@COMMENT
LIGANDBOX_ID = D08618-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08618
NAME = Topotecan_(BAN)_Hycamtin_(TN)
MOLECULAR_FORMULA = C23H23N3O5
MOLECULAR_WEIGHT = 421.453
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 103.2000
HOMO = -10.9581
LUMO = -4.6737
mLOGS = -1.743
mLOGD = 1.709
mLOGPA = -5.176
@MOLECULE
D08618-02
55 59 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 3.6593 0.7376 -0.0523 C.2 1 LGD 0.7289
2 C2 2.0238 -1.7018 0.0290 C.2 1 LGD -0.1317
3 C3 4.2242 -0.6341 0.0784 C.2 1 LGD -0.2079
4 O1 4.3213 1.7600 -0.1010 O.2 1 LGD -0.5971
5 C4 3.4715 -1.8043 0.1301 C.2 1 LGD -0.0531
6 C5 5.7225 -0.7854 0.1243 C.3 1 LGD 0.2061
7 C6 4.1962 -3.1492 0.2599 C.3 1 LGD 0.1014
8 O2 6.0658 -1.7625 1.1238 O.3 1 LGD -0.4155
9 C7 5.4208 -2.9722 1.2244 C.2 1 LGD 0.7663
10 C8 3.2444 -4.3132 0.7338 C.3 1 LGD -0.0849
11 O3 4.7109 -3.5039 -1.0278 O.3 1 LGD -0.5741
12 O4 5.7712 -3.8021 2.0444 O.2 1 LGD -0.5279
13 C9 3.8535 -5.7430 0.7716 C.3 1 LGD -0.0892
14 C10 1.5356 -0.4224 -0.0929 C.2 1 LGD -0.0610
15 N1 2.2817 0.7305 -0.1213 N.am 1 LGD -0.3523
16 C11 1.3939 1.9075 -0.2778 C.3 1 LGD 0.1445
17 C12 0.1325 -0.1099 -0.2434 C.ar 1 LGD 0.4634
18 C13 0.0153 1.2595 -0.3605 C.ar 1 LGD -0.1777
19 C14 -1.2420 1.8345 -0.5470 C.ar 1 LGD -0.1148
20 N2 -0.8871 -0.9786 -0.2917 N.ar 1 LGD -0.5959
21 C15 -2.1251 -0.4555 -0.4726 C.ar 1 LGD 0.3789
22 C16 -2.3540 0.9535 -0.6104 C.ar 1 LGD -0.0827
23 C17 -3.6719 1.4446 -0.8091 C.ar 1 LGD -0.2818
24 C18 -4.7487 0.5349 -0.8655 C.ar 1 LGD 0.1824
25 C19 -4.5235 -0.8389 -0.7228 C.ar 1 LGD -0.1489
26 C20 -3.2254 -1.3259 -0.5313 C.ar 1 LGD -0.0710
27 C21 -3.9589 2.9390 -0.9632 C.3 1 LGD 0.1670
28 N3 -4.5396 3.4625 0.2902 N.4 1 LGD -0.6698
29 C22 -5.0099 4.8432 0.0670 C.3 1 LGD 0.0869
30 C23 -3.5476 3.4612 1.3847 C.3 1 LGD 0.0869
31 O5 -6.0270 0.9756 -1.0614 O.3 1 LGD -0.4697
32 H1 1.3559 -2.5530 0.0393 H 1 LGD 0.1805
33 H2 6.0860 -1.1128 -0.8581 H 1 LGD 0.0938
34 H3 6.2094 0.1676 0.3655 H 1 LGD 0.0938
35 H4 2.8314 -4.0715 1.7219 H 1 LGD 0.0443
36 H5 2.3946 -4.3831 0.0460 H 1 LGD 0.0443
37 H6 3.9523 -3.5818 -1.6326 H 1 LGD 0.4178
38 H7 4.5295 -5.8848 1.6218 H 1 LGD 0.0497
39 H8 3.0513 -6.4842 0.8780 H 1 LGD 0.0497
40 H9 4.3985 -5.9770 -0.1509 H 1 LGD 0.0497
41 H10 1.4760 2.5649 0.5970 H 1 LGD 0.0926
42 H11 1.6388 2.4505 -1.1994 H 1 LGD 0.0926
43 H12 -1.3309 2.9112 -0.6412 H 1 LGD 0.1330
44 H13 -5.3587 -1.5325 -0.7675 H 1 LGD 0.1812
45 H14 -3.0679 -2.3962 -0.4294 H 1 LGD 0.1815
46 H15 -3.0608 3.5053 -1.2083 H 1 LGD 0.1048
47 H16 -4.6747 3.0951 -1.7721 H 1 LGD 0.1048
48 H17 -5.7526 4.8534 -0.7330 H 1 LGD 0.1032
49 H18 -5.4616 5.2298 0.9824 H 1 LGD 0.1032
50 H19 -4.1670 5.4769 -0.2154 H 1 LGD 0.1032
51 H20 -2.6904 4.0762 1.1051 H 1 LGD 0.1032
52 H21 -4.0024 3.8641 2.2916 H 1 LGD 0.1032
53 H22 -3.2126 2.4396 1.5740 H 1 LGD 0.1032
54 H23 -6.0037 1.9214 -1.2830 H 1 LGD 0.4080
55 H24 -5.3233 2.8818 0.5590 H 1 LGD 0.4530
@BOND
1 2 14 2
2 14 15 1
3 15 16 1
4 16 18 1
5 14 17 1
6 1 3 1
7 1 4 2
8 2 5 1
9 3 6 1
10 17 18 ar
11 18 19 ar
12 19 22 ar
13 20 21 ar
14 17 20 ar
15 5 7 1
16 6 8 1
17 7 9 1
18 7 10 1
19 7 11 1
20 9 12 2
21 21 22 ar
22 22 23 ar
23 23 24 ar
24 24 25 ar
25 25 26 ar
26 21 26 ar
27 23 27 1
28 10 13 1
29 27 28 1
30 3 5 2
31 28 29 1
32 8 9 1
33 28 30 1
34 1 15 am
35 24 31 1
36 2 32 1
37 6 33 1
38 6 34 1
39 10 35 1
40 10 36 1
41 11 37 1
42 13 38 1
43 13 39 1
44 13 40 1
45 16 41 1
46 16 42 1
47 19 43 1
48 25 44 1
49 26 45 1
50 27 46 1
51 27 47 1
52 29 48 1
53 29 49 1
54 29 50 1
55 30 51 1
56 30 52 1
57 30 53 1
58 31 54 1
59 28 55 1