LGD -0.1258
98 C57 -3.5260 -3.3821 1.8389 C.ar 1 LGD -0.1177
99 C58 -2.5698 -3.2435 2.8563 C.ar 1 LGD -0.1294
100 C59 -2.5777 -4.1169 3.9532 C.ar 1 LGD -0.0770
101 C60 -3.5455 -5.1300 4.0312 C.ar 1 LGD -0.1294
102 C61 -4.5004 -5.2714 3.0109 C.ar 1 LGD -0.1177
103 H1 3.3584 -6.3249 3.7475 H 1 LGD 0.1415
104 H2 0.0844 -4.7783 3.1037 H 1 LGD 0.3172
105 H3 1.1762 -7.5613 3.9784 H 1 LGD 0.0554
106 H4 -0.2784 -6.6266 5.5749 H 1 LGD 0.4248
107 H5 3.0030 -7.8499 5.6546 H 1 LGD 0.0609
108 H6 2.3445 -6.5142 6.6226 H 1 LGD 0.0609
109 H7 1.4052 -8.0103 6.4050 H 1 LGD 0.0609
110 H8 0.4293 -5.2938 0.2075 H 1 LGD 0.0586
111 H9 -1.0041 -4.6481 1.0243 H 1 LGD 0.0586
112 H10 3.9007 0.2377 -0.6996 H 1 LGD 0.1365
113 H11 1.6663 0.1683 2.2259 H 1 LGD 0.2927
114 H12 2.3531 -2.5840 2.8341 H 1 LGD 0.0864
115 H13 4.5024 -1.4375 3.4040 H 1 LGD 0.0826
116 H14 3.0685 -2.3738 5.9359 H 1 LGD 0.0492
117 H15 3.4803 0.5825 3.9567 H 1 LGD 0.4158
118 H16 1.8491 -4.1221 5.0965 H 1 LGD 0.3073
119 H17 6.0692 -2.2011 5.2760 H 1 LGD 0.0619
120 H18 5.2023 -1.2616 6.5105 H 1 LGD 0.0619
121 H19 5.3806 -3.0137 6.6989 H 1 LGD 0.0619
122 H20 0.1636 -1.4912 3.4623 H 1 LGD 0.0248
123 H21 0.9750 -2.1778 4.8744 H 1 LGD 0.0248
124 H22 1.0126 -0.4242 4.5854 H 1 LGD 0.0248
125 H23 -3.7410 1.6815 -1.9562 H 1 LGD 0.1161
126 H24 -0.8771 0.2014 -6.6133 H 1 LGD 0.4620
127 H25 -2.4189 0.8917 -6.2559 H 1 LGD 0.4620
128 H26 -1.6376 2.1799 -0.0049 H 1 LGD 0.4698
129 H27 -3.7655 3.0116 0.7265 H 1 LGD 0.1550
130 H28 -4.4662 1.4245 0.3525 H 1 LGD 0.1550
131 H29 -2.2151 1.9656 2.3724 H 1 LGD 0.1329
132 H30 -2.5812 -0.3744 2.9057 H 1 LGD 0.4748
133 H31 -1.9996 -0.1818 1.3829 H 1 LGD 0.4748
134 H32 -2.9311 1.2458 4.7370 H 1 LGD 0.3549
135 H33 -4.5666 1.6902 5.1651 H 1 LGD 0.3549
136 H34 0.9163 0.3371 -0.3188 H 1 LGD 0.2868
137 H35 1.6721 -1.2180 -4.4829 H 1 LGD 0.0750
138 H36 0.4538 -1.2433 -5.7350 H 1 LGD 0.0750
139 H37 1.6330 0.0717 -5.7009 H 1 LGD 0.0750
140 H38 -3.7875 4.0147 -1.2577 H 1 LGD 0.1113
141 H39 -3.0665 3.9312 -2.8518 H 1 LGD 0.1113
142 H40 -2.2795 6.2315 -2.2245 H 1 LGD 0.3510
143 H41 -0.7872 6.3276 -1.3130 H 1 LGD 0.3510
144 H42 0.2750 -2.4550 1.3750 H 1 LGD 0.0806
145 H43 1.5699 -3.1059 0.3716 H 1 LGD 0.0806
146 H44 -1.4819 -2.4694 -3.9918 H 1 LGD 0.2074
147 H45 4.1981 1.8812 1.0417 H 1 LGD 0.1076
148 H46 4.5437 2.1690 -1.8395 H 1 LGD 0.1078
149 H47 4.3060 4.4421 1.0601 H 1 LGD 0.0698
150 H48 4.8082 6.6878 0.1908 H 1 LGD 0.1078
151 H49 3.9226 6.4584 -2.1553 H 1 LGD 0.0858
152 H50 4.9952 4.3580 -2.8321 H 1 LGD 0.0986
153 H51 7.3442 4.7973 0.8636 H 1 LGD 0.0727
154 H52 6.2863 5.5637 2.0636 H 1 LGD 0.0727
155 H53 6.5187 2.7467 1.6399 H 1 LGD 0.4071
156 H54 6.6332 5.2215 -1.4038 H 1 LGD 0.4157
157 H55 2.3594 4.7011 -0.6657 H 1 LGD 0.4273
158 H56 2.8361 5.9926 -3.7749 H 1 LGD 0.0804
159 H57 1.0744 5.1388 -6.5440 H 1 LGD 0.0785
160 H58 1.4940 2.3944 -5.2479 H 1 LGD 0.0495
161 H59 3.5337 3.4910 -7.1707 H 1 LGD 0.0985
162 H60 3.2565 5.5418 -6.1343 H 1 LGD 0.0621
163 H61 -0.9051 3.3704 -5.0156 H 1 LGD 0.0335
164 H62 -1.1587 5.0862 -5.3673 H 1 LGD 0.0335
165 H63 2.0119 1.8973 -7.5888 H 1 LGD 0.4647
166 H64 5.1464 5.8323 -5.1810 H 1 LGD 0.4244
167 H65 1.3646 3.0617 4.5976 H 1 LGD 0.0913
168 H66 -0.5973 2.7412 2.9547 H 1 LGD 0.2585
169 H67 0.2368 2.0232 0.5976 H 1 LGD 0.1671
170 H68 -6.3959 -0.4183 -3.4381 H 1 LGD 0.2336
171 H69 -5.1227 -0.7085 1.0372 H 1 LGD 0.2573
172 H70 4.9766 0.2445 -4.4680 H 1 LGD 0.3424
173 H71 4.8560 -0.7792 -5.8869 H 1 LGD 0.3424
174 H72 -0.5134 3.3064 -7.4635 H 1 LGD 0.4360
175 H73 -6.6451 -0.4034 2.7857 H 1 LGD 0.0902
176 H74 -7.7643 0.4045 1.6730 H 1 LGD 0.0902
177 H75 -8.7079 -1.7356 2.5015 H 1 LGD 0.1085
178 H76 -8.5010 -1.8047 0.7601 H 1 LGD 0.1085
179 H77 -6.4494 -2.9648 2.7370 H 1 LGD 0.1094
180 H78 -7.7932 -3.9060 2.0626 H 1 LGD 0.1094
181 H79 -5.7213 -2.5662 0.4707 H 1 LGD 0.4475
182 H80 -6.2055 -5.3978 1.0560 H 1 LGD 0.1244
183 H81 -4.2212 -4.0705 -0.8878 H 1 LGD 0.0789
184 H82 -4.2688 -5.8014 -0.4924 H 1 LGD 0.0789
185 H83 -5.6378 -5.0456 -1.3322 H 1 LGD 0.0789
186 H84 -3.5103 -2.7049 0.9937 H 1 LGD 0.1425
187 H85 -1.8143 -2.4694 2.7887 H 1 LGD 0.1436
188 H86 -1.8354 -4.0111 4.7395 H 1 LGD 0.1718
189 H87 -3.5535 -5.8084 4.8797 H 1 LGD 0.1436
190 H88 -5.2430 -6.0618 3.0772 H 1 LGD 0.1425
191 H89 -2.2791 0.7000 -0.3256 H 1 LGD 0.4698
192 H90 -3.5865 -0.5299 1.6175 H 1 LGD 0.4748
193 H91 -6.9687 -3.4525 -0.1187 H 1 LGD 0.4475
@BOND
1 1 2 1
2 2 3 am
3 1 4 1
4 4 5 1
5 4 6 1
6 2 7 2
7 3 8 1
8 9 10 1
9 10 11 am
10 10 12 2
11 11 13 1
12 13 14 1
13 14 15 1
14 14 16 1
15 15 17 1
16 17 18 am
17 17 19 2
18 15 20 1
19 13 21 1
20 22 23 ar
21 23 24 ar
22 24 25 ar
23 25 26 ar
24 26 27 ar
25 22 27 ar
26 27 28 1
27 23 29 1
28 25 30 1
29 28 31 1
30 31 32 1
31 32 33 1
32 33 34 1
33 33 35 1
34 34 36 am
35 34 37 2
36 30 38 2
37 30 39 am
38 24 40 1
39 41 42 1
40 28 41 1
41 42 43 am
42 42 44 2
43 9 39 1
44 1 18 1
45 8 45 1
46 45 46 1
47 46 47 1
48 47 48 1
49 48 49 2
50 49 50 1
51 46 50 2
52 9 51 1
53 52 53 1
54 53 54 1
55 54 55 1
56 55 56 1
57 56 57 1
58 57 58 1
59 53 58 1
60 55 59 1
61 59 60 1
62 56 61 1
63 57 62 1
64 58 63 1
65 63 64 1
66 64 65 1
67 65 66 1
68 66 67 1
69 67 68 1
70 68 69 1
71 64 69 1
72 66 70 1
73 67 71 1
74 68 72 1
75 69 73 1
76 51 74 1
77 74 75 1
78 75 76 2
79 76 77 1
80 77 78 1
81 74 78 2
82 51 52 1
83 79 80 1
84 49 80 1
85 79 81 1
86 81 82 2
87 82 83 1
88 80 83 2
89 82 84 1
90 84 85 am
91 84 86 2
92 72 87 1
93 87 88 am
94 87 89 2
95 70 90 1
96 85 91 1
97 91 92 1
98 92 93 1
99 93 94 1
100 94 95 1
101 95 96 1
102 95 97 1
103 96 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 101 102 ar
108 96 102 ar
109 1 103 1
110 3 104 1
111 4 105 1
112 5 106 1
113 6 107 1
114 6 108 1
115 6 109 1
116 8 110 1
117 8 111 1
118 9 112 1
119 11 113 1
120 13 114 1
121 14 115 1
122 15 116 1
123 16 117 1
124 18 118 1
125 20 119 1
126 20 120 1
127 20 121 1
128 21 122 1
129 21 123 1
130 21 124 1
131 28 125 1
132 29 126 1
133 29 127 1
134 31 128 1
135 32 129 1
136 32 130 1
137 33 131 1
138 35 132 1
139 35 133 1
140 36 134 1
141 36 135 1
142 39 136 1
143 40 137 1
144 40 138 1
145 40 139 1
146 41 140 1
147 41 141 1
148 43 142 1
149 43 143 1
150 45 144 1
151 45 145 1
152 48 146 1
153 51 147 1
154 53 148 1
155 55 149 1
156 56 150 1
157 57 151 1
158 58 152 1
159 59 153 1
160 59 154 1
161 60 155 1
162 61 156 1
163 62 157 1
164 64 158 1
165 66 159 1
166 67 160 1
167 68 161 1
168 69 162 1
169 70 163 1
170 70 164 1
171 71 165 1
172 73 166 1
173 76 167 1
174 77 168 1
175 78 169 1
176 81 170 1
177 85 171 1
178 88 172 1
179 88 173 1
180 90 174 1
181 91 175 1
182 91 176 1
183 92 177 1
184 92 178 1
185 93 179 1
186 93 180 1
187 94 181 1
188 95 182 1
189 97 183 1
190 97 184 1
191 97 185 1
192 98 186 1
193 99 187 1
194 100 188 1
195 101 189 1
196 102 190 1
197 31 191 1
198 35 192 1
199 94 193 1