@COMMENT
LIGANDBOX_ID = D08901-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08901
NAME = Degarelix_(INN/USAN)
MOLECULAR_FORMULA = C82H103N18O16Cl
MOLECULAR_WEIGHT = 1632.289
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 19
NUM_OF_ACCEPTOR = 17
NUM_OF_CHIRAL_ATOMS = 11
TPSA = 512.8700
HOMO = -10.4058
LUMO = -3.4073
mLOGD = 1.821
mLOGPA = -8.411
mLOGS = -5.295
@MOLECULE
D08901-02
221 228 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.1760 -0.6010 -5.0710 C.3 1 LGD 0.0780
2 C2 -2.0586 -1.3516 -3.7222 C.2 1 LGD 0.6709
3 N1 -1.0379 -2.2843 -3.5779 N.am 1 LGD -0.6111
4 C3 -0.8611 -3.0984 -2.3588 C.3 1 LGD 0.0628
5 C4 -2.1524 -3.8463 -1.9943 C.2 1 LGD 0.6594
6 N2 -2.7937 -4.5689 -2.9888 N.am 1 LGD -0.5843
7 C5 -3.9675 -5.4182 -2.7364 C.3 1 LGD 0.0545
8 C6 -5.2370 -4.6955 -3.2191 C.2 1 LGD 0.6603
9 N3 -5.5904 -3.5252 -2.5640 N.am 1 LGD -0.5821
10 C7 -6.7224 -2.6784 -2.9796 C.3 1 LGD 0.0639
11 C8 -6.4608 -1.2425 -2.5056 C.2 1 LGD 0.6759
12 N4 -6.2975 -1.0194 -1.1464 N.am 1 LGD -0.5950
13 C9 -5.5180 0.1129 -0.6277 C.3 1 LGD 0.0691
14 C10 -4.4949 -0.4312 0.3781 C.2 1 LGD 0.6585
15 N5 -3.1458 -0.2212 0.1301 N.am 1 LGD -0.5999
16 C11 -2.1091 -0.4730 1.1442 C.3 1 LGD 0.0679
17 C12 -0.7042 -0.4551 0.5203 C.2 1 LGD 0.6839
18 N6 -0.3309 0.5892 -0.3193 N.am 1 LGD -0.5731
19 C13 1.0884 0.9327 -0.5100 C.3 1 LGD 0.0583
20 C14 1.6285 1.5423 0.7893 C.2 1 LGD 0.6434
21 N7 2.8590 1.1029 1.2411 N.am 1 LGD -0.5807
22 C15 3.3562 1.3979 2.5940 C.3 1 LGD 0.0607
23 C16 4.1896 2.6997 2.5962 C.2 1 LGD 0.6803
24 N8 -2.3842 -1.5523 -6.1801 N.am 1 LGD -0.6203
25 O1 4.6001 3.2002 1.5609 O.2 1 LGD -0.5790
26 O2 1.0009 2.3685 1.4321 O.2 1 LGD -0.5847
27 O3 0.1005 -1.3372 0.7694 O.2 1 LGD -0.6596
28 O4 -4.8405 -1.0516 1.3707 O.2 1 LGD -0.5992
29 O5 -6.3621 -0.3124 -3.2875 O.2 1 LGD -0.5620
30 O6 -5.9242 -5.1113 -4.1376 O.2 1 LGD -0.5844
31 O7 -2.6250 -3.7952 -0.8710 O.2 1 LGD -0.5871
32 C17 4.1722 0.1668 3.0798 C.3 1 LGD -0.0882
33 C18 3.2884 -1.1105 3.2095 C.3 1 LGD -0.0752
34 C19 3.8749 -2.3371 2.4716 C.3 1 LGD -0.1053
35 C20 2.7826 -3.3830 2.1680 C.3 1 LGD 0.0877
36 N9 3.3300 -4.4175 1.2672 N.4 1 LGD -0.7435
37 O8 -2.8313 -1.1704 -2.7967 O.2 1 LGD -0.5834
38 C21 -3.4547 -2.4331 -6.2515 C.2 1 LGD 0.6527
39 C22 -3.5463 -3.3481 -7.4677 C.3 1 LGD -0.1703
40 O9 -4.2881 -2.4664 -5.3648 O.2 1 LGD -0.5644
41 C23 1.3302 1.9127 -1.6912 C.3 1 LGD -0.0792
42 C24 -2.2304 0.5880 2.2754 C.3 1 LGD -0.0483
43 C25 -6.4420 1.1918 -0.0032 C.3 1 LGD -0.0309
44 C26 0.3013 -4.1065 -2.5635 C.3 1 LGD -0.0456
45 C27 -8.0428 -3.2478 -2.4075 C.3 1 LGD 0.1212
46 C28 -3.7291 -6.7909 -3.4149 C.3 1 LGD -0.0345
47 C29 0.8920 1.4039 -3.0947 C.3 1 LGD -0.0611
48 C30 1.4996 0.0328 -3.4507 C.3 1 LGD -0.0926
49 C31 1.2682 2.4386 -4.1820 C.3 1 LGD -0.0926
50 C32 -1.1763 0.4923 3.3790 C.ar 1 LGD -0.1155
51 C33 -0.6983 1.6749 3.9678 C.ar 1 LGD -0.0734
52 C34 0.2538 1.6300 4.9963 C.ar 1 LGD -0.1962
53 C35 0.7368 0.3927 5.4695 C.ar 1 LGD 0.0675
54 C36 0.2634 -0.7896 4.8753 C.ar 1 LGD -0.1962
55 C37 -0.6943 -0.7447 3.8495 C.ar 1 LGD -0.0734
56 N10 1.7105 0.2766 6.4568 N.am 1 LGD -0.4989
57 C38 1.9764 1.1934 7.4620 C.2 1 LGD 0.7844
58 N11 1.1132 2.2086 7.8080 N.am 1 LGD -0.6936
59 O10 3.0026 1.0679 8.1008 O.2 1 LGD -0.6301
60 C39 -5.6574 2.3649 0.5893 C.ar 1 LGD -0.1222
61 C40 -5.2579 2.3376 1.9349 C.ar 1 LGD -0.0955
62 C41 -4.5019 3.3887 2.4754 C.ar 1 LGD -0.1690
63 C42 -4.1351 4.4994 1.6939 C.ar 1 LGD 0.0728
64 C43 -4.5798 4.5486 0.3505 C.ar 1 LGD -0.1690
65 C44 -5.3236 3.4839 -0.1947 C.ar 1 LGD -0.0955
66 N12 -3.3456 5.4575 2.3368 N.am 1 LGD -0.4750
67 C45 -2.6251 6.5185 1.7875 C.2 1 LGD 0.6410
68 O11 -2.7613 6.8501 0.6243 O.2 1 LGD -0.5470
69 C46 -1.6381 7.2547 2.7274 C.3 1 LGD 0.0478
70 C47 -0.5707 8.1189 1.9952 C.3 1 LGD -0.1441
71 C48 0.5874 7.2681 1.4636 C.2 1 LGD 0.6988
72 N13 0.9438 6.1161 2.1335 N.am 1 LGD -0.5925
73 C49 0.2467 5.7041 3.2487 C.2 1 LGD 0.8310
74 N14 -0.9491 6.2980 3.6120 N.am 1 LGD -0.6159
75 O12 0.6952 4.8060 3.9319 O.2 1 LGD -0.6567
76 O13 1.2238 7.5771 0.4735 O.2 1 LGD -0.5834
77 O14 -9.1490 -2.4461 -2.8124 O.3 1 LGD -0.5942
78 C50 -2.4677 -7.4607 -2.8770 C.ar 1 LGD -0.1844
79 C51 -2.4849 -8.1466 -1.6504 C.ar 1 LGD -0.0805
80 C52 -1.2884 -8.7058 -1.1770 C.ar 1 LGD -0.2423
81 C53 -0.1196 -8.5561 -1.9417 C.ar 1 LGD 0.3761
82 N15 -0.0928 -7.8954 -3.1160 N.ar 1 LGD -0.6782
83 C54 -1.2455 -7.3646 -3.5720 C.ar 1 LGD 0.3948
84 C55 1.6712 -3.4385 -2.6142 C.ar 1 LGD -0.0858
85 C56 2.1973 -2.8275 -1.4615 C.ar 1 LGD -0.1322
86 C57 3.4475 -2.1929 -1.4997 C.ar 1 LGD -0.1332
87 C58 4.1905 -2.1831 -2.6880 C.ar 1 LGD 0.0312
88 C59 3.6811 -2.8014 -3.8407 C.ar 1 LGD -0.1332
89 C60 2.4229 -3.4263 -3.8045 C.ar 1 LGD -0.1322
90 Cl1 5.7442 -1.3776 -2.7346 Cl 1 LGD -0.0740
91 C61 -3.2650 0.5188 -5.1096 C.3 1 LGD -0.0390
92 C62 -2.7851 1.8150 -4.4633 C.ar 1 LGD -0.0800
93 C63 -2.7947 1.9653 -3.0662 C.ar 1 LGD -0.1237
94 C64 -2.2085 3.0860 -2.4643 C.ar 1 LGD -0.0358
95 C65 -1.6719 4.1105 -3.2670 C.ar 1 LGD -0.0366
96 C66 -1.7404 4.0089 -4.6666 C.ar 1 LGD -0.1110
97 C67 -2.2757 2.8557 -5.2614 C.ar 1 LGD -0.1306
98 C68 -2.1051 3.1590 -1.0658 C.ar 1 LGD -0.1603
99 C69 -1.4243 4.2272 -0.4689 C.ar 1 LGD -0.1030
100 C70 -0.9001 5.2537 -1.2684 C.ar 1 LGD -0.1168
101 C71 -1.0360 5.2068 -2.6628 C.ar 1 LGD -0.1097
102 C72 2.2950 -5.3771 0.8291 C.3 1 LGD 0.1143
103 C73 1.8812 -6.3042 1.9969 C.3 1 LGD -0.1260
104 C74 2.8670 -6.1956 -0.3485 C.3 1 LGD -0.1260
105 N16 4.4993 3.2433 3.8438 N.am 1 LGD -0.5125
106 C75 5.5575 4.2494 4.0596 C.3 1 LGD 0.0548
107 C76 5.2857 4.8535 5.4586 C.3 1 LGD -0.0728
108 C77 4.4939 3.7692 6.2045 C.3 1 LGD -0.0896
109 C78 3.7685 2.9904 5.0958 C.3 1 LGD 0.0951
110 C79 6.9348 3.5595 3.9368 C.2 1 LGD 0.6518
111 O15 7.6748 3.3839 4.8911 O.2 1 LGD -0.5967
112 N17 7.3221 3.1162 2.6810 N.am 1 LGD -0.5922
113 C80 8.5386 2.3251 2.4376 C.3 1 LGD 0.0604
114 C81 8.2484 1.1705 1.4588 C.2 1 LGD 0.6491
115 N18 9.2197 0.2184 1.2363 N.am 1 LGD -0.6956
116 C82 9.6494 3.2586 1.9053 C.3 1 LGD -0.1021
117 O16 7.1874 1.0418 0.8731 O.2 1 LGD -0.6190
118 H1 -1.2035 -0.1223 -5.2414 H 1 LGD 0.0645
119 H2 -0.3936 -2.4118 -4.3441 H 1 LGD 0.3146
120 H3 -0.6213 -2.4362 -1.5187 H 1 LGD 0.0988
121 H4 -2.4214 -4.5226 -3.9256 H 1 LGD 0.3202
122 H5 -4.0870 -5.5879 -1.6590 H 1 LGD 0.0918
123 H6 -4.9808 -3.1948 -1.8286 H 1 LGD 0.3302
124 H7 -6.7831 -2.6580 -4.0757 H 1 LGD 0.1255
125 H8 -6.5149 -1.7739 -0.5115 H 1 LGD 0.3221
126 H9 -4.9591 0.5787 -1.4448 H 1 LGD 0.0839
127 H10 -2.8743 0.1365 -0.7742 H 1 LGD 0.3299
128 H11 -2.2664 -1.4749 1.5634 H 1 LGD 0.1002
129 H12 -1.0277 1.2649 -0.5926 H 1 LGD 0.3372
130 H13 1.6592 0.0151 -0.6974 H 1 LGD 0.0633
131 H14 3.3982 0.4874 0.6509 H 1 LGD 0.3135
132 H15 2.5055 1.5412 3.2716 H 1 LGD 0.0996
133 H16 -1.7243 -1.5496 -6.9439 H 1 LGD 0.3141
134 H17 5.0024 -0.0043 2.3823 H 1 LGD 0.0707
135 H18 4.6390 0.3755 4.0495 H 1 LGD 0.0707
136 H19 3.1550 -1.3557 4.2707 H 1 LGD 0.0635
137 H20 2.2817 -0.9120 2.8190 H 1 LGD 0.0635
138 H21 4.3297 -2.0156 1.5283 H 1 LGD 0.0566
139 H22 4.6743 -2.7894 3.0724 H 1 LGD 0.0566
140 H23 2.4341 -3.8416 3.0952 H 1 LGD 0.1180
141 H24 1.9380 -2.8960 1.6761 H 1 LGD 0.1180
142 H25 4.0763 -4.9152 1.7326 H 1 LGD 0.4474
143 H26 -3.5483 -2.7487 -8.3867 H 1 LGD 0.0675
144 H27 -2.6822 -4.0233 -7.4931 H 1 LGD 0.0675
145 H28 -4.4662 -3.9453 -7.4302 H 1 LGD 0.0675
146 H29 0.8183 2.8589 -1.4789 H 1 LGD 0.0690
147 H30 2.4016 2.1505 -1.7247 H 1 LGD 0.0690
148 H31 -2.1941 1.5868 1.8223 H 1 LGD 0.0723
149 H32 -3.2173 0.5038 2.7447 H 1 LGD 0.0723
150 H33 -7.1346 1.5576 -0.7723 H 1 LGD 0.0722
151 H34 -7.0662 0.7309 0.7734 H 1 LGD 0.0722
152 H35 0.2929 -4.8280 -1.7362 H 1 LGD 0.0625
153 H36 0.1239 -4.6914 -3.4750 H 1 LGD 0.0625
154 H37 -8.1797 -4.2745 -2.7694 H 1 LGD 0.0309
155 H38 -7.9864 -3.2831 -1.3122 H 1 LGD 0.0309
156 H39 -4.5981 -7.4386 -3.2409 H 1 LGD 0.0769
157 H40 -3.6535 -6.6577 -4.5023 H 1 LGD 0.0769
158 H41 -0.1964 1.2894 -3.0946 H 1 LGD 0.0543
159 H42 1.1147 -0.7378 -2.7772 H 1 LGD 0.0347
160 H43 1.2352 -0.2602 -4.4745 H 1 LGD 0.0347
161 H44 2.5932 0.0571 -3.3717 H 1 LGD 0.0347
162 H45 2.3548 2.4713 -4.3322 H 1 LGD 0.0347
163 H46 0.7974 2.1840 -5.1400 H 1 LGD 0.0347
164 H47 0.9424 3.4462 -3.8996 H 1 LGD 0.0347
165 H48 -1.0565 2.6388 3.6172 H 1 LGD 0.1417
166 H49 0.6281 2.5685 5.3866 H 1 LGD 0.1382
167 H50 0.6309 -1.7530 5.2175 H 1 LGD 0.1382
168 H51 -1.0562 -1.6772 3.4277 H 1 LGD 0.1417
169 H52 2.2366 -0.5828 6.4917 H 1 LGD 0.3373
170 H53 0.2365 2.3101 7.3193 H 1 LGD 0.3322
171 H54 1.3565 2.8309 8.5636 H 1 LGD 0.3322
172 H55 -5.5181 1.4897 2.5623 H 1 LGD 0.1475
173 H56 -4.1846 3.3294 3.5129 H 1 LGD 0.1465
174 H57 -4.3556 5.3865 -0.2979 H 1 LGD 0.1465
175 H58 -5.6347 3.5285 -1.2349 H 1 LGD 0.1475
176 H59 -3.1668 5.2828 3.3135 H 1 LGD 0.3099
177 H60 -2.2501 7.9199 3.3493 H 1 LGD 0.0888
178 H61 -1.0173 8.6953 1.1749 H 1 LGD 0.1038
179 H62 -0.1474 8.8404 2.7050 H 1 LGD 0.1038
180 H63 1.7547 5.5958 1.8370 H 1 LGD 0.3720
181 H64 -1.3800 6.0154 4.4795 H 1 LGD 0.3442
182 H65 -9.9600 -2.9013 -2.5255 H 1 LGD 0.4132
183 H66 -3.4022 -8.2378 -1.0749 H 1 LGD 0.1509
184 H67 -1.2643 -9.2435 -0.2337 H 1 LGD 0.1452
185 H68 0.8261 -8.9759 -1.6022 H 1 LGD 0.0141
186 H69 -1.1830 -6.8291 -4.5185 H 1 LGD 0.0181
187 H70 1.6273 -2.8336 -0.5402 H 1 LGD 0.1462
188 H71 3.8332 -1.6943 -0.6178 H 1 LGD 0.1505
189 H72 4.2546 -2.7889 -4.7631 H 1 LGD 0.1505
190 H73 2.0327 -3.8960 -4.7030 H 1 LGD 0.1462
191 H74 -3.5310 0.7221 -6.1551 H 1 LGD 0.0874
192 H75 -4.1883 0.1694 -4.6345 H 1 LGD 0.0874
193 H76 -3.2001 1.1855 -2.4401 H 1 LGD 0.1368
194 H77 -1.3317 4.7969 -5.2928 H 1 LGD 0.1397
195 H78 -2.2723 2.7628 -6.3437 H 1 LGD 0.1333
196 H79 -2.5321 2.3820 -0.4415 H 1 LGD 0.1270
197 H80 -1.3105 4.2617 0.6104 H 1 LGD 0.1342
198 H81 -0.3906 6.0910 -0.8103 H 1 LGD 0.1455
199 H82 -0.6184 6.0041 -3.2707 H 1 LGD 0.1420
200 H83 1.4222 -4.8211 0.4803 H 1 LGD 0.1188
201 H84 1.4129 -5.7351 2.8092 H 1 LGD 0.0734
202 H85 1.1543 -7.0520 1.6550 H 1 LGD 0.0734
203 H86 2.7507 -6.8350 2.4052 H 1 LGD 0.0734
204 H87 2.1105 -6.8847 -0.7434 H 1 LGD 0.0734
205 H88 3.1802 -5.5363 -1.1673 H 1 LGD 0.0734
206 H89 3.7378 -6.7847 -0.0337 H 1 LGD 0.0734
207 H90 5.4930 5.0315 3.2922 H 1 LGD 0.0817
208 H91 6.1971 5.1522 5.9919 H 1 LGD 0.0685
209 H92 4.6551 5.7452 5.3486 H 1 LGD 0.0685
210 H93 5.1872 3.1015 6.7324 H 1 LGD 0.0667
211 H94 3.7926 4.1922 6.9348 H 1 LGD 0.0667
212 H95 3.7473 1.9209 5.3316 H 1 LGD 0.0516
213 H96 2.7435 3.3634 4.9869 H 1 LGD 0.0516
214 H97 6.6771 3.2505 1.9130 H 1 LGD 0.3484
215 H98 8.8858 1.8664 3.3721 H 1 LGD 0.0883
216 H99 10.1110 0.2841 1.7049 H 1 LGD 0.3163
217 H100 9.0331 -0.5389 0.5961 H 1 LGD 0.3163
218 H101 9.3538 3.7135 0.9512 H 1 LGD 0.0504
219 H102 9.8523 4.0652 2.6214 H 1 LGD 0.0504
220 H103 10.5836 2.7055 1.7472 H 1 LGD 0.0504
221 H104 3.7107 -3.9619 0.4490 H 1 LGD 0.4474
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 4 5 1
5 5 6 am
6 6 7 1
7 7 8 1
8 8 9 am
9 9 10 1
10 10 11 1
11 11 12 am
12 12 13 1
13 13 14 1
14 14 15 am
15 15 16 1
16 16 17 1
17 17 18 am
18 18 19 1
19 19 20 1
20 20 21 am
21 21 22 1
22 22 23 1
23 1 24 1
24 23 25 2
25 20 26 2
26 17 27 2
27 14 28 2
28 11 29 2
29 8 30 2
30 5 31 2
31 22 32 1
32 32 33 1
33 33 34 1
34 34 35 1
35 35 36 1
36 2 37 2
37 24 38 am
38 38 39 1
39 38 40 2
40 19 41 1
41 16 42 1
42 13 43 1
43 4 44 1
44 10 45 1
45 7 46 1
46 41 47 1
47 47 48 1
48 47 49 1
49 42 50 1
50 50 51 ar
51 51 52 ar
52 52 53 ar
53 53 54 ar
54 54 55 ar
55 50 55 ar
56 53 56 1
57 56 57 am
58 57 58 am
59 57 59 2
60 43 60 1
61 60 61 ar
62 61 62 ar
63 62 63 ar
64 63 64 ar
65 64 65 ar
66 60 65 ar
67 63 66 1
68 66 67 am
69 67 68 2
70 67 69 1
71 69 70 1
72 70 71 1
73 71 72 am
74 72 73 am
75 73 74 am
76 69 74 1
77 73 75 2
78 71 76 2
79 45 77 1
80 46 78 1
81 78 79 ar
82 79 80 ar
83 80 81 ar
84 81 82 ar
85 82 83 ar
86 78 83 ar
87 44 84 1
88 84 85 ar
89 85 86 ar
90 86 87 ar
91 87 88 ar
92 88 89 ar
93 84 89 ar
94 87 90 1
95 1 91 1
96 91 92 1
97 92 93 ar
98 93 94 ar
99 94 95 ar
100 95 96 ar
101 96 97 ar
102 92 97 ar
103 94 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 95 101 ar
108 36 102 1
109 102 103 1
110 102 104 1
111 23 105 am
112 105 106 1
113 106 107 1
114 107 108 1
115 108 109 1
116 105 109 1
117 106 110 1
118 110 111 2
119 110 112 am
120 112 113 1
121 113 114 1
122 114 115 am
123 113 116 1
124 114 117 2
125 1 118 1
126 3 119 1
127 4 120 1
128 6 121 1
129 7 122 1
130 9 123 1
131 10 124 1
132 12 125 1
133 13 126 1
134 15 127 1
135 16 128 1
136 18 129 1
137 19 130 1
138 21 131 1
139 22 132 1
140 24 133 1
141 32 134 1
142 32 135 1
143 33 136 1
144 33 137 1
145 34 138 1
146 34 139 1
147 35 140 1
148 35 141 1
149 36 142 1
150 39 143 1
151 39 144 1
152 39 145 1
153 41 146 1
154 41 147 1
155 42 148 1
156 42 149 1
157 43 150 1
158 43 151 1
159 44 152 1
160 44 153 1
161 45 154 1
162 45 155 1
163 46 156 1
164 46 157 1
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166 48 159 1
167 48 160 1
168 48 161 1
169 49 162 1
170 49 163 1
171 49 164 1
172 51 165 1
173 52 166 1
174 54 167 1
175 55 168 1
176 56 169 1
177 58 170 1
178 58 171 1
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180 62 173 1
181 64 174 1
182 65 175 1
183 66 176 1
184 69 177 1
185 70 178 1
186 70 179 1
187 72 180 1
188 74 181 1
189 77 182 1
190 79 183 1
191 80 184 1
192 81 185 1
193 83 186 1
194 85 187 1
195 86 188 1
196 88 189 1
197 89 190 1
198 91 191 1
199 91 192 1
200 93 193 1
201 96 194 1
202 97 195 1
203 98 196 1
204 99 197 1
205 100 198 1
206 101 199 1
207 102 200 1
208 103 201 1
209 103 202 1
210 103 203 1
211 104 204 1
212 104 205 1
213 104 206 1
214 106 207 1
215 107 208 1
216 107 209 1
217 108 210 1
218 108 211 1
219 109 212 1
220 109 213 1
221 112 214 1
222 113 215 1
223 115 216 1
224 115 217 1
225 116 218 1
226 116 219 1
227 116 220 1
228 36 221 1