@COMMENT
LIGANDBOX_ID = D08336-13
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08336
NAME = Peplomycin_(INN)_PEP
MOLECULAR_FORMULA = C61H88N18O21S2
MOLECULAR_WEIGHT = 1473.610
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 26
NUM_OF_ACCEPTOR = 26
NUM_OF_CHIRAL_ATOMS = 20
TPSA = 639.1000
HOMO = -14.6368
LUMO = -9.9810
mLOGS = -0.529
mLOGD = -2.122
mLOGPA = -8.954
@MOLECULE
D08336-13
193 199 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.0000 7.2130 -0.9353 C.3 1 LGD 0.0717
2 C2 -1.9289 5.9137 -1.7550 C.2 1 LGD 0.6399
3 N1 -0.7156 5.2467 -1.8494 N.am 1 LGD -0.6153
4 C3 -0.9667 8.2758 -1.4137 C.3 1 LGD 0.1305
5 O1 0.3672 7.8968 -1.0655 O.3 1 LGD -0.6569
6 C4 -1.2699 9.6714 -0.8229 C.3 1 LGD -0.1312
7 O2 -2.9142 5.4567 -2.3089 O.2 1 LGD -0.5416
8 C5 -0.5339 4.0277 -2.6437 C.3 1 LGD 0.1219
9 C6 -2.8772 0.2187 1.2139 C.3 1 LGD 0.0287
10 C7 -2.7827 1.7526 1.1177 C.2 1 LGD 0.6441
11 N2 -1.6667 2.4009 1.6335 N.am 1 LGD -0.6240
12 O3 -3.6671 2.4058 0.5916 O.2 1 LGD -0.5208
13 C8 -1.5214 3.8622 1.6617 C.3 1 LGD 0.0803
14 C9 -2.4622 4.4799 2.7511 C.3 1 LGD 0.1397
15 C10 -2.5030 6.0417 2.7430 C.3 1 LGD -0.1120
16 O4 -2.0915 4.0042 4.0474 O.3 1 LGD -0.5956
17 C11 -2.8499 6.5631 1.3381 C.2 1 LGD 0.6519
18 N3 -1.8056 6.9090 0.4930 N.am 1 LGD -0.6110
19 O5 -4.0021 6.6940 0.9603 O.2 1 LGD -0.5311
20 C12 -3.4972 6.5997 3.7970 C.3 1 LGD -0.0769
21 C13 -0.0221 4.1893 1.8868 C.3 1 LGD -0.0920
22 N4 0.9412 -3.8556 -2.0270 N.ar 1 LGD -0.7595
23 C14 -0.1856 -3.8385 -2.7549 C.ar 1 LGD 0.7061
24 C15 -1.2668 -2.9719 -2.4580 C.ar 1 LGD -0.2751
25 C16 -1.1456 -2.1930 -1.2726 C.ar 1 LGD 0.4505
26 N5 0.0017 -2.2160 -0.5648 N.ar 1 LGD -0.7976
27 C17 0.9918 -3.0303 -0.9732 C.ar 1 LGD 0.6311
28 C18 2.3520 -2.9009 -0.2681 C.3 1 LGD 0.1300
29 N6 -0.2257 -4.6906 -3.8246 N.pl3 1 LGD -0.9387
30 C19 -2.2407 -1.3115 -0.6934 C.2 1 LGD 0.5718
31 N7 2.4184 -1.5902 0.4205 N.4 1 LGD -0.7625
32 C20 3.7740 -1.2109 0.8572 C.3 1 LGD 0.1008
33 C21 3.7364 0.2272 1.4263 C.3 1 LGD 0.0073
34 C22 5.0976 0.6298 2.0176 C.2 1 LGD 0.6224
35 N8 3.3549 1.1761 0.3554 N.4 1 LGD -0.8335
36 N9 5.1889 1.7792 2.7721 N.am 1 LGD -0.6579
37 O6 6.1095 -0.0255 1.8507 O.2 1 LGD -0.4914
38 O7 -3.4066 -1.3897 -1.0412 O.2 1 LGD -0.5117
39 N10 -1.8941 -0.4143 0.3144 N.am 1 LGD -0.5738
40 C23 -2.4615 -2.8617 -3.4187 C.3 1 LGD -0.0533
41 C24 2.6554 -4.0742 0.7121 C.3 1 LGD -0.1858
42 C25 1.8004 -4.1134 1.9858 C.2 1 LGD 0.6449
43 N11 2.1125 -5.0248 2.9686 N.am 1 LGD -0.6446
44 O8 0.8563 -3.3730 2.1841 O.2 1 LGD -0.6286
45 C26 -0.8535 2.7802 -1.7944 C.3 1 LGD -0.1528
46 C27 -0.4787 1.5239 -2.5211 C.ar 1 LGD 0.4597
47 S1 -1.5168 0.7726 -3.7373 S.3 1 LGD 0.0071
48 C28 -0.2251 -0.3577 -4.1274 C.ar 1 LGD -0.1750
49 C29 0.8361 -0.0674 -3.3122 C.ar 1 LGD 0.2421
50 N12 0.7069 0.9585 -2.4215 N.ar 1 LGD -0.7273
51 C30 -2.7158 -0.3112 2.6788 C.3 1 LGD 0.1032
52 O9 -2.7709 -1.7552 2.6858 O.3 1 LGD -0.4520
53 C31 -4.0695 -2.3684 2.5218 C.3 1 LGD 0.3387
54 O10 -4.9310 -1.9970 3.6259 O.3 1 LGD -0.4470
55 C32 -4.4521 -2.3574 4.9457 C.3 1 LGD 0.0509
56 C33 -4.3647 -3.9093 5.0328 C.3 1 LGD 0.1045
57 C34 -3.4494 -4.4662 3.9083 C.3 1 LGD 0.0930
58 C35 -3.9139 -3.9172 2.5225 C.3 1 LGD 0.0952
59 C36 -5.4116 -1.7433 5.9931 C.3 1 LGD 0.1477
60 O11 -5.4287 -0.3239 5.8704 O.3 1 LGD -0.5856
61 O12 -5.6672 -4.4857 4.9126 O.3 1 LGD -0.5756
62 O13 -2.0879 -4.1128 4.1645 O.3 1 LGD -0.6045
63 O14 -2.9740 -4.2768 1.4847 O.3 1 LGD -0.4687
64 C37 -2.8521 -5.6807 1.1722 C.3 1 LGD 0.3093
65 O15 -4.1256 -6.2163 0.7112 O.3 1 LGD -0.4240
66 C38 -4.4614 -6.1256 -0.6962 C.3 1 LGD 0.1111
67 C39 -3.4008 -6.9372 -1.5261 C.3 1 LGD 0.0997
68 C40 -2.0097 -7.0615 -0.8210 C.3 1 LGD 0.1664
69 C41 -1.7535 -5.8382 0.0843 C.3 1 LGD 0.1413
70 C42 -4.6756 -4.6410 -1.1065 C.3 1 LGD 0.1207
71 O16 -3.2381 -6.3759 -2.8297 O.3 1 LGD -0.6198
72 O17 -1.9933 -8.2501 0.0071 O.3 1 LGD -0.4294
73 O18 -0.4632 -5.8812 0.6894 O.3 1 LGD -0.6056
74 C43 -1.4254 0.0903 3.3616 C.ar 1 LGD 0.3433
75 N13 -1.3893 0.9014 4.4424 N.ar 1 LGD -0.6197
76 C44 -0.1149 1.0209 4.7509 C.ar 1 LGD 0.4430
77 N14 0.6641 0.2848 3.8529 N.ar 1 LGD -0.3799
78 C45 -0.1948 -0.3225 2.9419 C.ar 1 LGD -0.2908
79 S2 2.3009 -2.1582 -4.6419 S.3 1 LGD -0.0252
80 C46 2.0372 -0.8438 -3.4957 C.ar 1 LGD 0.4218
81 C47 3.9700 -2.2546 -4.0844 C.ar 1 LGD -0.0741
82 C48 4.1780 -1.2753 -3.1444 C.ar 1 LGD 0.2016
83 N15 3.1034 -0.5039 -2.8010 N.ar 1 LGD -0.7733
84 C49 5.5193 -1.0264 -2.5789 C.2 1 LGD 0.5611
85 N16 5.6567 0.0730 -1.7453 N.am 1 LGD -0.6474
86 O19 6.4916 -1.7114 -2.8469 O.2 1 LGD -0.4898
87 C50 -1.9171 -9.4856 -0.5718 C.2 1 LGD 0.7518
88 N17 -1.9615 -10.5915 0.2430 N.am 1 LGD -0.6600
89 O20 -1.8108 -9.6676 -1.7722 O.2 1 LGD -0.6066
90 O21 -5.6813 -4.0366 -0.3008 O.3 1 LGD -0.5759
91 C51 6.9597 0.6182 -1.3513 C.3 1 LGD 0.0956
92 C52 7.6244 1.3940 -2.5189 C.3 1 LGD -0.1428
93 C53 6.7775 2.5778 -3.0473 C.3 1 LGD 0.1010
94 N18 5.6609 2.0810 -3.8791 N.4 1 LGD -0.7483
95 C54 4.8339 3.1855 -4.4042 C.3 1 LGD 0.1754
96 C55 4.1573 3.9325 -3.2575 C.ar 1 LGD -0.1515
97 C56 3.7978 2.5938 -5.3830 C.3 1 LGD -0.1261
98 C57 3.3377 3.2569 -2.3348 C.ar 1 LGD -0.1197
99 C58 2.7082 3.9614 -1.2976 C.ar 1 LGD -0.1299
100 C59 2.8926 5.3461 -1.1730 C.ar 1 LGD -0.0792
101 C60 3.7115 6.0255 -2.0877 C.ar 1 LGD -0.1299
102 C61 4.3428 5.3206 -3.1258 C.ar 1 LGD -0.1197
103 H1 -3.0039 7.6275 -1.0944 H 1 LGD 0.1416
104 H2 0.0875 5.6620 -1.3990 H 1 LGD 0.3152
105 H3 -1.0460 8.3553 -2.5056 H 1 LGD 0.0550
106 H4 0.9484 8.6378 -1.3128 H 1 LGD 0.4236
107 H5 -2.2864 9.9898 -1.0864 H 1 LGD 0.0606
108 H6 -1.1881 9.6663 0.2716 H 1 LGD 0.0606
109 H7 -0.5718 10.4199 -1.2185 H 1 LGD 0.0606
110 H8 -1.1753 4.0480 -3.5343 H 1 LGD 0.0567
111 H9 0.5075 3.9802 -2.9849 H 1 LGD 0.0567
112 H10 -3.8938 -0.0319 0.8873 H 1 LGD 0.1413
113 H11 -0.9407 1.8396 2.0540 H 1 LGD 0.2891
114 H12 -1.8122 4.2453 0.6765 H 1 LGD 0.0874
115 H13 -3.4825 4.1381 2.5351 H 1 LGD 0.0835
116 H14 -1.5057 6.4226 2.9983 H 1 LGD 0.0483
117 H15 -2.0643 3.0308 4.0034 H 1 LGD 0.4178
118 H16 -0.8622 6.8731 0.8508 H 1 LGD 0.3070
119 H17 -4.5077 6.2020 3.6376 H 1 LGD 0.0615
120 H18 -3.1834 6.3368 4.8150 H 1 LGD 0.0615
121 H19 -3.5478 7.6944 3.7374 H 1 LGD 0.0615
122 H20 0.5986 3.6901 1.1355 H 1 LGD 0.0241
123 H21 0.1675 5.2663 1.8087 H 1 LGD 0.0241
124 H22 0.3181 3.8504 2.8734 H 1 LGD 0.0241
125 H23 3.1237 -2.9039 -1.0401 H 1 LGD 0.1156
126 H24 -0.9739 -4.6008 -4.4944 H 1 LGD 0.4646
127 H25 0.6287 -5.1583 -4.0868 H 1 LGD 0.4646
128 H26 1.7900 -1.6267 1.2140 H 1 LGD 0.4681
129 H27 4.1139 -1.9053 1.6288 H 1 LGD 0.1554
130 H28 4.4628 -1.2638 0.0119 H 1 LGD 0.1554
131 H29 3.0010 0.2796 2.2314 H 1 LGD 0.1328
132 H30 3.3164 2.1151 0.7278 H 1 LGD 0.4749
133 H31 2.4516 0.9439 -0.0334 H 1 LGD 0.4749
134 H32 4.3716 2.3405 2.9588 H 1 LGD 0.3561
135 H33 6.0818 2.0420 3.1646 H 1 LGD 0.3561
136 H34 -0.9157 -0.3378 0.5486 H 1 LGD 0.2887
137 H35 -2.9059 -1.8607 -3.4152 H 1 LGD 0.0747
138 H36 -2.1658 -3.0441 -4.4587 H 1 LGD 0.0747
139 H37 -3.2456 -3.5826 -3.1753 H 1 LGD 0.0747
140 H38 3.7090 -4.0351 1.0144 H 1 LGD 0.1161
141 H39 2.5278 -5.0296 0.1874 H 1 LGD 0.1161
142 H40 2.8872 -5.6602 2.8477 H 1 LGD 0.3503
143 H41 1.5526 -5.0586 3.8081 H 1 LGD 0.3503
144 H42 -0.3060 2.8293 -0.8476 H 1 LGD 0.0827
145 H43 -1.9220 2.7689 -1.5475 H 1 LGD 0.0827
146 H44 -0.3404 -1.0992 -4.9069 H 1 LGD 0.2002
147 H45 -3.5418 0.0912 3.2792 H 1 LGD 0.1107
148 H46 -4.5170 -2.0431 1.5755 H 1 LGD 0.1079
149 H47 -3.4536 -1.9336 5.1141 H 1 LGD 0.0692
150 H48 -3.9353 -4.1888 6.0036 H 1 LGD 0.1078
151 H49 -3.5417 -5.5597 3.9095 H 1 LGD 0.0998
152 H50 -4.8954 -4.3497 2.2949 H 1 LGD 0.0930
153 H51 -6.4245 -2.1395 5.8474 H 1 LGD 0.0728
154 H52 -5.0808 -2.0271 7.0000 H 1 LGD 0.0728
155 H53 -5.6269 -0.1250 4.9382 H 1 LGD 0.4089
156 H54 -6.1717 -3.9247 4.2969 H 1 LGD 0.4151
157 H55 -1.8915 -3.3368 3.6066 H 1 LGD 0.4231
158 H56 -2.5506 -6.2321 2.0703 H 1 LGD 0.1109
159 H57 -5.4254 -6.6281 -0.8453 H 1 LGD 0.1179
160 H58 -3.8090 -7.9484 -1.6451 H 1 LGD 0.0848
161 H59 -1.2099 -7.1223 -1.5710 H 1 LGD 0.0764
162 H60 -1.7896 -4.9527 -0.5601 H 1 LGD 0.0387
163 H61 -3.7372 -4.0841 -1.0135 H 1 LGD 0.0491
164 H62 -4.9899 -4.6006 -2.1564 H 1 LGD 0.0491
165 H63 -2.8538 -7.0703 -3.3944 H 1 LGD 0.4289
166 H64 -0.3964 -5.1011 1.2701 H 1 LGD 0.4161
167 H65 0.3058 1.5917 5.5685 H 1 LGD 0.0913
168 H66 1.6687 0.1913 3.8838 H 1 LGD 0.2635
169 H67 0.1282 -0.9622 2.1343 H 1 LGD 0.1705
170 H68 4.6659 -2.9633 -4.5146 H 1 LGD 0.2320
171 H69 4.8289 0.6139 -1.5609 H 1 LGD 0.2579
172 H70 -2.0514 -10.4765 1.2409 H 1 LGD 0.3442
173 H71 -1.9101 -11.5115 -0.1674 H 1 LGD 0.3442
174 H72 -5.4093 -4.1700 0.6233 H 1 LGD 0.4008
175 H73 6.8207 1.2978 -0.5013 H 1 LGD 0.0880
176 H74 7.6211 -0.1949 -1.0246 H 1 LGD 0.0880
177 H75 8.5842 1.7879 -2.1619 H 1 LGD 0.1100
178 H76 7.8610 0.7085 -3.3428 H 1 LGD 0.1100
179 H77 6.3846 3.1583 -2.2101 H 1 LGD 0.1093
180 H78 7.4040 3.2288 -3.6602 H 1 LGD 0.1093
181 H79 5.0822 1.4611 -3.3307 H 1 LGD 0.4477
182 H80 5.4829 3.8689 -4.9560 H 1 LGD 0.1253
183 H81 3.1505 1.8609 -4.8852 H 1 LGD 0.0806
184 H82 3.1622 3.3884 -5.7937 H 1 LGD 0.0806
185 H83 4.2995 2.0944 -6.2212 H 1 LGD 0.0806
186 H84 3.1799 2.1887 -2.4289 H 1 LGD 0.1433
187 H85 2.0643 3.4369 -0.6015 H 1 LGD 0.1464
188 H86 2.3995 5.8924 -0.3736 H 1 LGD 0.1723
189 H87 3.8534 7.0988 -1.9960 H 1 LGD 0.1464
190 H88 4.9700 5.8561 -3.8334 H 1 LGD 0.1433
191 H89 2.0659 -0.9027 -0.2304 H 1 LGD 0.4681
192 H90 4.0464 1.1545 -0.3777 H 1 LGD 0.4749
193 H91 6.0408 1.5586 -4.6563 H 1 LGD 0.4477
@BOND
1 1 2 1
2 2 3 am
3 1 4 1
4 4 5 1
5 4 6 1
6 2 7 2
7 3 8 1
8 9 10 1
9 10 11 am
10 10 12 2
11 11 13 1
12 13 14 1
13 14 15 1
14 14 16 1
15 15 17 1
16 17 18 am
17 17 19 2
18 15 20 1
19 13 21 1
20 22 23 ar
21 23 24 ar
22 24 25 ar
23 25 26 ar
24 26 27 ar
25 22 27 ar
26 27 28 1
27 23 29 1
28 25 30 1
29 28 31 1
30 31 32 1
31 32 33 1
32 33 34 1
33 33 35 1
34 34 36 am
35 34 37 2
36 30 38 2
37 30 39 am
38 24 40 1
39 41 42 1
40 28 41 1
41 42 43 am
42 42 44 2
43 9 39 1
44 1 18 1
45 8 45 1
46 45 46 1
47 46 47 1
48 47 48 1
49 48 49 2
50 49 50 1
51 46 50 2
52 9 51 1
53 52 53 1
54 53 54 1
55 54 55 1
56 55 56 1
57 56 57 1
58 57 58 1
59 53 58 1
60 55 59 1
61 59 60 1
62 56 61 1
63 57 62 1
64 58 63 1
65 63 64 1
66 64 65 1
67 65 66 1
68 66 67 1
69 67 68 1
70 68 69 1
71 64 69 1
72 66 70 1
73 67 71 1
74 68 72 1
75 69 73 1
76 51 74 1
77 74 75 1
78 75 76 2
79 76 77 1
80 77 78 1
81 74 78 2
82 51 52 1
83 79 80 1
84 49 80 1
85 79 81 1
86 81 82 2
87 82 83 1
88 80 83 2
89 82 84 1
90 84 85 am
91 84 86 2
92 72 87 1
93 87 88 am
94 87 89 2
95 70 90 1
96 85 91 1
97 91 92 1
98 92 93 1
99 93 94 1
100 94 95 1
101 95 96 1
102 95 97 1
103 96 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 101 102 ar
108 96 102 ar
109 1 103 1
110 3 104 1
111 4 105 1
112 5 106 1
113 6 107 1
114 6 108 1
115 6 109 1
116 8 110 1
117 8 111 1
118 9 112 1
119 11 113 1
120 13 114 1
121 14 115 1
122 15 116 1
123 16 117 1
124 18 118 1
125 20 119 1
126 20 120 1
127 20 121 1
128 21 122 1
129 21 123 1
130 21 124 1
131 28 125 1
132 29 126 1
133 29 127 1
134 31 128 1
135 32 129 1
136 32 130 1
137 33 131 1
138 35 132 1
139 35 133 1
140 36 134 1
141 36 135 1
142 39 136 1
143 40 137 1
144 40 138 1
145 40 139 1
146 41 140 1
147 41 141 1
148 43 142 1
149 43 143 1
150 45 144 1
151 45 145 1
152 48 146 1
153 51 147 1
154 53 148 1
155 55 149 1
156 56 150 1
157 57 151 1
158 58 152 1
159 59 153 1
160 59 154 1
161 60 155 1
162 61 156 1
163 62 157 1
164 64 158 1
165 66 159 1
166 67 160 1
167 68 161 1
168 69 162 1
169 70 163 1
170 70 164 1
171 71 165 1
172 73 166 1
173 76 167 1
174 77 168 1
175 78 169 1
176 81 170 1
177 85 171 1
178 88 172 1
179 88 173 1
180 90 174 1
181 91 175 1
182 91 176 1
183 92 177 1
184 92 178 1
185 93 179 1
186 93 180 1
187 94 181 1
188 95 182 1
189 97 183 1
190 97 184 1
191 97 185 1
192 98 186 1
193 99 187 1
194 100 188 1
195 101 189 1
196 102 190 1
197 31 191 1
198 35 192 1
199 94 193 1