@COMMENT
LIGANDBOX_ID = D08618-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08618
NAME = Topotecan_(BAN)_Hycamtin_(TN)
MOLECULAR_FORMULA = C23H23N3O5
MOLECULAR_WEIGHT = 421.453
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 103.2000
HOMO = -10.9581
LUMO = -4.6737
mLOGS = -1.743
mLOGD = 1.709
mLOGPA = -5.176
@MOLECULE
D08618-01
55 59 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 30.3210 -19.6230 0.0980 C.2 1 LGD 0.7342
2 C2 28.6940 -22.0700 0.0470 C.2 1 LGD -0.1024
3 C3 30.8910 -20.9950 0.1980 C.2 1 LGD -0.2380
4 O1 30.9790 -18.5970 0.1040 O.2 1 LGD -0.6046
5 C4 30.1370 -22.1610 0.1710 C.2 1 LGD 0.0102
6 C5 32.3880 -21.1450 0.2910 C.3 1 LGD 0.2099
7 C6 30.8210 -23.5160 0.2560 C.3 1 LGD 0.0973
8 O2 32.7210 -22.2260 1.1890 O.3 1 LGD -0.4163
9 C7 32.0880 -23.4460 1.1570 C.2 1 LGD 0.7230
10 C8 31.2390 -24.0160 -1.1630 C.3 1 LGD -0.0921
11 O3 29.9380 -24.4800 0.8450 O.3 1 LGD -0.5879
12 O4 32.4700 -24.3880 1.8310 O.2 1 LGD -0.5459
13 C9 30.0640 -24.1730 -2.1610 C.3 1 LGD -0.0864
14 C10 28.2010 -20.7900 -0.0370 C.2 1 LGD -0.0706
15 N1 28.9450 -19.6330 -0.0120 N.am 1 LGD -0.3541
16 C11 28.0540 -18.4550 -0.1470 C.3 1 LGD 0.1461
17 C12 26.8000 -20.4770 -0.1960 C.ar 1 LGD 0.4671
18 C13 26.6800 -19.1060 -0.2700 C.ar 1 LGD -0.1802
19 C14 25.4220 -18.5290 -0.4420 C.ar 1 LGD -0.1142
20 N2 25.7810 -21.3440 -0.2710 N.ar 1 LGD -0.5930
21 C15 24.5410 -20.8190 -0.4350 C.ar 1 LGD 0.3791
22 C16 24.3070 -19.4070 -0.5370 C.ar 1 LGD -0.0818
23 C17 22.9830 -18.9170 -0.7210 C.ar 1 LGD -0.2666
24 C18 21.9090 -19.8350 -0.7640 C.ar 1 LGD 0.1791
25 C19 22.1430 -21.2100 -0.6630 C.ar 1 LGD -0.1502
26 C20 23.4450 -21.6940 -0.5060 C.ar 1 LGD -0.0704
27 C21 22.6650 -17.4190 -0.8820 C.3 1 LGD 0.1618
28 N3 22.1180 -16.8080 0.3490 N.4 1 LGD -0.6611
29 C22 21.5890 -15.4520 0.1210 C.3 1 LGD 0.0797
30 C23 23.0300 -16.8680 1.5080 C.3 1 LGD 0.0797
31 O5 20.6200 -19.3990 -0.8940 O.3 1 LGD -0.4582
32 H1 28.0530 -22.9440 0.0090 H 1 LGD 0.1957
33 H2 32.7950 -21.3490 -0.7070 H 1 LGD 0.0885
34 H3 32.8480 -20.2180 0.6550 H 1 LGD 0.0885
35 H4 31.9740 -23.3280 -1.5970 H 1 LGD 0.0577
36 H5 31.7500 -24.9830 -1.0650 H 1 LGD 0.0577
37 H6 30.4970 -25.1890 1.2120 H 1 LGD 0.4409
38 H7 29.6070 -23.2030 -2.3910 H 1 LGD 0.0425
39 H8 30.4230 -24.6040 -3.1040 H 1 LGD 0.0425
40 H9 29.2870 -24.8370 -1.7610 H 1 LGD 0.0425
41 H10 28.1200 -17.8230 0.7480 H 1 LGD 0.0908
42 H11 28.3100 -17.8850 -1.0490 H 1 LGD 0.0908
43 H12 25.3390 -17.4500 -0.4880 H 1 LGD 0.1311
44 H13 21.3100 -21.9060 -0.7020 H 1 LGD 0.1801
45 H14 23.6070 -22.7660 -0.4280 H 1 LGD 0.1823
46 H15 23.5390 -16.8560 -1.2250 H 1 LGD 0.1075
47 H16 21.9290 -17.3190 -1.6900 H 1 LGD 0.1075
48 H17 20.8470 -15.4610 -0.6870 H 1 LGD 0.1057
49 H18 21.1010 -15.0750 1.0300 H 1 LGD 0.1057
50 H19 22.4000 -14.7640 -0.1530 H 1 LGD 0.1057
51 H20 23.9480 -16.3010 1.3060 H 1 LGD 0.1057
52 H21 22.5450 -16.4430 2.3960 H 1 LGD 0.1057
53 H22 23.3010 -17.9070 1.7360 H 1 LGD 0.1057
54 H23 20.6110 -18.4330 -0.7660 H 1 LGD 0.3932
55 H24 21.1989 -17.1676 0.5103 H 1 LGD 0.4328
@BOND
1 2 14 2
2 14 15 1
3 15 16 1
4 16 18 1
5 14 17 1
6 1 3 1
7 1 4 2
8 2 5 1
9 3 6 1
10 17 18 ar
11 18 19 ar
12 19 22 ar
13 20 21 ar
14 17 20 ar
15 5 7 1
16 6 8 1
17 7 9 1
18 7 10 1
19 7 11 1
20 9 12 2
21 21 22 ar
22 22 23 1
23 23 24 2
24 24 25 1
25 25 26 2
26 21 26 1
27 23 27 1
28 10 13 1
29 27 28 1
30 3 5 2
31 28 29 1
32 8 9 1
33 28 30 1
34 1 15 am
35 24 31 1
36 2 32 1
37 6 33 1
38 6 34 1
39 10 35 1
40 10 36 1
41 11 37 1
42 13 38 1
43 13 39 1
44 13 40 1
45 16 41 1
46 16 42 1
47 19 43 1
48 25 44 1
49 26 45 1
50 27 46 1
51 27 47 1
52 29 48 1
53 29 49 1
54 29 50 1
55 30 51 1
56 30 52 1
57 30 53 1
58 31 54 1
59 28 55 1