@COMMENT
LIGANDBOX_ID = D08480-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08480
NAME = Rifamycin_sodium_(USAN)_Rifamycin_SV_sodium_salt_Aemcolo_(TN)_Otofa_(TN)_Rifocina_(TN)
MOLECULAR_FORMULA = C37H47NO12
MOLECULAR_WEIGHT = 697.778
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 6
NUM_OF_ACCEPTOR = 12
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 201.3100
HOMO = -8.0019
LUMO = -1.2458
mLOGD = 1.739
mLOGPA = -5.958
mLOGS = -2.431
@MOLECULE
D08480-02
97 100 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -4.0122 0.3484 -1.2014 C.3 1 LGD 0.1633
2 C2 -2.4589 0.0928 -1.2745 C.3 1 LGD -0.1063
3 O1 -4.4698 -0.3252 1.7306 O.3 1 LGD -0.6179
4 C3 -4.3646 -1.3655 0.7554 C.3 1 LGD 0.1449
5 C4 -4.8583 -0.8618 -0.6488 C.3 1 LGD -0.0837
6 C5 -4.3027 -3.0637 2.5919 C.2 1 LGD -0.1653
7 C6 -5.0432 -2.6575 1.3225 C.3 1 LGD -0.0648
8 C7 0.0330 -2.6381 2.9332 C.2 1 LGD 0.6759
9 C8 -0.8666 -3.2793 3.9641 C.2 1 LGD -0.1702
10 C9 -2.1894 -3.5862 3.8086 C.2 1 LGD -0.0531
11 C10 -2.9887 -3.3746 2.6008 C.2 1 LGD -0.1433
12 C11 -5.0675 -3.8340 0.3125 C.3 1 LGD -0.0833
13 C12 -6.3782 -0.5327 -0.6602 C.3 1 LGD -0.0847
14 O2 -4.2777 1.5133 -0.4184 O.3 1 LGD -0.6101
15 C13 -0.2107 -3.5505 5.3202 C.3 1 LGD -0.0659
16 O3 -0.3630 -2.3609 1.8139 O.2 1 LGD -0.5850
17 N1 1.3354 -2.2854 3.2832 N.am 1 LGD -0.4759
18 C14 -1.6626 1.3935 -1.6763 C.3 1 LGD 0.1800
19 O4 -2.1837 1.9707 -2.9079 O.3 1 LGD -0.4499
20 C15 -0.0886 1.3036 -1.6925 C.3 1 LGD -0.1168
21 C16 2.2462 -1.7188 2.3921 C.ar 1 LGD 0.0596
22 C17 2.3824 -2.2165 1.0911 C.ar 1 LGD -0.1146
23 C18 3.0289 -0.6223 2.8012 C.ar 1 LGD 0.0872
24 C19 3.8703 0.0639 1.8695 C.ar 1 LGD -0.0946
25 C20 3.9585 -0.4336 0.5284 C.ar 1 LGD 0.0163
26 C21 3.2250 -1.5969 0.1681 C.ar 1 LGD 0.1208
27 C22 4.5776 1.2646 2.2236 C.ar 1 LGD 0.2037
28 C23 5.2834 2.0095 1.2543 C.ar 1 LGD -0.2051
29 C24 5.3122 1.5214 -0.0517 C.ar 1 LGD 0.2053
30 C25 4.7262 0.3165 -0.4009 C.ar 1 LGD -0.3027
31 O5 2.8872 -0.1945 4.0942 O.3 1 LGD -0.5141
32 O6 4.5468 1.7733 3.4946 O.3 1 LGD -0.5174
33 C26 -2.1322 -1.1613 -2.1362 C.3 1 LGD -0.0875
34 C27 -1.9637 1.4989 -4.1763 C.2 1 LGD 0.6449
35 C28 -2.7137 2.3421 -5.2013 C.3 1 LGD -0.1506
36 O7 -1.2609 0.5510 -4.4791 O.2 1 LGD -0.5329
37 C29 0.5763 2.7098 -1.9296 C.3 1 LGD 0.2095
38 O8 0.9013 3.3660 -0.6768 O.3 1 LGD -0.4443
39 C30 1.8673 2.5700 -2.7242 C.2 1 LGD -0.2053
40 C31 0.4878 0.5869 -0.4354 C.3 1 LGD -0.0779
41 C32 -0.1796 3.9326 0.0847 C.3 1 LGD 0.1291
42 C33 3.0747 2.4115 -2.1748 C.2 1 LGD 0.0281
43 O9 4.2159 2.2540 -2.9185 O.3 1 LGD -0.3363
44 O10 5.7942 2.2257 -1.1350 O.3 1 LGD -0.3184
45 C34 5.3661 1.5678 -2.3540 C.3 1 LGD 0.2670
46 C35 4.9648 0.1725 -1.8643 C.2 1 LGD 0.5584
47 C36 6.5172 1.5822 -3.3833 C.3 1 LGD -0.0641
48 C37 5.9471 3.3451 1.6016 C.3 1 LGD -0.0465
49 O11 3.2502 -2.1337 -1.0842 O.3 1 LGD -0.5088
50 O12 5.1166 -0.8649 -2.4861 O.2 1 LGD -0.4898
51 H1 -4.3548 0.5408 -2.2264 H 1 LGD 0.0656
52 H2 -2.1227 -0.1355 -0.2574 H 1 LGD 0.0622
53 H3 -4.1734 -0.7030 2.5777 H 1 LGD 0.4160
54 H4 -3.3066 -1.6192 0.6379 H 1 LGD 0.0464
55 H5 -4.7232 -1.6826 -1.3624 H 1 LGD 0.0594
56 H6 -4.8668 -2.9869 3.5200 H 1 LGD 0.1219
57 H7 -6.0832 -2.4233 1.5849 H 1 LGD 0.0636
58 H8 -2.7477 -3.9858 4.6536 H 1 LGD 0.1308
59 H9 -2.4628 -3.4241 1.6524 H 1 LGD 0.1554
60 H10 -4.0680 -4.0275 -0.0970 H 1 LGD 0.0398
61 H11 -5.4199 -4.7515 0.8005 H 1 LGD 0.0398
62 H12 -5.7460 -3.6252 -0.5236 H 1 LGD 0.0398
63 H13 -6.6329 0.2265 0.0901 H 1 LGD 0.0391
64 H14 -6.6832 -0.1524 -1.6433 H 1 LGD 0.0391
65 H15 -6.9781 -1.4270 -0.4529 H 1 LGD 0.0391
66 H16 -4.4082 1.1984 0.4963 H 1 LGD 0.4275
67 H17 -0.8857 -4.0778 6.0060 H 1 LGD 0.0468
68 H18 0.6866 -4.1725 5.2096 H 1 LGD 0.0468
69 H19 0.0844 -2.6136 5.8098 H 1 LGD 0.0468
70 H20 1.5446 -2.2180 4.2679 H 1 LGD 0.3311
71 H21 -1.8985 2.1117 -0.8860 H 1 LGD 0.0829
72 H22 0.2083 0.6738 -2.5369 H 1 LGD 0.0798
73 H23 1.8186 -3.0915 0.7798 H 1 LGD 0.1718
74 H24 3.4480 0.5972 4.2008 H 1 LGD 0.4523
75 H25 5.0592 2.6008 3.4990 H 1 LGD 0.4573
76 H26 -1.0616 -1.2450 -2.3536 H 1 LGD 0.0404
77 H27 -2.4196 -2.0790 -1.6086 H 1 LGD 0.0404
78 H28 -2.6784 -1.1422 -3.0871 H 1 LGD 0.0404
79 H29 -2.3791 3.3853 -5.1431 H 1 LGD 0.0673
80 H30 -2.5313 1.9640 -6.2150 H 1 LGD 0.0673
81 H31 -3.7908 2.3084 -4.9954 H 1 LGD 0.0673
82 H32 -0.1005 3.3484 -2.5110 H 1 LGD 0.0529
83 H33 1.7525 2.5770 -3.8063 H 1 LGD 0.1416
84 H34 0.2688 -0.4877 -0.4583 H 1 LGD 0.0418
85 H35 1.5770 0.6936 -0.3919 H 1 LGD 0.0418
86 H36 0.0697 0.9949 0.4927 H 1 LGD 0.0418
87 H37 0.2272 4.5519 0.8935 H 1 LGD 0.0314
88 H38 -0.8138 4.5606 -0.5530 H 1 LGD 0.0314
89 H39 -0.7888 3.1451 0.5423 H 1 LGD 0.0314
90 H40 3.2148 2.4004 -1.0992 H 1 LGD 0.1402
91 H41 6.7863 2.6123 -3.6488 H 1 LGD 0.0687
92 H42 7.4084 1.0879 -2.9765 H 1 LGD 0.0687
93 H43 6.2240 1.0571 -4.3011 H 1 LGD 0.0687
94 H44 6.5034 3.7654 0.7548 H 1 LGD 0.0517
95 H45 5.1973 4.0882 1.9013 H 1 LGD 0.0517
96 H46 6.6594 3.2288 2.4281 H 1 LGD 0.0517
97 H47 3.9346 -1.6784 -1.6109 H 1 LGD 0.4534
@BOND
1 1 2 1
2 3 4 1
3 4 5 1
4 1 5 1
5 6 7 1
6 4 7 1
7 8 9 1
8 9 10 2
9 10 11 1
10 6 11 2
11 7 12 1
12 5 13 1
13 1 14 1
14 9 15 1
15 8 16 2
16 8 17 am
17 2 18 1
18 18 19 1
19 18 20 1
20 17 21 1
21 21 22 ar
22 21 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 24 27 ar
27 27 28 ar
28 28 29 ar
29 29 30 ar
30 25 30 ar
31 23 31 1
32 27 32 1
33 2 33 1
34 19 34 1
35 34 35 1
36 34 36 2
37 22 26 ar
38 20 37 1
39 37 38 1
40 37 39 1
41 20 40 1
42 38 41 1
43 39 42 2
44 42 43 1
45 29 44 1
46 44 45 1
47 43 45 1
48 30 46 1
49 45 46 1
50 45 47 1
51 28 48 1
52 26 49 1
53 46 50 2
54 1 51 1
55 2 52 1
56 3 53 1
57 4 54 1
58 5 55 1
59 6 56 1
60 7 57 1
61 10 58 1
62 11 59 1
63 12 60 1
64 12 61 1
65 12 62 1
66 13 63 1
67 13 64 1
68 13 65 1
69 14 66 1
70 15 67 1
71 15 68 1
72 15 69 1
73 17 70 1
74 18 71 1
75 20 72 1
76 22 73 1
77 31 74 1
78 32 75 1
79 33 76 1
80 33 77 1
81 33 78 1
82 35 79 1
83 35 80 1
84 35 81 1
85 37 82 1
86 39 83 1
87 40 84 1
88 40 85 1
89 40 86 1
90 41 87 1
91 41 88 1
92 41 89 1
93 42 90 1
94 47 91 1
95 47 92 1
96 47 93 1
97 48 94 1
98 48 95 1
99 48 96 1
100 49 97 1