@COMMENT
LIGANDBOX_ID = D08680-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08680
NAME = Vinorelbine_(INN)_Navelbine_(TN)
MOLECULAR_FORMULA = C45H54N4O8
MOLECULAR_WEIGHT = 778.947
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 8
TPSA = 133.8700
HOMO = -12.9334
LUMO = -5.5015
mLOGPA = -4.613
mLOGS = -2.285
mLOGD = 2.347
@MOLECULE
D08680-03
113 121 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.1113 0.5126 2.5810 C.3 1 LGD 0.0371
2 C2 -2.2598 1.9550 3.1661 C.ar 1 LGD 0.0053
3 C3 -1.0678 -0.3560 3.4350 C.3 1 LGD -0.0443
4 C4 -3.4606 -0.2625 2.6799 C.2 1 LGD 0.6192
5 C5 -1.3370 3.0507 3.1509 C.ar 1 LGD -0.2461
6 N1 -3.4542 2.4126 3.7680 N.ar 1 LGD -0.1425
7 C6 0.2939 0.3421 3.4409 C.3 1 LGD -0.0880
8 O1 -3.8680 -0.4324 3.9775 O.3 1 LGD -0.4551
9 O2 -4.0851 -0.6804 1.7171 O.2 1 LGD -0.4672
10 C7 -2.0353 4.1439 3.7774 C.ar 1 LGD -0.0852
11 C8 -3.2783 3.7233 4.1199 C.ar 1 LGD -0.0284
12 C9 0.3921 1.4579 4.4892 C.3 1 LGD 0.1200
13 C10 -5.0957 -1.1334 4.2461 C.3 1 LGD 0.1214
14 C11 -1.6074 5.4490 4.0528 C.ar 1 LGD -0.1244
15 C12 -4.2097 4.5514 4.7551 C.ar 1 LGD -0.1323
16 N2 1.0465 2.5690 3.7759 N.4 1 LGD -0.6815
17 C13 -2.5156 6.3200 4.6915 C.ar 1 LGD -0.1112
18 C14 -3.8127 5.8737 5.0405 C.ar 1 LGD -0.0894
19 C15 2.4084 2.1238 3.2937 C.3 1 LGD 0.1564
20 C16 2.6603 0.5756 3.3314 C.2 1 LGD -0.1391
21 C17 1.6340 -0.2957 3.4304 C.2 1 LGD -0.1597
22 C18 4.1317 0.1915 3.2408 C.3 1 LGD -0.0468
23 C19 4.4077 -1.3293 3.2742 C.3 1 LGD -0.0890
24 C20 0.1284 3.0766 2.6980 C.3 1 LGD 0.2130
25 C21 0.6571 -0.7859 -1.6667 C.3 1 LGD -0.0211
26 C22 0.7862 -2.2929 -1.4018 C.3 1 LGD 0.1349
27 C23 0.2682 -0.4199 -3.1546 C.3 1 LGD 0.2071
28 C24 1.9877 -0.2170 -1.1366 C.3 1 LGD -0.0887
29 C25 1.3963 -3.1311 -2.5908 C.3 1 LGD -0.0284
30 N3 1.5377 -2.3906 -0.1218 N.4 1 LGD -0.6667
31 C26 -0.4613 -1.6330 -3.8667 C.3 1 LGD 0.0985
32 N4 -0.6793 0.7283 -3.0074 N.pl3 1 LGD -0.6611
33 C27 -1.1217 0.7811 -1.6985 C.ar 1 LGD 0.2036
34 C28 2.4601 -1.2248 -0.0572 C.3 1 LGD 0.1027
35 C29 0.4152 -2.9570 -3.8403 C.3 1 LGD 0.1989
36 C30 1.3424 -4.5468 -2.0412 C.2 1 LGD -0.1072
37 C31 2.9177 -2.8112 -2.8796 C.3 1 LGD -0.0733
38 C32 2.1974 -3.6982 0.1569 C.3 1 LGD 0.1604
39 C33 -0.9770 -1.2937 -5.2992 C.2 1 LGD 0.6212
40 O3 -1.6472 -1.9144 -3.0998 O.3 1 LGD -0.5866
41 C34 -0.3590 1.9657 -3.7388 C.3 1 LGD 0.1915
42 O4 1.0156 -3.2843 -5.1325 O.3 1 LGD -0.4355
43 C35 1.6915 -4.7960 -0.7735 C.2 1 LGD -0.2193
44 C36 3.7061 -3.9157 -3.6369 C.3 1 LGD -0.0965
45 O5 -0.1699 -0.4192 -5.9697 O.3 1 LGD -0.4425
46 O6 -2.0183 -1.7350 -5.7613 O.2 1 LGD -0.4616
47 C37 -0.4768 -0.0685 -7.3306 C.3 1 LGD 0.1265
48 C38 2.2098 -3.2364 -7.1962 C.3 1 LGD -0.1455
49 C39 1.8791 -2.5273 -5.8877 C.2 1 LGD 0.6503
50 O7 2.3323 -1.4372 -5.5899 O.2 1 LGD -0.5243
51 C40 -0.4686 -0.1178 -0.8923 C.ar 1 LGD -0.2396
52 C41 -0.7979 -0.2511 0.4599 C.ar 1 LGD -0.0582
53 C42 -2.1372 1.5950 -1.1912 C.ar 1 LGD -0.2290
54 C43 -1.7750 0.5969 1.0442 C.ar 1 LGD -0.1493
55 C44 -2.4699 1.5056 0.1838 C.ar 1 LGD 0.2408
56 O8 -3.4937 2.2781 0.7025 O.3 1 LGD -0.3447
57 C45 -4.2155 3.2668 -0.0506 C.3 1 LGD 0.1343
58 H1 -1.4075 -0.4654 4.4730 H 1 LGD 0.0796
59 H2 -0.9862 -1.3746 3.0369 H 1 LGD 0.0796
60 H3 -4.2916 1.8662 3.9107 H 1 LGD 0.3348
61 H4 0.3276 0.7288 2.4286 H 1 LGD 0.0645
62 H5 -0.5864 1.7551 4.8674 H 1 LGD 0.1204
63 H6 1.0084 1.1368 5.3312 H 1 LGD 0.1204
64 H7 -5.2703 -1.1794 5.3281 H 1 LGD 0.0642
65 H8 -5.9412 -0.6151 3.7760 H 1 LGD 0.0642
66 H9 -5.0430 -2.1576 3.8555 H 1 LGD 0.0642
67 H10 -0.6099 5.7828 3.7827 H 1 LGD 0.1264
68 H11 -5.1997 4.1911 5.0205 H 1 LGD 0.1555
69 H12 -2.2171 7.3398 4.9174 H 1 LGD 0.1549
70 H13 -4.5043 6.5519 5.5326 H 1 LGD 0.1610
71 H14 2.5523 2.4976 2.2785 H 1 LGD 0.1026
72 H15 3.1530 2.6110 3.9258 H 1 LGD 0.1026
73 H16 1.7172 -1.3801 3.4625 H 1 LGD 0.1599
74 H17 4.5552 0.6049 2.3165 H 1 LGD 0.0696
75 H18 4.6810 0.6669 4.0636 H 1 LGD 0.0696
76 H19 4.0508 -1.7712 4.2131 H 1 LGD 0.0451
77 H20 3.9142 -1.8393 2.4376 H 1 LGD 0.0451
78 H21 5.4851 -1.5226 3.1984 H 1 LGD 0.0451
79 H22 0.2455 2.4820 1.7916 H 1 LGD 0.0956
80 H23 0.4210 4.0987 2.4525 H 1 LGD 0.0956
81 H24 -0.2154 -2.6910 -1.2268 H 1 LGD 0.1329
82 H25 1.1645 -0.1265 -3.7148 H 1 LGD 0.1199
83 H26 2.7351 -0.1414 -1.9342 H 1 LGD 0.0879
84 H27 1.8653 0.7866 -0.7088 H 1 LGD 0.0879
85 H28 3.4838 -1.5405 -0.2635 H 1 LGD 0.0969
86 H29 2.4138 -0.7787 0.9375 H 1 LGD 0.0969
87 H30 -0.3340 -3.7457 -3.6919 H 1 LGD 0.1171
88 H31 1.0064 -5.3396 -2.7080 H 1 LGD 0.1838
89 H32 3.0233 -1.8498 -3.3820 H 1 LGD 0.0445
90 H33 3.4675 -2.6771 -1.9463 H 1 LGD 0.0445
91 H34 3.2730 -3.5798 0.0153 H 1 LGD 0.0997
92 H35 2.0235 -3.9661 1.2006 H 1 LGD 0.0997
93 H36 -2.0654 -1.0533 -2.9140 H 1 LGD 0.4431
94 H37 0.3712 2.5595 -3.1749 H 1 LGD 0.0594
95 H38 0.0682 1.7383 -4.7221 H 1 LGD 0.0594
96 H39 -1.2674 2.5624 -3.8880 H 1 LGD 0.0594
97 H40 1.6543 -5.8034 -0.3634 H 1 LGD 0.1841
98 H41 4.0401 -4.6929 -2.9379 H 1 LGD 0.0547
99 H42 3.1138 -4.4111 -4.4122 H 1 LGD 0.0547
100 H43 4.5995 -3.4890 -4.1096 H 1 LGD 0.0547
101 H44 -1.4379 0.4577 -7.3829 H 1 LGD 0.0594
102 H45 0.3071 0.5858 -7.7318 H 1 LGD 0.0594
103 H46 -0.5277 -0.9714 -7.9528 H 1 LGD 0.0594
104 H47 2.9149 -2.6390 -7.7875 H 1 LGD 0.0847
105 H48 2.6571 -4.2165 -6.9897 H 1 LGD 0.0847
106 H49 1.2927 -3.3870 -7.7791 H 1 LGD 0.0847
107 H50 -0.2623 -0.9799 1.0499 H 1 LGD 0.0963
108 H51 -2.6554 2.2728 -1.8612 H 1 LGD 0.1718
109 H52 -3.5273 4.0302 -0.4349 H 1 LGD 0.0593
110 H53 -4.7429 2.7976 -0.8904 H 1 LGD 0.0593
111 H54 -4.9544 3.7572 0.5952 H 1 LGD 0.0593
112 H55 1.1736 3.3224 4.4378 H 1 LGD 0.4507
113 H56 0.8480 -2.2533 0.6021 H 1 LGD 0.4355
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 2
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 2
9 5 10 1
10 6 11 1
11 7 12 1
12 7 21 1
13 8 13 1
14 10 14 ar
15 11 15 ar
16 12 16 1
17 14 17 ar
18 15 18 ar
19 16 19 1
20 10 11 ar
21 19 20 1
22 17 18 ar
23 20 21 2
24 20 22 1
25 22 23 1
26 5 24 1
27 16 24 1
28 25 26 1
29 25 27 1
30 25 28 1
31 26 29 1
32 26 30 1
33 27 31 1
34 27 32 1
35 28 34 1
36 29 35 1
37 29 36 1
38 29 37 1
39 30 38 1
40 31 39 1
41 31 40 1
42 32 41 1
43 35 42 1
44 36 43 2
45 37 44 1
46 39 45 1
47 30 34 1
48 31 35 1
49 32 33 1
50 38 43 1
51 39 46 2
52 45 47 1
53 48 49 1
54 42 49 1
55 49 50 2
56 51 52 ar
57 33 53 ar
58 52 54 ar
59 53 55 ar
60 55 56 1
61 56 57 1
62 54 55 ar
63 25 51 1
64 33 51 ar
65 1 54 1
66 3 58 1
67 3 59 1
68 6 60 1
69 7 61 1
70 12 62 1
71 12 63 1
72 13 64 1
73 13 65 1
74 13 66 1
75 14 67 1
76 15 68 1
77 17 69 1
78 18 70 1
79 19 71 1
80 19 72 1
81 21 73 1
82 22 74 1
83 22 75 1
84 23 76 1
85 23 77 1
86 23 78 1
87 24 79 1
88 24 80 1
89 26 81 1
90 27 82 1
91 28 83 1
92 28 84 1
93 34 85 1
94 34 86 1
95 35 87 1
96 36 88 1
97 37 89 1
98 37 90 1
99 38 91 1
100 38 92 1
101 40 93 1
102 41 94 1
103 41 95 1
104 41 96 1
105 43 97 1
106 44 98 1
107 44 99 1
108 44 100 1
109 47 101 1
110 47 102 1
111 47 103 1
112 48 104 1
113 48 105 1
114 48 106 1
115 52 107 1
116 53 108 1
117 57 109 1
118 57 110 1
119 57 111 1
120 16 112 1
121 30 113 1