@COMMENT
LIGANDBOX_ID = D08680-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08680
NAME = Vinorelbine_(INN)_Navelbine_(TN)
MOLECULAR_FORMULA = C45H54N4O8
MOLECULAR_WEIGHT = 778.947
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 8
TPSA = 133.8700
HOMO = -12.9334
LUMO = -5.5015
mLOGPA = -4.613
mLOGS = -2.285
mLOGD = 2.347
@MOLECULE
D08680-04
113 121 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.7435 0.7633 2.2173 C.3 1 LGD 0.0379
2 C2 -1.8948 2.2070 2.7971 C.ar 1 LGD 0.0065
3 C3 -0.6989 -0.0994 3.0731 C.3 1 LGD -0.0437
4 C4 -3.0921 -0.0144 2.3097 C.2 1 LGD 0.6242
5 C5 -0.9760 3.3055 2.7691 C.ar 1 LGD -0.2455
6 N1 -3.0905 2.6663 3.3949 N.ar 1 LGD -0.1436
7 C6 0.6620 0.6015 3.0728 C.3 1 LGD -0.0884
8 O1 -3.5090 -0.1816 3.6042 O.3 1 LGD -0.4527
9 O2 -3.7099 -0.4356 1.3438 O.2 1 LGD -0.4793
10 C7 -1.6792 4.4043 3.3800 C.ar 1 LGD -0.0847
11 C8 -2.9207 3.9830 3.7277 C.ar 1 LGD -0.0284
12 C9 0.7673 1.7260 4.1103 C.3 1 LGD 0.1208
13 C10 -4.7408 -0.8806 3.8604 C.3 1 LGD 0.1208
14 C11 -1.2585 5.7162 3.6330 C.ar 1 LGD -0.1238
15 C12 -3.8579 4.8178 4.3455 C.ar 1 LGD -0.1328
16 N2 1.4138 2.8325 3.3815 N.4 1 LGD -0.6816
17 C13 -2.1724 6.5936 4.2547 C.ar 1 LGD -0.1118
18 C14 -3.4681 6.1469 4.6085 C.ar 1 LGD -0.0897
19 C15 2.7719 2.3863 2.8890 C.3 1 LGD 0.1573
20 C16 3.0254 0.8381 2.9263 C.2 1 LGD -0.1431
21 C17 2.0022 -0.0341 3.0452 C.2 1 LGD -0.1550
22 C18 4.4946 0.4539 2.8081 C.3 1 LGD -0.0461
23 C19 4.7693 -1.0674 2.8297 C.3 1 LGD -0.0887
24 C20 0.4867 3.3321 2.3076 C.3 1 LGD 0.2128
25 C21 0.9757 -0.5765 -2.0523 C.3 1 LGD -0.0197
26 C22 1.1552 -2.0794 -1.7552 C.3 1 LGD 0.1384
27 C23 0.5163 -0.2601 -3.5244 C.3 1 LGD 0.2457
28 C24 2.3223 0.0470 -1.6244 C.3 1 LGD -0.0930
29 C25 1.6941 -2.9264 -2.9721 C.3 1 LGD -0.0319
30 N3 2.0206 -2.1117 -0.5450 N.4 1 LGD -0.6642
31 C26 -0.2141 -1.4701 -4.2345 C.3 1 LGD 0.1035
32 N4 -0.4087 0.8967 -3.3868 N.pl3 1 LGD -0.6518
33 C27 -0.7895 1.0055 -2.0648 C.ar 1 LGD 0.2202
34 C28 2.9289 -0.9382 -0.6017 C.3 1 LGD 0.1010
35 C29 0.6654 -2.7869 -4.1788 C.3 1 LGD 0.1651
36 C30 1.8737 -4.3292 -2.4160 C.2 1 LGD -0.0941
37 C31 3.1189 -2.4796 -3.4893 C.3 1 LGD -0.0757
38 C32 2.7517 -3.3788 -0.2642 C.3 1 LGD 0.1619
39 C33 -1.6797 -1.6776 -3.7204 C.2 1 LGD 0.6170
40 O3 -0.3412 -1.1237 -5.6221 O.3 1 LGD -0.5817
41 C34 -0.1320 2.0797 -4.2153 C.3 1 LGD 0.1969
42 O4 -0.1278 -3.9759 -4.4760 O.3 1 LGD -0.4346
43 C35 2.3300 -4.5221 -1.1757 C.2 1 LGD -0.2117
44 C36 3.7990 -3.4704 -4.4744 C.3 1 LGD -0.0991
45 O5 -1.7638 -1.8604 -2.3702 O.3 1 LGD -0.4428
46 O6 -2.6541 -1.6666 -4.4574 O.2 1 LGD -0.4897
47 C37 -3.0436 -2.0241 -1.7362 C.3 1 LGD 0.1347
48 C38 -1.7149 -5.7485 -4.3539 C.3 1 LGD -0.1476
49 C39 -0.9319 -4.6726 -3.6100 C.2 1 LGD 0.6442
50 O7 -1.0081 -4.4981 -2.4069 O.2 1 LGD -0.5391
51 C40 -0.1102 0.1265 -1.2547 C.ar 1 LGD -0.2212
52 C41 -0.4219 0.0007 0.0999 C.ar 1 LGD -0.0540
53 C42 -1.8017 1.8187 -1.5565 C.ar 1 LGD -0.2325
54 C43 -1.4046 0.8456 0.6831 C.ar 1 LGD -0.1617
55 C44 -2.1138 1.7441 -0.1777 C.ar 1 LGD 0.2375
56 O8 -3.1402 2.5131 0.3411 O.3 1 LGD -0.3481
57 C45 -3.8686 3.4950 -0.4151 C.3 1 LGD 0.1350
58 H1 -1.0383 -0.2051 4.1116 H 1 LGD 0.0800
59 H2 -0.6160 -1.1188 2.6770 H 1 LGD 0.0800
60 H3 -3.9270 2.1195 3.5410 H 1 LGD 0.3340
61 H4 0.6884 0.9850 2.0599 H 1 LGD 0.0656
62 H5 -0.2088 2.0251 4.4933 H 1 LGD 0.1201
63 H6 1.3912 1.4132 4.9498 H 1 LGD 0.1201
64 H7 -4.9270 -0.9267 4.9404 H 1 LGD 0.0638
65 H8 -5.5805 -0.3609 3.3814 H 1 LGD 0.0638
66 H9 -4.6861 -1.9047 3.4697 H 1 LGD 0.0638
67 H10 -0.2627 6.0507 3.3578 H 1 LGD 0.1264
68 H11 -4.8472 4.4578 4.6136 H 1 LGD 0.1550
69 H12 -1.8797 7.6188 4.4629 H 1 LGD 0.1546
70 H13 -4.1644 6.8303 5.0864 H 1 LGD 0.1605
71 H14 2.9073 2.7587 1.8720 H 1 LGD 0.1019
72 H15 3.5217 2.8746 3.5140 H 1 LGD 0.1019
73 H16 2.0869 -1.1183 3.0775 H 1 LGD 0.1602
74 H17 4.9016 0.8704 1.8777 H 1 LGD 0.0687
75 H18 5.0590 0.9257 3.6226 H 1 LGD 0.0687
76 H19 4.4306 -1.5127 3.7737 H 1 LGD 0.0445
77 H20 4.2581 -1.5733 2.0012 H 1 LGD 0.0445
78 H21 5.8446 -1.2620 2.7316 H 1 LGD 0.0445
79 H22 0.5991 2.7324 1.4039 H 1 LGD 0.0959
80 H23 0.7752 4.3534 2.0537 H 1 LGD 0.0959
81 H24 0.1901 -2.5058 -1.4787 H 1 LGD 0.1570
82 H25 1.3929 0.0229 -4.1208 H 1 LGD 0.0910
83 H26 3.0023 0.1670 -2.4751 H 1 LGD 0.0842
84 H27 2.1920 1.0400 -1.1745 H 1 LGD 0.0842
85 H28 3.9214 -1.2491 -0.9315 H 1 LGD 0.0965
86 H29 3.0026 -0.4815 0.3868 H 1 LGD 0.0965
87 H30 1.3037 -2.6784 -5.0624 H 1 LGD 0.1189
88 H31 1.6422 -5.1723 -3.0637 H 1 LGD 0.1782
89 H32 3.0520 -1.5077 -3.9901 H 1 LGD 0.0395
90 H33 3.8103 -2.3516 -2.6511 H 1 LGD 0.0395
91 H34 3.8196 -3.1963 -0.3975 H 1 LGD 0.0968
92 H35 2.5891 -3.6490 0.7807 H 1 LGD 0.0968
93 H36 -1.2298 -1.4091 -5.9046 H 1 LGD 0.4591
94 H37 0.6849 2.6664 -3.7765 H 1 LGD 0.0579
95 H38 0.1606 1.7746 -5.2280 H 1 LGD 0.0579
96 H39 -1.0272 2.7092 -4.2905 H 1 LGD 0.0579
97 H40 2.4653 -5.5265 -0.7791 H 1 LGD 0.1833
98 H41 4.0402 -4.4204 -3.9817 H 1 LGD 0.0570
99 H42 3.1707 -3.6874 -5.3460 H 1 LGD 0.0570
100 H43 4.7405 -3.0447 -4.8435 H 1 LGD 0.0570
101 H44 -3.5722 -2.8872 -2.1600 H 1 LGD 0.0600
102 H45 -2.9035 -2.1940 -0.6615 H 1 LGD 0.0600
103 H46 -3.6542 -1.1227 -1.8717 H 1 LGD 0.0600
104 H47 -2.3927 -6.2728 -3.6689 H 1 LGD 0.0871
105 H48 -2.3051 -5.2901 -5.1574 H 1 LGD 0.0871
106 H49 -1.0231 -6.4734 -4.8004 H 1 LGD 0.0871
107 H50 0.1220 -0.7292 0.6835 H 1 LGD 0.0982
108 H51 -2.3420 2.4732 -2.2318 H 1 LGD 0.1709
109 H52 -3.1843 4.2570 -0.8087 H 1 LGD 0.0583
110 H53 -4.3992 3.0187 -1.2490 H 1 LGD 0.0583
111 H54 -4.6054 3.9883 0.2307 H 1 LGD 0.0583
112 H55 1.5463 3.5914 4.0361 H 1 LGD 0.4502
113 H56 1.3964 -1.9539 0.2326 H 1 LGD 0.4356
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 2
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 2
9 5 10 1
10 6 11 1
11 7 12 1
12 7 21 1
13 8 13 1
14 10 14 ar
15 11 15 ar
16 12 16 1
17 14 17 ar
18 15 18 ar
19 16 19 1
20 10 11 ar
21 19 20 1
22 17 18 ar
23 20 21 2
24 20 22 1
25 22 23 1
26 5 24 1
27 16 24 1
28 25 26 1
29 25 27 1
30 25 28 1
31 26 29 1
32 26 30 1
33 27 31 1
34 27 32 1
35 28 34 1
36 29 35 1
37 29 36 1
38 29 37 1
39 30 38 1
40 31 39 1
41 31 40 1
42 32 41 1
43 35 42 1
44 36 43 2
45 37 44 1
46 39 45 1
47 30 34 1
48 31 35 1
49 32 33 1
50 38 43 1
51 39 46 2
52 45 47 1
53 48 49 1
54 42 49 1
55 49 50 2
56 51 52 ar
57 33 53 ar
58 52 54 ar
59 53 55 ar
60 55 56 1
61 56 57 1
62 54 55 ar
63 25 51 1
64 33 51 ar
65 1 54 1
66 3 58 1
67 3 59 1
68 6 60 1
69 7 61 1
70 12 62 1
71 12 63 1
72 13 64 1
73 13 65 1
74 13 66 1
75 14 67 1
76 15 68 1
77 17 69 1
78 18 70 1
79 19 71 1
80 19 72 1
81 21 73 1
82 22 74 1
83 22 75 1
84 23 76 1
85 23 77 1
86 23 78 1
87 24 79 1
88 24 80 1
89 26 81 1
90 27 82 1
91 28 83 1
92 28 84 1
93 34 85 1
94 34 86 1
95 35 87 1
96 36 88 1
97 37 89 1
98 37 90 1
99 38 91 1
100 38 92 1
101 40 93 1
102 41 94 1
103 41 95 1
104 41 96 1
105 43 97 1
106 44 98 1
107 44 99 1
108 44 100 1
109 47 101 1
110 47 102 1
111 47 103 1
112 48 104 1
113 48 105 1
114 48 106 1
115 52 107 1
116 53 108 1
117 57 109 1
118 57 110 1
119 57 111 1
120 16 112 1
121 30 113 1