@COMMENT
LIGANDBOX_ID = D08680-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08680
NAME = Vinorelbine_(INN)_Navelbine_(TN)
MOLECULAR_FORMULA = C45H54N4O8
MOLECULAR_WEIGHT = 778.947
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 8
TPSA = 133.8700
HOMO = -12.9334
LUMO = -5.5015
mLOGPA = -4.613
mLOGS = -2.285
mLOGD = 2.347
@MOLECULE
D08680-01
113 121 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 25.1990 -27.3010 -0.7790 C.3 1 LGD 0.0383
2 C2 25.0450 -25.8550 -0.1990 C.ar 1 LGD 0.0067
3 C3 26.2340 -28.1760 0.0830 C.3 1 LGD -0.0406
4 C4 23.8480 -28.0770 -0.6890 C.2 1 LGD 0.6171
5 C5 25.9570 -24.7470 -0.2180 C.ar 1 LGD -0.2394
6 N1 23.8460 -25.4100 0.4060 N.ar 1 LGD -0.1442
7 C6 27.6030 -27.4900 0.1120 C.3 1 LGD -0.0858
8 O1 23.4370 -28.2660 0.6060 O.3 1 LGD -0.4561
9 O2 23.2280 -28.4940 -1.6560 O.2 1 LGD -0.4642
10 C7 25.2380 -23.6570 0.3990 C.ar 1 LGD -0.0839
11 C8 24.0010 -24.0940 0.7440 C.ar 1 LGD -0.0280
12 C9 27.7370 -26.3650 1.1480 C.3 1 LGD 0.1211
13 C10 22.2080 -28.9690 0.8590 C.3 1 LGD 0.1215
14 C11 25.6440 -22.3430 0.6710 C.ar 1 LGD -0.1219
15 C12 23.0570 -23.2780 1.3750 C.ar 1 LGD -0.1336
16 N2 28.3670 -25.2690 0.4110 N.4 1 LGD -0.6734
17 C13 24.7210 -21.4830 1.3030 C.ar 1 LGD -0.1135
18 C14 23.4310 -21.9480 1.6530 C.ar 1 LGD -0.0897
19 C15 29.7400 -25.7070 -0.0720 C.3 1 LGD 0.1371
20 C16 29.9800 -27.2620 -0.0750 C.2 1 LGD -0.1472
21 C17 28.9470 -28.1290 0.0400 C.2 1 LGD -0.1509
22 C18 31.4460 -27.6610 -0.2040 C.3 1 LGD -0.0455
23 C19 31.7150 -29.1820 -0.1350 C.3 1 LGD -0.0885
24 C20 27.4360 -24.7030 -0.6420 C.3 1 LGD 0.2259
25 C21 27.9190 -28.6400 -5.0550 C.3 1 LGD -0.0126
26 C22 28.0760 -30.1490 -4.7720 C.3 1 LGD 0.1527
27 C23 27.4910 -28.2980 -6.5300 C.3 1 LGD 0.1992
28 C24 29.2730 -28.0330 -4.5900 C.3 1 LGD -0.0892
29 C25 28.6010 -30.9990 -5.9930 C.3 1 LGD -0.0398
30 N3 28.9710 -30.2250 -3.6080 N.4 1 LGD -0.7285
31 C26 26.7340 -29.4960 -7.2260 C.3 1 LGD 0.0963
32 N4 26.5670 -27.1360 -6.3860 N.pl3 1 LGD -0.6698
33 C27 26.1560 -27.0570 -5.0690 C.ar 1 LGD 0.2053
34 C28 29.8410 -29.0340 -3.5520 C.3 1 LGD 0.1471
35 C29 27.6010 -30.8240 -7.2150 C.3 1 LGD 0.1995
36 C30 28.7460 -32.4180 -5.4500 C.2 1 LGD -0.0899
37 C31 30.0440 -30.5800 -6.4890 C.3 1 LGD -0.0753
38 C32 29.4960 -31.5500 -3.1970 C.3 1 LGD 0.1302
39 C33 26.4130 -29.1070 -8.6940 C.2 1 LGD 0.6142
40 O3 25.4880 -29.6930 -6.5390 O.3 1 LGD -0.5588
41 C34 26.8600 -25.9360 -7.1840 C.3 1 LGD 0.1966
42 O4 26.7930 -32.0060 -7.5080 O.3 1 LGD -0.4281
43 C35 29.1520 -32.6540 -4.1950 C.2 1 LGD -0.2202
44 C36 30.7150 -31.5740 -7.4760 C.3 1 LGD -0.0986
45 O5 27.5470 -28.7840 -9.3930 O.3 1 LGD -0.4629
46 O6 25.2890 -29.0740 -9.1700 O.2 1 LGD -0.4576
47 C37 27.4310 -28.3860 -10.7710 C.3 1 LGD 0.1256
48 C38 25.2000 -33.7720 -7.3470 C.3 1 LGD -0.1460
49 C39 25.9210 -32.6260 -6.6480 C.2 1 LGD 0.6599
50 O7 25.7450 -32.3400 -5.4760 O.2 1 LGD -0.5369
51 C40 26.8150 -27.9550 -4.2640 C.ar 1 LGD -0.2284
52 C41 26.5110 -28.0740 -2.9040 C.ar 1 LGD -0.0474
53 C42 25.1540 -26.2330 -4.5550 C.ar 1 LGD -0.2319
54 C43 25.5370 -27.2210 -2.3160 C.ar 1 LGD -0.1524
55 C44 24.8380 -26.3130 -3.1760 C.ar 1 LGD 0.2416
56 O8 23.8210 -25.5320 -2.6570 O.3 1 LGD -0.3465
57 C45 23.0800 -24.5610 -3.4150 C.3 1 LGD 0.1354
58 H1 25.8830 -28.2920 1.1160 H 1 LGD 0.0804
59 H2 26.3170 -29.1920 -0.3230 H 1 LGD 0.0804
60 H3 23.0180 -25.9700 0.5500 H 1 LGD 0.3342
61 H4 27.6200 -27.0950 -0.8970 H 1 LGD 0.0626
62 H5 26.7820 -26.0760 1.6010 H 1 LGD 0.1192
63 H6 28.3780 -26.6870 1.9800 H 1 LGD 0.1192
64 H7 22.0250 -29.0250 1.9400 H 1 LGD 0.0636
65 H8 21.3660 -28.4460 0.3880 H 1 LGD 0.0636
66 H9 22.2630 -29.9890 0.4590 H 1 LGD 0.0636
67 H10 26.6370 -21.9930 0.4050 H 1 LGD 0.1268
68 H11 22.0740 -23.6560 1.6430 H 1 LGD 0.1548
69 H12 25.0040 -20.4580 1.5260 H 1 LGD 0.1541
70 H13 22.7290 -21.2790 2.1420 H 1 LGD 0.1601
71 H14 29.9210 -25.3120 -1.0800 H 1 LGD 0.1033
72 H15 30.4930 -25.2490 0.5810 H 1 LGD 0.1033
73 H16 29.0260 -29.2140 0.0500 H 1 LGD 0.1576
74 H17 31.8450 -27.2730 -1.1500 H 1 LGD 0.0675
75 H18 32.0240 -27.1710 0.5910 H 1 LGD 0.0675
76 H19 31.3720 -29.5970 0.8220 H 1 LGD 0.0444
77 H20 31.2040 -29.7130 -0.9480 H 1 LGD 0.0444
78 H21 32.7890 -29.3840 -0.2250 H 1 LGD 0.0444
79 H22 27.5540 -25.2130 -1.6050 H 1 LGD 0.0967
80 H23 27.7180 -23.6610 -0.8310 H 1 LGD 0.0967
81 H24 27.0960 -30.5460 -4.4820 H 1 LGD 0.1542
82 H25 28.3770 -28.0200 -7.1160 H 1 LGD 0.0949
83 H26 29.9710 -27.9290 -5.4280 H 1 LGD 0.0835
84 H27 29.1470 -27.0360 -4.1470 H 1 LGD 0.0835
85 H28 30.8810 -29.2840 -3.7930 H 1 LGD 0.0947
86 H29 29.8070 -28.5960 -2.5490 H 1 LGD 0.0947
87 H30 28.2450 -30.7180 -8.0940 H 1 LGD 0.1135
88 H31 28.5430 -33.2420 -6.1310 H 1 LGD 0.1807
89 H32 30.0060 -29.5990 -6.9760 H 1 LGD 0.0397
90 H33 30.7280 -30.4800 -5.6410 H 1 LGD 0.0397
91 H34 30.5870 -31.5000 -3.0880 H 1 LGD 0.1003
92 H35 29.0830 -31.8110 -2.2150 H 1 LGD 0.1003
93 H36 25.1290 -28.8030 -6.3690 H 1 LGD 0.4409
94 H37 27.6560 -25.3490 -6.7080 H 1 LGD 0.0572
95 H38 27.1880 -26.2180 -8.1920 H 1 LGD 0.0572
96 H39 25.9610 -25.3130 -7.2770 H 1 LGD 0.0572
97 H40 29.2640 -33.6730 -3.8310 H 1 LGD 0.1840
98 H41 30.9440 -32.5280 -6.9850 H 1 LGD 0.0561
99 H42 30.0870 -31.7830 -8.3500 H 1 LGD 0.0561
100 H43 31.6630 -31.1580 -7.8410 H 1 LGD 0.0561
101 H44 26.8050 -27.4880 -10.8570 H 1 LGD 0.0604
102 H45 28.4230 -28.1610 -11.1810 H 1 LGD 0.0604
103 H46 26.9800 -29.1920 -11.3640 H 1 LGD 0.0604
104 H47 24.5100 -34.2710 -6.6550 H 1 LGD 0.0846
105 H48 24.6320 -33.3870 -8.2030 H 1 LGD 0.0846
106 H49 25.9300 -34.5040 -7.7140 H 1 LGD 0.0846
107 H50 27.0580 -28.8050 -2.3220 H 1 LGD 0.1057
108 H51 24.6290 -25.5590 -5.2230 H 1 LGD 0.1702
109 H52 23.7550 -23.7990 -3.8230 H 1 LGD 0.0587
110 H53 22.5410 -25.0480 -4.2370 H 1 LGD 0.0587
111 H54 22.3480 -24.0660 -2.7640 H 1 LGD 0.0587
112 H55 28.7149 -24.5956 1.0633 H 1 LGD 0.4411
113 H56 28.4663 -30.6065 -2.8336 H 1 LGD 0.4749
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 2
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 2
9 5 10 1
10 6 11 1
11 7 12 1
12 7 21 1
13 8 13 1
14 10 14 ar
15 11 15 ar
16 12 16 1
17 14 17 ar
18 15 18 ar
19 16 19 1
20 10 11 ar
21 19 20 1
22 17 18 ar
23 20 21 2
24 20 22 1
25 22 23 1
26 5 24 1
27 16 24 1
28 25 26 1
29 25 27 1
30 25 28 1
31 26 29 1
32 26 30 1
33 27 31 1
34 27 32 1
35 28 34 1
36 29 35 1
37 29 36 1
38 29 37 1
39 30 38 1
40 31 39 1
41 31 40 1
42 32 41 1
43 35 42 1
44 36 43 2
45 37 44 1
46 39 45 1
47 30 34 1
48 31 35 1
49 32 33 1
50 38 43 1
51 39 46 2
52 45 47 1
53 48 49 1
54 42 49 1
55 49 50 2
56 51 52 ar
57 33 53 ar
58 52 54 ar
59 53 55 ar
60 55 56 1
61 56 57 1
62 54 55 ar
63 25 51 1
64 33 51 ar
65 1 54 1
66 3 58 1
67 3 59 1
68 6 60 1
69 7 61 1
70 12 62 1
71 12 63 1
72 13 64 1
73 13 65 1
74 13 66 1
75 14 67 1
76 15 68 1
77 17 69 1
78 18 70 1
79 19 71 1
80 19 72 1
81 21 73 1
82 22 74 1
83 22 75 1
84 23 76 1
85 23 77 1
86 23 78 1
87 24 79 1
88 24 80 1
89 26 81 1
90 27 82 1
91 28 83 1
92 28 84 1
93 34 85 1
94 34 86 1
95 35 87 1
96 36 88 1
97 37 89 1
98 37 90 1
99 38 91 1
100 38 92 1
101 40 93 1
102 41 94 1
103 41 95 1
104 41 96 1
105 43 97 1
106 44 98 1
107 44 99 1
108 44 100 1
109 47 101 1
110 47 102 1
111 47 103 1
112 48 104 1
113 48 105 1
114 48 106 1
115 52 107 1
116 53 108 1
117 57 109 1
118 57 110 1
119 57 111 1
120 16 112 1
121 30 113 1