@COMMENT
LIGANDBOX_ID = D08479-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08479
NAME = Rifampicin_sodium_Rifadine_(TN)
MOLECULAR_FORMULA = C43H58N4O12
MOLECULAR_WEIGHT = 822.953
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 6
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 220.1500
HOMO = -9.9639
LUMO = -3.9290
mLOGPA = -5.913
mLOGS = -2.340
mLOGD = 1.852
@MOLECULE
D08479-01
118 122 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 2.3140 -0.0830 4.2750 C.3 1 LGD 0.1610
2 C2 3.7390 -0.4360 3.7040 C.3 1 LGD -0.1051
3 O1 2.2970 2.9500 3.8540 O.3 1 LGD -0.6038
4 C3 2.9800 2.3640 4.9660 C.3 1 LGD 0.1484
5 C4 2.2880 1.0210 5.3990 C.3 1 LGD -0.0829
6 C5 4.0330 4.5700 5.5590 C.2 1 LGD -0.1479
7 C6 3.1490 3.4470 6.0880 C.3 1 LGD -0.0670
8 C7 7.3680 3.6460 3.0420 C.2 1 LGD 0.6621
9 C8 7.1660 5.0140 3.6360 C.2 1 LGD -0.1793
10 C9 6.1880 5.3310 4.5310 C.2 1 LGD -0.0545
11 C10 5.2990 4.3500 5.1510 C.2 1 LGD -0.1620
12 C11 3.7540 2.8810 7.4000 C.3 1 LGD -0.0845
13 C12 0.8430 1.2450 5.9270 C.3 1 LGD -0.0876
14 O2 1.4520 0.3070 3.2030 O.3 1 LGD -0.6006
15 C13 8.1470 6.0890 3.1730 C.3 1 LGD -0.0645
16 O3 6.4740 2.8150 3.0200 O.2 1 LGD -0.5564
17 N1 8.5980 3.2890 2.5000 N.am 1 LGD -0.5189
18 C14 3.6430 -1.5530 2.5910 C.3 1 LGD 0.1784
19 O4 2.9460 -2.7290 3.0960 O.3 1 LGD -0.4481
20 C15 4.9730 -1.9330 1.8410 C.3 1 LGD -0.1029
21 C16 8.9050 1.9520 2.2340 C.ar 1 LGD -0.0012
22 C17 8.8320 0.9690 3.2510 C.ar 1 LGD -0.1345
23 C18 9.2060 1.5910 0.9070 C.ar 1 LGD 0.0968
24 C19 9.3160 0.2190 0.5300 C.ar 1 LGD -0.0944
25 C20 9.1740 -0.7850 1.5390 C.ar 1 LGD 0.0310
26 C21 9.0180 -0.3910 2.8980 C.ar 1 LGD 0.1784
27 C22 9.5220 -0.1730 -0.8370 C.ar 1 LGD 0.2217
28 C23 9.5230 -1.5310 -1.2150 C.ar 1 LGD -0.1388
29 C24 9.3240 -2.4880 -0.2210 C.ar 1 LGD 0.2278
30 C25 9.1780 -2.1480 1.1160 C.ar 1 LGD -0.3250
31 O5 9.2810 2.6020 -0.0180 O.3 1 LGD -0.5204
32 O6 9.6940 0.7510 -1.8310 O.3 1 LGD -0.4743
33 C26 4.7610 -0.7430 4.8390 C.3 1 LGD -0.0881
34 C27 3.4860 -3.6880 3.9130 C.2 1 LGD 0.6411
35 C28 2.4350 -4.7240 4.2960 C.3 1 LGD -0.1517
36 O7 4.6470 -3.7450 4.2790 O.2 1 LGD -0.5385
37 C29 4.7920 -3.1100 0.8140 C.3 1 LGD 0.2103
38 O8 4.1830 -2.6330 -0.4060 O.3 1 LGD -0.4245
39 C30 6.1330 -3.7150 0.4550 C.2 1 LGD -0.2490
40 C31 5.6130 -0.6780 1.1760 C.3 1 LGD -0.0826
41 C32 2.7600 -2.8280 -0.5160 C.3 1 LGD 0.1221
42 C33 6.5500 -4.9190 0.8720 C.2 1 LGD 0.0431
43 O9 7.8280 -5.4110 0.7320 O.3 1 LGD -0.3093
44 O10 9.1560 -3.8300 -0.4770 O.3 1 LGD -0.3005
45 C34 8.9930 -4.5420 0.7670 C.3 1 LGD 0.2610
46 C35 8.8670 -3.4310 1.8230 C.2 1 LGD 0.5530
47 C36 10.2500 -5.4080 0.9840 C.3 1 LGD -0.0818
48 C37 9.6780 -1.9460 -2.6800 C.3 1 LGD -0.0303
49 O11 9.1430 -1.3090 3.9000 O.3 1 LGD -0.5149
50 O12 8.3170 -3.5670 2.9030 O.2 1 LGD -0.4921
51 C38 8.5430 1.4030 4.6690 C.2 1 LGD 0.4598
52 N2 8.0470 0.6070 5.5620 N.2 1 LGD -0.4187
53 N3 7.6370 0.9980 6.8090 N.pl3 1 LGD -0.4904
54 C39 7.3110 -0.1400 7.6870 C.3 1 LGD 0.1778
55 C40 6.5370 0.3320 8.9390 C.3 1 LGD 0.0887
56 N4 7.2450 1.4340 9.6280 N.4 1 LGD -0.6589
57 C41 7.5140 2.5830 8.7340 C.3 1 LGD 0.0887
58 C42 8.2860 2.1630 7.4590 C.3 1 LGD 0.1778
59 C43 6.5780 1.8370 10.8780 C.3 1 LGD 0.0984
60 H1 1.9120 -1.0010 4.7240 H 1 LGD 0.0682
61 H2 4.1050 0.4640 3.1970 H 1 LGD 0.0672
62 H3 2.7860 3.7560 3.6100 H 1 LGD 0.4192
63 H4 3.9920 2.0990 4.6420 H 1 LGD 0.0470
64 H5 2.8540 0.6080 6.2420 H 1 LGD 0.0405
65 H6 3.5690 5.5500 5.4620 H 1 LGD 0.1366
66 H7 2.1620 3.8630 6.3280 H 1 LGD 0.0773
67 H8 6.0660 6.3600 4.8650 H 1 LGD 0.1416
68 H9 5.7130 3.3510 5.2650 H 1 LGD 0.1357
69 H10 4.6670 2.3090 7.1940 H 1 LGD 0.0280
70 H11 4.0090 3.6950 8.0900 H 1 LGD 0.0280
71 H12 3.0450 2.2230 7.9160 H 1 LGD 0.0280
72 H13 0.3730 0.2870 6.1860 H 1 LGD 0.0428
73 H14 0.8430 1.8660 6.8310 H 1 LGD 0.0428
74 H15 0.2120 1.7390 5.1780 H 1 LGD 0.0428
75 H16 1.5180 1.2800 3.1450 H 1 LGD 0.4289
76 H17 8.2510 6.0870 2.0810 H 1 LGD 0.0503
77 H18 7.8180 7.0940 3.4670 H 1 LGD 0.0503
78 H19 9.1410 5.9270 3.6080 H 1 LGD 0.0503
79 H20 9.2330 4.0160 2.2070 H 1 LGD 0.3243
80 H21 3.0000 -1.1170 1.8180 H 1 LGD 0.0965
81 H22 5.7030 -2.2840 2.5780 H 1 LGD 0.0722
82 H23 8.9950 3.4290 0.4110 H 1 LGD 0.4445
83 H24 9.6150 1.6360 -1.4230 H 1 LGD 0.4602
84 H25 4.3640 -1.4830 5.5440 H 1 LGD 0.0342
85 H26 5.7150 -1.1120 4.4460 H 1 LGD 0.0342
86 H27 4.9960 0.1630 5.4100 H 1 LGD 0.0342
87 H28 1.6090 -4.2360 4.8280 H 1 LGD 0.0702
88 H29 2.0360 -5.2020 3.3930 H 1 LGD 0.0702
89 H30 2.8740 -5.4930 4.9440 H 1 LGD 0.0702
90 H31 4.1750 -3.9020 1.2580 H 1 LGD 0.0425
91 H32 6.7680 -3.0770 -0.1490 H 1 LGD 0.1419
92 H33 5.9950 0.0170 1.9330 H 1 LGD 0.0404
93 H34 6.4570 -0.9460 0.5320 H 1 LGD 0.0404
94 H35 4.8790 -0.1420 0.5600 H 1 LGD 0.0404
95 H36 2.5200 -3.8980 -0.4780 H 1 LGD 0.0350
96 H37 2.2240 -2.3190 0.2920 H 1 LGD 0.0350
97 H38 2.4040 -2.4270 -1.4730 H 1 LGD 0.0350
98 H39 5.9110 -5.5750 1.4600 H 1 LGD 0.1685
99 H40 11.1580 -4.7900 0.9700 H 1 LGD 0.0690
100 H41 10.2030 -5.9220 1.9520 H 1 LGD 0.0690
101 H42 10.3380 -6.1660 0.1960 H 1 LGD 0.0690
102 H43 8.8000 -1.6440 -3.2640 H 1 LGD 0.0567
103 H44 10.5610 -1.4760 -3.1320 H 1 LGD 0.0567
104 H45 9.7960 -3.0300 -2.7960 H 1 LGD 0.0567
105 H46 8.9300 -2.2000 3.5610 H 1 LGD 0.4675
106 H47 8.6460 2.4670 4.8690 H 1 LGD -0.0222
107 H48 6.7040 -0.8760 7.1440 H 1 LGD 0.0838
108 H49 8.2390 -0.6340 8.0030 H 1 LGD 0.0838
109 H50 5.5370 0.6650 8.6360 H 1 LGD 0.1085
110 H51 6.4150 -0.5190 9.6210 H 1 LGD 0.1085
111 H52 6.5650 3.0450 8.4340 H 1 LGD 0.1085
112 H53 8.0990 3.3430 9.2680 H 1 LGD 0.1085
113 H54 8.3090 3.0310 6.7910 H 1 LGD 0.0838
114 H55 9.3180 1.9050 7.7280 H 1 LGD 0.0838
115 H56 5.5820 2.2480 10.6660 H 1 LGD 0.1031
116 H57 6.4670 0.9730 11.5460 H 1 LGD 0.1031
117 H58 7.1700 2.6010 11.3970 H 1 LGD 0.1031
118 H59 8.2093 1.1888 9.7286 H 1 LGD 0.4421
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 1 5 1
5 6 7 1
6 4 7 1
7 8 9 1
8 9 10 2
9 10 11 1
10 6 11 2
11 7 12 1
12 5 13 1
13 1 14 1
14 9 15 1
15 8 16 2
16 8 17 am
17 2 18 1
18 18 19 1
19 18 20 1
20 17 21 1
21 21 22 ar
22 21 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 24 27 1
27 27 28 2
28 28 29 1
29 29 30 2
30 25 30 1
31 23 31 1
32 27 32 1
33 2 33 1
34 19 34 1
35 34 35 1
36 34 36 2
37 22 26 ar
38 20 37 1
39 37 38 1
40 37 39 1
41 20 40 1
42 38 41 1
43 39 42 2
44 42 43 1
45 29 44 1
46 44 45 1
47 43 45 1
48 30 46 1
49 45 46 1
50 45 47 1
51 28 48 1
52 26 49 1
53 46 50 2
54 22 51 1
55 51 52 2
56 52 53 1
57 53 54 1
58 54 55 1
59 55 56 1
60 56 57 1
61 57 58 1
62 53 58 1
63 56 59 1
64 1 60 1
65 2 61 1
66 3 62 1
67 4 63 1
68 5 64 1
69 6 65 1
70 7 66 1
71 10 67 1
72 11 68 1
73 12 69 1
74 12 70 1
75 12 71 1
76 13 72 1
77 13 73 1
78 13 74 1
79 14 75 1
80 15 76 1
81 15 77 1
82 15 78 1
83 17 79 1
84 18 80 1
85 20 81 1
86 31 82 1
87 32 83 1
88 33 84 1
89 33 85 1
90 33 86 1
91 35 87 1
92 35 88 1
93 35 89 1
94 37 90 1
95 39 91 1
96 40 92 1
97 40 93 1
98 40 94 1
99 41 95 1
100 41 96 1
101 41 97 1
102 42 98 1
103 47 99 1
104 47 100 1
105 47 101 1
106 48 102 1
107 48 103 1
108 48 104 1
109 49 105 1
110 51 106 1
111 54 107 1
112 54 108 1
113 55 109 1
114 55 110 1
115 57 111 1
116 57 112 1
117 58 113 1
118 58 114 1
119 59 115 1
120 59 116 1
121 59 117 1
122 56 118 1