@COMMENT
LIGANDBOX_ID = D08854-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08854
NAME = Amrubicin_(USAN/INN)
MOLECULAR_FORMULA = C25H25NO9
MOLECULAR_WEIGHT = 483.473
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 6
NUM_OF_ACCEPTOR = 9
NUM_OF_CHIRAL_ATOMS = 5
TPSA = 176.6100
HOMO = -11.8500
LUMO = -4.2008
mLOGPA = -5.964
mLOGD = 0.505
mLOGS = 0.301
@MOLECULE
D08854-02
61 65 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -7.7443 0.5864 0.7862 C.ar 1 LGD -0.1034
2 C2 -7.5433 -0.7918 0.9338 C.ar 1 LGD -0.1021
3 C3 -6.2478 -1.3226 0.8478 C.ar 1 LGD -0.0747
4 C4 -5.1393 -0.4787 0.6195 C.ar 1 LGD -0.1325
5 C5 -5.3414 0.9059 0.4748 C.ar 1 LGD -0.1351
6 C6 -6.6491 1.4313 0.5554 C.ar 1 LGD -0.0751
7 C7 -3.7596 -1.0621 0.5153 C.2 1 LGD 0.6038
8 C8 -2.5723 -0.1149 0.5705 C.ar 1 LGD -0.1688
9 C9 -2.7784 1.2803 0.4401 C.ar 1 LGD -0.1671
10 C10 -4.1805 1.8213 0.2210 C.2 1 LGD 0.6055
11 C11 -1.2545 -0.6062 0.7692 C.ar 1 LGD 0.1817
12 C12 -0.1476 0.2701 0.8389 C.ar 1 LGD -0.0781
13 C13 -0.3612 1.6637 0.7425 C.ar 1 LGD -0.0844
14 C14 -1.6685 2.1587 0.5414 C.ar 1 LGD 0.1603
15 C15 1.2635 -0.3181 1.0497 C.3 1 LGD 0.2281
16 C16 2.3882 0.7291 1.2810 C.3 1 LGD -0.1048
17 C17 2.1758 2.0690 0.5198 C.3 1 LGD 0.0245
18 C18 0.8023 2.6456 0.9412 C.3 1 LGD -0.0263
19 O1 -3.6191 -2.2672 0.3811 O.2 1 LGD -0.5202
20 O2 -4.3788 2.9623 -0.1651 O.2 1 LGD -0.5270
21 O3 -1.8563 3.5129 0.4763 O.3 1 LGD -0.5233
22 O4 -1.0396 -1.9482 0.9323 O.3 1 LGD -0.5085
23 O5 1.6073 -1.1269 -0.0976 O.3 1 LGD -0.4253
24 C19 2.1598 -2.4337 0.1805 C.3 1 LGD 0.3340
25 C20 2.3146 1.9612 -1.0321 C.2 1 LGD 0.5419
26 C21 1.9713 3.2126 -1.8498 C.3 1 LGD -0.1928
27 O6 2.7176 0.9613 -1.5961 O.2 1 LGD -0.4106
28 N1 3.2243 2.9927 1.0001 N.4 1 LGD -0.8188
29 C22 2.0230 -3.3140 -1.0878 C.3 1 LGD -0.1244
30 C23 2.9773 -2.8454 -2.2135 C.3 1 LGD 0.1248
31 C24 4.4339 -2.7298 -1.6970 C.3 1 LGD 0.0768
32 C25 4.4666 -1.8137 -0.4527 C.3 1 LGD 0.0976
33 O7 3.5604 -2.3380 0.5488 O.3 1 LGD -0.4600
34 O8 4.9496 -4.0170 -1.3515 O.3 1 LGD -0.5940
35 O9 2.9149 -3.7314 -3.3279 O.3 1 LGD -0.5835
36 H1 -8.7468 1.0002 0.8498 H 1 LGD 0.1550
37 H2 -8.3899 -1.4488 1.1127 H 1 LGD 0.1554
38 H3 -6.1095 -2.3943 0.9629 H 1 LGD 0.1624
39 H4 -6.8217 2.4983 0.4429 H 1 LGD 0.1610
40 H5 1.2238 -0.9564 1.9425 H 1 LGD 0.0846
41 H6 2.4150 0.9432 2.3576 H 1 LGD 0.0713
42 H7 3.3698 0.3052 1.0445 H 1 LGD 0.0713
43 H8 0.8389 2.9099 2.0061 H 1 LGD 0.0745
44 H9 0.6281 3.5923 0.4173 H 1 LGD 0.0745
45 H10 -2.7957 3.6737 0.2625 H 1 LGD 0.4781
46 H11 -1.8926 -2.4047 0.7986 H 1 LGD 0.4757
47 H12 1.5970 -2.8996 0.9982 H 1 LGD 0.0971
48 H13 0.8846 3.2956 -1.9742 H 1 LGD 0.0797
49 H14 2.3400 4.1169 -1.3510 H 1 LGD 0.0797
50 H15 2.4355 3.1533 -2.8426 H 1 LGD 0.0797
51 H16 3.1076 3.9012 0.5741 H 1 LGD 0.4567
52 H17 3.1612 3.0866 2.0040 H 1 LGD 0.4567
53 H18 2.2382 -4.3570 -0.8225 H 1 LGD 0.0786
54 H19 0.9851 -3.2833 -1.4431 H 1 LGD 0.0786
55 H20 2.6520 -1.8474 -2.5351 H 1 LGD 0.0826
56 H21 5.0541 -2.2810 -2.4835 H 1 LGD 0.0906
57 H22 5.4859 -1.7778 -0.0484 H 1 LGD 0.0584
58 H23 4.1842 -0.7959 -0.7357 H 1 LGD 0.0584
59 H24 4.7458 -4.1569 -0.4094 H 1 LGD 0.4207
60 H25 3.6070 -4.4019 -3.1859 H 1 LGD 0.4238
61 H26 4.1350 2.6257 0.7599 H 1 LGD 0.4567
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 4 7 1
8 7 8 1
9 8 9 ar
10 9 10 1
11 5 10 1
12 8 11 ar
13 11 12 ar
14 12 13 ar
15 13 14 ar
16 9 14 ar
17 12 15 1
18 15 16 1
19 16 17 1
20 17 18 1
21 13 18 1
22 7 19 2
23 10 20 2
24 14 21 1
25 11 22 1
26 23 24 1
27 15 23 1
28 17 25 1
29 25 26 1
30 25 27 2
31 17 28 1
32 24 29 1
33 29 30 1
34 30 31 1
35 31 32 1
36 32 33 1
37 24 33 1
38 31 34 1
39 30 35 1
40 1 36 1
41 2 37 1
42 3 38 1
43 6 39 1
44 15 40 1
45 16 41 1
46 16 42 1
47 18 43 1
48 18 44 1
49 21 45 1
50 22 46 1
51 24 47 1
52 26 48 1
53 26 49 1
54 26 50 1
55 28 51 1
56 28 52 1
57 29 53 1
58 29 54 1
59 30 55 1
60 31 56 1
61 32 57 1
62 32 58 1
63 34 59 1
64 35 60 1
65 28 61 1