@COMMENT
LIGANDBOX_ID = D08386-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08386
NAME = Pirarubicin_hydrochloride_Pinorubin_(TN)_Therarubicin_(TN)
MOLECULAR_FORMULA = C32H37NO12
MOLECULAR_WEIGHT = 627.643
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 6
NUM_OF_ACCEPTOR = 12
NUM_OF_CHIRAL_ATOMS = 7
TPSA = 204.3000
HOMO = -10.9851
LUMO = -3.6326
mLOGPA = -5.877
mLOGS = 0.549
mLOGD = 0.568
@MOLECULE
D08386-03
83 88 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.0105 -2.0660 -5.1009 C.3 1 LGD 0.3462
2 O1 -0.9805 -1.0666 -5.4875 O.3 1 LGD -0.4152
3 C2 -2.3050 -1.2285 -4.9368 C.3 1 LGD 0.1384
4 C3 -2.8934 -2.5515 -5.4738 C.3 1 LGD -0.1159
5 C4 -1.9671 -3.7446 -5.1428 C.3 1 LGD -0.0711
6 C5 -0.5049 -3.4599 -5.5681 C.3 1 LGD -0.1084
7 C6 -3.3392 -0.8611 7.2860 C.ar 1 LGD -0.0722
8 C7 -2.3536 -1.8548 7.2501 C.ar 1 LGD -0.1943
9 C8 -1.1758 -1.6620 6.4960 C.ar 1 LGD 0.1973
10 C9 -0.9932 -0.4550 5.7725 C.ar 1 LGD -0.1619
11 C10 -2.0003 0.5319 5.8000 C.ar 1 LGD -0.0991
12 C11 -3.1651 0.3254 6.5644 C.ar 1 LGD -0.1150
13 C12 0.2620 -0.1878 4.9814 C.2 1 LGD 0.6068
14 C13 0.1740 0.8206 3.8564 C.ar 1 LGD -0.1914
15 C14 -0.8402 1.8031 3.8804 C.ar 1 LGD -0.1780
16 C15 -1.8412 1.8035 5.0165 C.2 1 LGD 0.6025
17 C16 1.0980 0.7979 2.7843 C.ar 1 LGD 0.1618
18 C17 1.0157 1.7381 1.7348 C.ar 1 LGD -0.0936
19 C18 0.0064 2.7289 1.7603 C.ar 1 LGD -0.0352
20 C19 -0.9075 2.7610 2.8376 C.ar 1 LGD 0.1583
21 C20 2.0252 1.6502 0.5825 C.3 1 LGD 0.2112
22 C21 2.0586 2.9141 -0.3151 C.3 1 LGD -0.1374
23 C22 0.6428 3.4465 -0.6618 C.3 1 LGD 0.0703
24 C23 -0.0950 3.7982 0.6562 C.3 1 LGD -0.0481
25 O2 -0.2054 -2.6468 6.4330 O.3 1 LGD -0.3400
26 C24 -0.2988 -3.9045 7.1241 C.3 1 LGD 0.1371
27 O3 1.3216 -0.7206 5.2695 O.2 1 LGD -0.5170
28 O4 -2.4999 2.7914 5.2994 O.2 1 LGD -0.5165
29 O5 -1.8742 3.7299 2.8575 O.3 1 LGD -0.4995
30 O6 2.0812 -0.1545 2.7470 O.3 1 LGD -0.5285
31 O7 1.6974 0.4830 -0.2106 O.3 1 LGD -0.4671
32 C25 2.7797 -0.0701 -0.9908 C.3 1 LGD 0.3564
33 C26 0.7188 4.6825 -1.6006 C.2 1 LGD 0.5441
34 C27 -0.6136 5.1817 -2.1966 C.3 1 LGD 0.0522
35 O8 -0.4632 6.4981 -2.7312 O.3 1 LGD -0.5815
36 O9 1.7792 5.2176 -1.8862 O.2 1 LGD -0.5058
37 O10 -0.0912 2.4269 -1.3375 O.3 1 LGD -0.6068
38 C28 2.7190 -1.6129 -0.9391 C.3 1 LGD -0.1312
39 C29 1.4830 -2.1543 -1.6877 C.3 1 LGD 0.1077
40 C30 1.4033 -1.5908 -3.1284 C.3 1 LGD 0.1127
41 C31 1.4639 -0.0293 -3.0780 C.3 1 LGD 0.1438
42 O11 2.6647 0.3550 -2.3651 O.3 1 LGD -0.4244
43 N1 1.5361 -3.6266 -1.7275 N.4 1 LGD -0.8165
44 C32 1.5482 0.6786 -4.4497 C.3 1 LGD -0.0906
45 O12 0.1434 -2.0605 -3.6652 O.3 1 LGD -0.4865
46 H1 0.9512 -1.8475 -5.5796 H 1 LGD 0.0827
47 H2 -2.2677 -1.2470 -3.8399 H 1 LGD 0.0624
48 H3 -2.9409 -0.3894 -5.2447 H 1 LGD 0.0624
49 H4 -3.8882 -2.7189 -5.0421 H 1 LGD 0.0628
50 H5 -3.0232 -2.4747 -6.5612 H 1 LGD 0.0628
51 H6 -2.0012 -3.9412 -4.0635 H 1 LGD 0.0441
52 H7 -2.3324 -4.6496 -5.6450 H 1 LGD 0.0441
53 H8 0.1571 -4.2424 -5.1763 H 1 LGD 0.0547
54 H9 -0.4339 -3.5081 -6.6624 H 1 LGD 0.0547
55 H10 -4.2437 -1.0144 7.8681 H 1 LGD 0.1526
56 H11 -2.5211 -2.7684 7.8114 H 1 LGD 0.1503
57 H12 -3.9450 1.0815 6.5938 H 1 LGD 0.1621
58 H13 3.0254 1.5236 1.0174 H 1 LGD 0.0717
59 H14 2.6087 3.6982 0.2218 H 1 LGD 0.0836
60 H15 2.6298 2.7210 -1.2314 H 1 LGD 0.0836
61 H16 0.3123 4.7396 1.0474 H 1 LGD 0.0842
62 H17 -1.1487 3.9965 0.4244 H 1 LGD 0.0842
63 H18 -0.3684 -3.7406 8.2067 H 1 LGD 0.0481
64 H19 -1.1810 -4.4616 6.7847 H 1 LGD 0.0481
65 H20 0.5944 -4.5075 6.9194 H 1 LGD 0.0481
66 H21 -2.3650 3.6469 3.6973 H 1 LGD 0.4667
67 H22 2.0607 -0.6356 3.5964 H 1 LGD 0.4657
68 H23 3.7418 0.2639 -0.5840 H 1 LGD 0.1121
69 H24 -0.9201 4.4809 -2.9832 H 1 LGD 0.0769
70 H25 -1.3858 5.1801 -1.4192 H 1 LGD 0.0769
71 H26 0.3838 6.5181 -3.2124 H 1 LGD 0.4212
72 H27 0.2083 1.5776 -0.9624 H 1 LGD 0.4258
73 H28 3.6346 -2.0197 -1.3875 H 1 LGD 0.0792
74 H29 2.6996 -1.9449 0.1068 H 1 LGD 0.0792
75 H30 0.5850 -1.8490 -1.1461 H 1 LGD 0.1382
76 H31 2.2430 -1.9813 -3.7183 H 1 LGD 0.0589
77 H32 0.5799 0.3400 -2.5474 H 1 LGD 0.0827
78 H33 2.3680 -3.9250 -2.2162 H 1 LGD 0.4578
79 H34 0.7208 -3.9729 -2.2142 H 1 LGD 0.4578
80 H35 0.5598 0.7719 -4.9100 H 1 LGD 0.0659
81 H36 1.9364 1.6982 -4.3302 H 1 LGD 0.0659
82 H37 2.2117 0.1395 -5.1372 H 1 LGD 0.0659
83 H38 1.5483 -3.9933 -0.7862 H 1 LGD 0.4578
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 7 8 ar
8 8 9 ar
9 9 10 ar
10 10 11 ar
11 11 12 ar
12 7 12 ar
13 10 13 1
14 13 14 1
15 14 15 ar
16 15 16 1
17 11 16 1
18 14 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 15 20 ar
23 18 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 19 24 1
28 9 25 1
29 25 26 1
30 13 27 2
31 16 28 2
32 20 29 1
33 17 30 1
34 31 32 1
35 21 31 1
36 23 33 1
37 33 34 1
38 34 35 1
39 33 36 2
40 23 37 1
41 32 38 1
42 38 39 1
43 39 40 1
44 40 41 1
45 41 42 1
46 32 42 1
47 39 43 1
48 41 44 1
49 40 45 1
50 1 45 1
51 1 46 1
52 3 47 1
53 3 48 1
54 4 49 1
55 4 50 1
56 5 51 1
57 5 52 1
58 6 53 1
59 6 54 1
60 7 55 1
61 8 56 1
62 12 57 1
63 21 58 1
64 22 59 1
65 22 60 1
66 24 61 1
67 24 62 1
68 26 63 1
69 26 64 1
70 26 65 1
71 29 66 1
72 30 67 1
73 32 68 1
74 34 69 1
75 34 70 1
76 35 71 1
77 37 72 1
78 38 73 1
79 38 74 1
80 39 75 1
81 40 76 1
82 41 77 1
83 43 78 1
84 43 79 1
85 44 80 1
86 44 81 1
87 44 82 1
88 43 83 1