@COMMENT
LIGANDBOX_ID = D08336-14
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08336
NAME = Peplomycin_(INN)_PEP
MOLECULAR_FORMULA = C61H88N18O21S2
MOLECULAR_WEIGHT = 1473.610
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 26
NUM_OF_ACCEPTOR = 26
NUM_OF_CHIRAL_ATOMS = 20
TPSA = 639.1000
HOMO = -14.6368
LUMO = -9.9810
mLOGS = -0.529
mLOGD = -2.122
mLOGPA = -8.954
@MOLECULE
D08336-14
193 199 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.9489 7.2444 -0.9349 C.3 1 LGD 0.0727
2 C2 -1.8839 5.9429 -1.7526 C.2 1 LGD 0.6404
3 N1 -0.6745 5.2682 -1.8466 N.am 1 LGD -0.6155
4 C3 -0.9160 8.3054 -1.4177 C.3 1 LGD 0.1306
5 O1 0.4185 7.9243 -1.0745 O.3 1 LGD -0.6574
6 C4 -1.2147 9.7016 -0.8255 C.3 1 LGD -0.1315
7 O2 -2.8719 5.4900 -2.3051 O.2 1 LGD -0.5422
8 C5 -0.5032 4.0394 -2.6294 C.3 1 LGD 0.1228
9 C6 -2.8562 0.2809 1.2416 C.3 1 LGD 0.0269
10 C7 -2.7486 1.8139 1.1492 C.2 1 LGD 0.6444
11 N2 -1.6247 2.4536 1.6588 N.am 1 LGD -0.6238
12 O3 -3.6306 2.4747 0.6285 O.2 1 LGD -0.5214
13 C8 -1.4696 3.9139 1.6825 C.3 1 LGD 0.0799
14 C9 -2.4045 4.5396 2.7720 C.3 1 LGD 0.1397
15 C10 -2.4450 6.1013 2.7543 C.3 1 LGD -0.1120
16 O4 -2.0287 4.0708 4.0694 O.3 1 LGD -0.5948
17 C11 -2.7941 6.6146 1.3467 C.2 1 LGD 0.6519
18 N3 -1.7507 6.9441 0.4937 N.am 1 LGD -0.6113
19 O5 -3.9468 6.7538 0.9734 O.2 1 LGD -0.5310
20 C12 -3.4384 6.6643 3.8066 C.3 1 LGD -0.0770
21 C13 0.0320 4.2345 1.9014 C.3 1 LGD -0.0919
22 N4 0.9542 -3.8092 -1.9996 N.ar 1 LGD -0.7545
23 C14 -0.2030 -3.8478 -2.6776 C.ar 1 LGD 0.6989
24 C15 -1.3095 -3.0311 -2.3332 C.ar 1 LGD -0.2873
25 C16 -1.1525 -2.2060 -1.1853 C.ar 1 LGD 0.4546
26 N5 0.0264 -2.1664 -0.5329 N.ar 1 LGD -0.7929
27 C17 1.0209 -2.9646 -0.9617 C.ar 1 LGD 0.6314
28 C18 2.3900 -2.8257 -0.2756 C.3 1 LGD 0.1298
29 N6 -0.2497 -4.7162 -3.7335 N.pl3 1 LGD -0.9277
30 C19 -2.2533 -1.3463 -0.5892 C.2 1 LGD 0.5783
31 N7 2.4591 -1.5164 0.4158 N.4 1 LGD -0.7620
32 C20 3.8147 -1.1468 0.8627 C.3 1 LGD 0.1006
33 C21 3.7869 0.2918 1.4311 C.3 1 LGD 0.0071
34 C22 5.1485 0.6835 2.0291 C.2 1 LGD 0.6222
35 N8 3.4215 1.2428 0.3568 N.4 1 LGD -0.8338
36 N9 5.2464 1.8346 2.7805 N.am 1 LGD -0.6575
37 O6 6.1555 0.0191 1.8688 O.2 1 LGD -0.4906
38 O7 -3.4332 -1.5142 -0.8486 O.2 1 LGD -0.5227
39 N10 -1.8940 -0.3590 0.3251 N.am 1 LGD -0.5717
40 C23 -2.5974 -3.0324 -3.1709 C.3 1 LGD -0.0478
41 C24 2.7067 -4.0016 0.6991 C.3 1 LGD -0.1870
42 C25 1.8543 -4.0558 1.9745 C.2 1 LGD 0.6436
43 N11 2.1744 -4.9714 2.9508 N.am 1 LGD -0.6438
44 O8 0.9062 -3.3230 2.1808 O.2 1 LGD -0.6282
45 C26 -0.8344 2.8027 -1.7677 C.3 1 LGD -0.1529
46 C27 -0.4650 1.5319 -2.4732 C.ar 1 LGD 0.4609
47 S1 -1.5416 0.7107 -3.6092 S.3 1 LGD 0.0010
48 C28 -0.2414 -0.4023 -4.0220 C.ar 1 LGD -0.1760
49 C29 0.8475 -0.0620 -3.2642 C.ar 1 LGD 0.2445
50 N12 0.7338 0.9907 -2.4029 N.ar 1 LGD -0.7268
51 C30 -2.6844 -0.2627 2.6999 C.3 1 LGD 0.1026
52 O9 -2.7402 -1.7075 2.6924 O.3 1 LGD -0.4511
53 C31 -4.0399 -2.3151 2.5140 C.3 1 LGD 0.3390
54 O10 -4.9053 -1.9494 3.6176 O.3 1 LGD -0.4488
55 C32 -4.4341 -2.3272 4.9351 C.3 1 LGD 0.0513
56 C33 -4.3688 -3.8799 5.0064 C.3 1 LGD 0.1056
57 C34 -3.4542 -4.4353 3.8819 C.3 1 LGD 0.0907
58 C35 -3.8937 -3.8652 2.4955 C.3 1 LGD 0.1006
59 C36 -5.3853 -1.7101 5.9879 C.3 1 LGD 0.1474
60 O11 -5.3863 -0.2897 5.8757 O.3 1 LGD -0.5859
61 O12 -5.6778 -4.4374 4.8719 O.3 1 LGD -0.5747
62 O13 -2.0903 -4.1026 4.1545 O.3 1 LGD -0.6040
63 O14 -2.9335 -4.2265 1.4764 O.3 1 LGD -0.4704
64 C37 -2.8432 -5.6306 1.1505 C.3 1 LGD 0.3090
65 O15 -4.1191 -6.0990 0.6359 O.3 1 LGD -0.4018
66 C38 -4.3413 -5.8377 -0.7599 C.3 1 LGD 0.0577
67 C39 -3.3981 -6.7933 -1.5785 C.3 1 LGD 0.1095
68 C40 -2.0095 -6.9995 -0.8600 C.3 1 LGD 0.2099
69 C41 -1.7256 -5.8009 0.0776 C.3 1 LGD 0.1317
70 C42 -5.8543 -5.9937 -1.0514 C.3 1 LGD 0.1297
71 O16 -4.0217 -8.0528 -1.8572 O.3 1 LGD -0.5630
72 O17 -2.0225 -8.1925 -0.0324 O.3 1 LGD -0.4216
73 O18 -0.4439 -5.8841 0.6973 O.3 1 LGD -0.5963
74 C43 -1.3893 0.1336 3.3757 C.ar 1 LGD 0.3429
75 N13 -1.3441 0.9435 4.4573 N.ar 1 LGD -0.6194
76 C44 -0.0674 1.0602 4.7566 C.ar 1 LGD 0.4421
77 N14 0.7038 0.3243 3.8518 N.ar 1 LGD -0.3802
78 C45 -0.1628 -0.2797 2.9457 C.ar 1 LGD -0.2894
79 S2 2.3110 -2.1518 -4.5986 S.3 1 LGD -0.0247
80 C46 2.0568 -0.8200 -3.4703 C.ar 1 LGD 0.4188
81 C47 3.9928 -2.2196 -4.0754 C.ar 1 LGD -0.0720
82 C48 4.2078 -1.2268 -3.1511 C.ar 1 LGD 0.2021
83 N15 3.1330 -0.4583 -2.8024 N.ar 1 LGD -0.7714
84 C49 5.5533 -0.9687 -2.5991 C.2 1 LGD 0.5616
85 N16 5.6911 0.1289 -1.7630 N.am 1 LGD -0.6491
86 O19 6.5270 -1.6482 -2.8755 O.2 1 LGD -0.4888
87 C50 -1.7046 -9.4122 -0.5602 C.2 1 LGD 0.7637
88 N17 -1.8295 -10.5190 0.2457 N.am 1 LGD -0.6650
89 O20 -1.3098 -9.5802 -1.7008 O.2 1 LGD -0.5937
90 O21 -6.1436 -5.6670 -2.4102 O.3 1 LGD -0.5819
91 C51 6.9936 0.6673 -1.3577 C.3 1 LGD 0.0954
92 C52 7.6677 1.4504 -2.5150 C.3 1 LGD -0.1425
93 C53 6.8255 2.6383 -3.0415 C.3 1 LGD 0.1011
94 N18 5.7116 2.1456 -3.8791 N.4 1 LGD -0.7484
95 C54 4.8833 3.2504 -4.4010 C.3 1 LGD 0.1753
96 C55 4.2043 3.9929 -3.2529 C.ar 1 LGD -0.1512
97 C56 3.8492 2.6591 -5.3819 C.3 1 LGD -0.1262
98 C57 3.3813 3.3147 -2.3347 C.ar 1 LGD -0.1197
99 C58 2.7494 4.0167 -1.2971 C.ar 1 LGD -0.1304
100 C59 2.9348 5.4009 -1.1675 C.ar 1 LGD -0.0791
101 C60 3.7562 6.0828 -2.0782 C.ar 1 LGD -0.1304
102 C61 4.3899 5.3806 -3.1166 C.ar 1 LGD -0.1197
103 H1 -2.9525 7.6606 -1.0919 H 1 LGD 0.1418
104 H2 0.1320 5.6808 -1.3999 H 1 LGD 0.3150
105 H3 -0.9992 8.3851 -2.5093 H 1 LGD 0.0555
106 H4 0.9982 8.6698 -1.3116 H 1 LGD 0.4239
107 H5 -2.2315 10.0221 -1.0856 H 1 LGD 0.0607
108 H6 -1.1297 9.6962 0.2688 H 1 LGD 0.0607
109 H7 -0.5167 10.4492 -1.2228 H 1 LGD 0.0607
110 H8 -1.1436 4.0566 -3.5207 H 1 LGD 0.0575
111 H9 0.5381 3.9795 -2.9692 H 1 LGD 0.0575
112 H10 -3.8797 0.0464 0.9250 H 1 LGD 0.1397
113 H11 -0.9006 1.8877 2.0764 H 1 LGD 0.2903
114 H12 -1.7612 4.2951 0.6968 H 1 LGD 0.0872
115 H13 -3.4262 4.1979 2.5629 H 1 LGD 0.0832
116 H14 -1.4474 6.4836 3.0059 H 1 LGD 0.0488
117 H15 -2.0061 3.0971 4.0311 H 1 LGD 0.4177
118 H16 -0.8060 6.9021 0.8475 H 1 LGD 0.3066
119 H17 -4.4490 6.2658 3.6497 H 1 LGD 0.0618
120 H18 -3.1241 6.4056 4.8256 H 1 LGD 0.0618
121 H19 -3.4891 7.7587 3.7422 H 1 LGD 0.0618
122 H20 0.6472 3.7342 1.1463 H 1 LGD 0.0244
123 H21 0.2253 5.3110 1.8242 H 1 LGD 0.0244
124 H22 0.3752 3.8928 2.8860 H 1 LGD 0.0244
125 H23 3.1530 -2.8246 -1.0562 H 1 LGD 0.1161
126 H24 -0.9848 -4.6030 -4.4138 H 1 LGD 0.4598
127 H25 0.6250 -5.1245 -4.0273 H 1 LGD 0.4598
128 H26 1.8259 -1.5515 1.2057 H 1 LGD 0.4681
129 H27 4.1431 -1.8432 1.6376 H 1 LGD 0.1558
130 H28 4.5099 -1.2064 0.0231 H 1 LGD 0.1558
131 H29 3.0472 0.3519 2.2318 H 1 LGD 0.1332
132 H30 3.3853 2.1821 0.7286 H 1 LGD 0.4747
133 H31 2.5207 1.0156 -0.0406 H 1 LGD 0.4747
134 H32 4.4332 2.4040 2.9610 H 1 LGD 0.3563
135 H33 6.1398 2.0914 3.1757 H 1 LGD 0.3563
136 H34 -0.9089 -0.2064 0.4821 H 1 LGD 0.2889
137 H35 -2.9658 -2.0122 -3.3321 H 1 LGD 0.0727
138 H36 -2.4591 -3.4632 -4.1690 H 1 LGD 0.0727
139 H37 -3.3926 -3.6001 -2.6764 H 1 LGD 0.0727
140 H38 3.7607 -3.9567 0.9990 H 1 LGD 0.1170
141 H39 2.5853 -4.9554 0.1701 H 1 LGD 0.1170
142 H40 2.9536 -5.6002 2.8252 H 1 LGD 0.3509
143 H41 1.6165 -5.0137 3.7913 H 1 LGD 0.3509
144 H42 -0.2899 2.8604 -0.8197 H 1 LGD 0.0820
145 H43 -1.9039 2.8025 -1.5246 H 1 LGD 0.0820
146 H44 -0.3749 -1.1745 -4.7682 H 1 LGD 0.1994
147 H45 -3.5059 0.1344 3.3101 H 1 LGD 0.1107
148 H46 -4.4820 -1.9779 1.5698 H 1 LGD 0.1036
149 H47 -3.4301 -1.9189 5.1090 H 1 LGD 0.0693
150 H48 -3.9485 -4.1755 5.9763 H 1 LGD 0.1085
151 H49 -3.5606 -5.5274 3.8703 H 1 LGD 0.0993
152 H50 -4.8749 -4.2834 2.2373 H 1 LGD 0.0978
153 H51 -6.4027 -2.0942 5.8411 H 1 LGD 0.0730
154 H52 -5.0556 -2.0049 6.9920 H 1 LGD 0.0730
155 H53 -5.5804 -0.0821 4.9445 H 1 LGD 0.4078
156 H54 -6.1605 -3.8794 4.2365 H 1 LGD 0.4137
157 H55 -1.8735 -3.3352 3.5924 H 1 LGD 0.4217
158 H56 -2.5872 -6.2096 2.0452 H 1 LGD 0.1170
159 H57 -4.0714 -4.7957 -0.9694 H 1 LGD 0.0435
160 H58 -3.1960 -6.2908 -2.5327 H 1 LGD 0.0199
161 H59 -1.2080 -7.0588 -1.6077 H 1 LGD 0.0835
162 H60 -1.7366 -4.9027 -0.5483 H 1 LGD 0.0216
163 H61 -6.1745 -7.0197 -0.8300 H 1 LGD 0.0788
164 H62 -6.4148 -5.3248 -0.3861 H 1 LGD 0.0788
165 H63 -4.9454 -7.8899 -2.1139 H 1 LGD 0.4209
166 H64 -0.3576 -5.1028 1.2735 H 1 LGD 0.4147
167 H65 0.3602 1.6294 5.5718 H 1 LGD 0.0911
168 H66 1.7085 0.2289 3.8752 H 1 LGD 0.2630
169 H67 0.1526 -0.9174 2.1333 H 1 LGD 0.1713
170 H68 4.6868 -2.9304 -4.5052 H 1 LGD 0.2330
171 H69 4.8625 0.6672 -1.5744 H 1 LGD 0.2581
172 H70 -2.1552 -10.4134 1.1942 H 1 LGD 0.3406
173 H71 -1.6108 -11.4304 -0.1266 H 1 LGD 0.3406
174 H72 -5.4508 -6.0578 -2.9702 H 1 LGD 0.3945
175 H73 6.8520 1.3402 -0.5029 H 1 LGD 0.0874
176 H74 7.6509 -0.1504 -1.0338 H 1 LGD 0.0874
177 H75 8.6254 1.8406 -2.1486 H 1 LGD 0.1105
178 H76 7.9092 0.7701 -3.3418 H 1 LGD 0.1105
179 H77 6.4303 3.2159 -2.2034 H 1 LGD 0.1093
180 H78 7.4554 3.2908 -3.6494 H 1 LGD 0.1093
181 H79 5.1327 1.5220 -3.3352 H 1 LGD 0.4478
182 H80 5.5316 3.9364 -4.9504 H 1 LGD 0.1255
183 H81 3.2030 1.9236 -4.8863 H 1 LGD 0.0808
184 H82 3.2123 3.4535 -5.7910 H 1 LGD 0.0808
185 H83 4.3524 2.1626 -6.2209 H 1 LGD 0.0808
186 H84 3.2221 2.2469 -2.4328 H 1 LGD 0.1434
187 H85 2.1027 3.4907 -0.6046 H 1 LGD 0.1463
188 H86 2.4401 5.9451 -0.3678 H 1 LGD 0.1723
189 H87 3.8980 7.1558 -1.9833 H 1 LGD 0.1463
190 H88 5.0187 5.9180 -3.8212 H 1 LGD 0.1434
191 H89 2.1147 -0.8253 -0.2354 H 1 LGD 0.4681
192 H90 4.1209 1.2166 -0.3689 H 1 LGD 0.4747
193 H91 6.0941 1.6273 -4.6577 H 1 LGD 0.4478
@BOND
1 1 2 1
2 2 3 am
3 1 4 1
4 4 5 1
5 4 6 1
6 2 7 2
7 3 8 1
8 9 10 1
9 10 11 am
10 10 12 2
11 11 13 1
12 13 14 1
13 14 15 1
14 14 16 1
15 15 17 1
16 17 18 am
17 17 19 2
18 15 20 1
19 13 21 1
20 22 23 ar
21 23 24 ar
22 24 25 ar
23 25 26 ar
24 26 27 ar
25 22 27 ar
26 27 28 1
27 23 29 1
28 25 30 1
29 28 31 1
30 31 32 1
31 32 33 1
32 33 34 1
33 33 35 1
34 34 36 am
35 34 37 2
36 30 38 2
37 30 39 am
38 24 40 1
39 41 42 1
40 28 41 1
41 42 43 am
42 42 44 2
43 9 39 1
44 1 18 1
45 8 45 1
46 45 46 1
47 46 47 1
48 47 48 1
49 48 49 2
50 49 50 1
51 46 50 2
52 9 51 1
53 52 53 1
54 53 54 1
55 54 55 1
56 55 56 1
57 56 57 1
58 57 58 1
59 53 58 1
60 55 59 1
61 59 60 1
62 56 61 1
63 57 62 1
64 58 63 1
65 63 64 1
66 64 65 1
67 65 66 1
68 66 67 1
69 67 68 1
70 68 69 1
71 64 69 1
72 66 70 1
73 67 71 1
74 68 72 1
75 69 73 1
76 51 74 1
77 74 75 1
78 75 76 2
79 76 77 1
80 77 78 1
81 74 78 2
82 51 52 1
83 79 80 1
84 49 80 1
85 79 81 1
86 81 82 2
87 82 83 1
88 80 83 2
89 82 84 1
90 84 85 am
91 84 86 2
92 72 87 1
93 87 88 am
94 87 89 2
95 70 90 1
96 85 91 1
97 91 92 1
98 92 93 1
99 93 94 1
100 94 95 1
101 95 96 1
102 95 97 1
103 96 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 101 102 ar
108 96 102 ar
109 1 103 1
110 3 104 1
111 4 105 1
112 5 106 1
113 6 107 1
114 6 108 1
115 6 109 1
116 8 110 1
117 8 111 1
118 9 112 1
119 11 113 1
120 13 114 1
121 14 115 1
122 15 116 1
123 16 117 1
124 18 118 1
125 20 119 1
126 20 120 1
127 20 121 1
128 21 122 1
129 21 123 1
130 21 124 1
131 28 125 1
132 29 126 1
133 29 127 1
134 31 128 1
135 32 129 1
136 32 130 1
137 33 131 1
138 35 132 1
139 35 133 1
140 36 134 1
141 36 135 1
142 39 136 1
143 40 137 1
144 40 138 1
145 40 139 1
146 41 140 1
147 41 141 1
148 43 142 1
149 43 143 1
150 45 144 1
151 45 145 1
152 48 146 1
153 51 147 1
154 53 148 1
155 55 149 1
156 56 150 1
157 57 151 1
158 58 152 1
159 59 153 1
160 59 154 1
161 60 155 1
162 61 156 1
163 62 157 1
164 64 158 1
165 66 159 1
166 67 160 1
167 68 161 1
168 69 162 1
169 70 163 1
170 70 164 1
171 71 165 1
172 73 166 1
173 76 167 1
174 77 168 1
175 78 169 1
176 81 170 1
177 85 171 1
178 88 172 1
179 88 173 1
180 90 174 1
181 91 175 1
182 91 176 1
183 92 177 1
184 92 178 1
185 93 179 1
186 93 180 1
187 94 181 1
188 95 182 1
189 97 183 1
190 97 184 1
191 97 185 1
192 98 186 1
193 99 187 1
194 100 188 1
195 101 189 1
196 102 190 1
197 31 191 1
198 35 192 1
199 94 193 1