@COMMENT
LIGANDBOX_ID = D08854-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08854
NAME = Amrubicin_(USAN/INN)
MOLECULAR_FORMULA = C25H25NO9
MOLECULAR_WEIGHT = 483.473
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 6
NUM_OF_ACCEPTOR = 9
NUM_OF_CHIRAL_ATOMS = 5
TPSA = 176.6100
HOMO = -11.8500
LUMO = -4.2008
mLOGPA = -5.964
mLOGD = 0.505
mLOGS = 0.301
@MOLECULE
D08854-04
61 65 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -7.9139 0.6408 0.7040 C.ar 1 LGD -0.1016
2 C2 -7.7296 -0.7381 0.8668 C.ar 1 LGD -0.1017
3 C3 -6.4398 -1.2839 0.7960 C.ar 1 LGD -0.0739
4 C4 -5.3210 -0.4544 0.5672 C.ar 1 LGD -0.1350
5 C5 -5.5058 0.9306 0.4033 C.ar 1 LGD -0.1344
6 C6 -6.8080 1.4711 0.4704 C.ar 1 LGD -0.0735
7 C7 -3.9482 -1.0539 0.4848 C.2 1 LGD 0.6049
8 C8 -2.7529 -0.1194 0.5437 C.ar 1 LGD -0.1720
9 C9 -2.9377 1.2750 0.3739 C.ar 1 LGD -0.1618
10 C10 -4.3327 1.8298 0.1428 C.2 1 LGD 0.6036
11 C11 -1.4473 -0.6227 0.7807 C.ar 1 LGD 0.1800
12 C12 -0.3322 0.2403 0.8430 C.ar 1 LGD -0.1112
13 C13 -0.5133 1.6285 0.6587 C.ar 1 LGD -0.1020
14 C14 -1.8112 2.1371 0.4365 C.ar 1 LGD 0.1615
15 C15 1.0578 -0.3604 1.1012 C.3 1 LGD 0.1996
16 C16 2.1458 0.6864 1.4578 C.3 1 LGD -0.1165
17 C17 2.0678 1.9545 0.5660 C.3 1 LGD 0.0297
18 C18 0.6709 2.6054 0.7566 C.3 1 LGD -0.0394
19 O1 -3.8183 -2.2614 0.3608 O.2 1 LGD -0.5242
20 O2 -4.5167 2.9691 -0.2550 O.2 1 LGD -0.5210
21 O3 -1.9689 3.4903 0.3052 O.3 1 LGD -0.5087
22 O4 -1.2483 -1.9636 0.9733 O.3 1 LGD -0.5124
23 O5 1.4539 -1.0770 -0.0915 O.3 1 LGD -0.4921
24 C19 2.1347 -2.3342 0.1156 C.3 1 LGD 0.3403
25 C20 3.2071 2.9617 0.8979 C.2 1 LGD 0.5323
26 C21 4.6433 2.4245 0.8651 C.3 1 LGD -0.1941
27 O6 2.9885 4.1324 1.1589 O.2 1 LGD -0.4262
28 N1 2.1822 1.5647 -0.8553 N.4 1 LGD -0.8162
29 C22 2.0070 -3.1900 -1.1679 C.3 1 LGD -0.1328
30 C23 2.7992 -2.5800 -2.3490 C.3 1 LGD 0.1072
31 C24 4.2594 -2.2752 -1.9320 C.3 1 LGD 0.0733
32 C25 4.2923 -1.4329 -0.6365 C.3 1 LGD 0.1545
33 O7 3.5380 -2.1142 0.3909 O.3 1 LGD -0.4326
34 O8 4.9226 -1.5656 -2.9760 O.3 1 LGD -0.6032
35 O9 2.7800 -3.4735 -3.4610 O.3 1 LGD -0.5821
36 H1 -8.9121 1.0663 0.7573 H 1 LGD 0.1564
37 H2 -8.5845 -1.3839 1.0467 H 1 LGD 0.1562
38 H3 -6.3137 -2.3556 0.9237 H 1 LGD 0.1621
39 H4 -6.9681 2.5386 0.3452 H 1 LGD 0.1628
40 H5 0.9779 -1.0597 1.9441 H 1 LGD 0.1006
41 H6 2.0124 0.9844 2.5060 H 1 LGD 0.0971
42 H7 3.1363 0.2235 1.4019 H 1 LGD 0.0971
43 H8 0.6312 3.0857 1.7433 H 1 LGD 0.1041
44 H9 0.5640 3.4139 0.0215 H 1 LGD 0.1041
45 H10 -2.9089 3.6640 0.1047 H 1 LGD 0.4777
46 H11 -2.1026 -2.4149 0.8308 H 1 LGD 0.4767
47 H12 1.6719 -2.8714 0.9523 H 1 LGD 0.1122
48 H13 4.8606 1.8738 1.7886 H 1 LGD 0.0805
49 H14 4.7880 1.7508 0.0123 H 1 LGD 0.0805
50 H15 5.3554 3.2547 0.7762 H 1 LGD 0.0805
51 H16 3.0943 1.1710 -1.0343 H 1 LGD 0.4630
52 H17 1.4826 0.8612 -1.0566 H 1 LGD 0.4630
53 H18 2.3766 -4.2012 -0.9542 H 1 LGD 0.0846
54 H19 0.9477 -3.2861 -1.4393 H 1 LGD 0.0846
55 H20 2.3156 -1.6361 -2.6327 H 1 LGD 0.0718
56 H21 4.7792 -3.2232 -1.7407 H 1 LGD 0.0717
57 H22 5.3312 -1.3079 -0.3070 H 1 LGD 0.0388
58 H23 3.8711 -0.4399 -0.8261 H 1 LGD 0.0388
59 H24 4.5040 -1.8367 -3.8128 H 1 LGD 0.4338
60 H25 3.2534 -4.2820 -3.1968 H 1 LGD 0.4200
61 H26 2.0348 2.3684 -1.4494 H 1 LGD 0.4630
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 4 7 1
8 7 8 1
9 8 9 ar
10 9 10 1
11 5 10 1
12 8 11 ar
13 11 12 ar
14 12 13 ar
15 13 14 ar
16 9 14 ar
17 12 15 1
18 15 16 1
19 16 17 1
20 17 18 1
21 13 18 1
22 7 19 2
23 10 20 2
24 14 21 1
25 11 22 1
26 23 24 1
27 15 23 1
28 17 25 1
29 25 26 1
30 25 27 2
31 17 28 1
32 24 29 1
33 29 30 1
34 30 31 1
35 31 32 1
36 32 33 1
37 24 33 1
38 31 34 1
39 30 35 1
40 1 36 1
41 2 37 1
42 3 38 1
43 6 39 1
44 15 40 1
45 16 41 1
46 16 42 1
47 18 43 1
48 18 44 1
49 21 45 1
50 22 46 1
51 24 47 1
52 26 48 1
53 26 49 1
54 26 50 1
55 28 51 1
56 28 52 1
57 29 53 1
58 29 54 1
59 30 55 1
60 31 56 1
61 32 57 1
62 32 58 1
63 34 59 1
64 35 60 1
65 28 61 1